RNA–Protein interactions for RNA: ENST00000518196.5

PABPC1-205, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 3

Gene PABPC1, Length 631 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-205ENST00000518196 A0A1B0GXF2 115 aa9.05□□□□□ -0.96
PABPC1-205ENST00000518196 SH2D6Q7Z4S9 175 aa9.05□□□□□ -0.96
PABPC1-205ENST00000518196 URGCP-MRPS24S4R325 110 aa9.05□□□□□ -0.96
PABPC1-205ENST00000518196 A0A096LPF7 62 aa9.04□□□□□ -0.96
PABPC1-205ENST00000518196 LOC100131303A0A0U1RQF7 123 aa9.04□□□□□ -0.96
PABPC1-205ENST00000518196 SRIP30626 198 aa9.04□□□□□ -0.96
PABPC1-205ENST00000518196 LINC00310P59036 64 aa9.04□□□□□ -0.96
PABPC1-205ENST00000518196 SUMO4Q6EEV6 95 aa9.04□□□□□ -0.96
PABPC1-205ENST00000518196 RASL11AQ6T310 242 aa9.04□□□□□ -0.96
PABPC1-205ENST00000518196 ATRAIDQ6UW56 229 aa9.04□□□□□ -0.96
PABPC1-205ENST00000518196 FRZBQ92765 325 aa9.04□□□□□ -0.96
PABPC1-205ENST00000518196 GAGE12JA6NER3 117 aa9.03□□□□□ -0.96
PABPC1-205ENST00000518196 RAB4AP20338 218 aa9.03□□□□□ -0.96
PABPC1-205ENST00000518196 RPL36AP83881 106 aaKnown RBP9.03□□□□□ -0.96
PABPC1-205ENST00000518196 GAGE1Q13065 139 aa9.03□□□□□ -0.96
PABPC1-205ENST00000518196 GAGE4Q13068 117 aa9.03□□□□□ -0.96
PABPC1-205ENST00000518196 GAGE5Q13069 117 aa9.03□□□□□ -0.96
PABPC1-205ENST00000518196 GAGE13Q4V321 117 aa9.03□□□□□ -0.96
PABPC1-205ENST00000518196 FAM104BQ5XKR9 115 aa9.03□□□□□ -0.96
PABPC1-205ENST00000518196 NEGR1Q7Z3B1 354 aa9.03□□□□□ -0.96
PABPC1-205ENST00000518196 AMN1Q8IY45 258 aa9.03□□□□□ -0.96
PABPC1-205ENST00000518196 GATD1Q8NB37 220 aa9.03□□□□□ -0.96
PABPC1-205ENST00000518196 RPL36ALQ969Q0 106 aaKnown RBP9.03□□□□□ -0.96
PABPC1-205ENST00000518196 STARD9Q9P2P6 4700 aa9.02□□□□□ -0.97
PABPC1-205ENST00000518196 M0QY20 66 aa9.02□□□□□ -0.97
PABPC1-205ENST00000518196 P0DMU3 169 aa9.02□□□□□ -0.97
PABPC1-205ENST00000518196 FAM231AP0DMU4 169 aa9.02□□□□□ -0.97
PABPC1-205ENST00000518196 FAM231CP0DMU5 169 aa9.02□□□□□ -0.97
PABPC1-205ENST00000518196 SREK1IP1Q8N9Q2 155 aaPredicted RBP9.02□□□□□ -0.97
PABPC1-205ENST00000518196 ZNRF2Q8NHG8 242 aa9.02□□□□□ -0.97
PABPC1-205ENST00000518196 MRAP2Q96G30 205 aa9.02□□□□□ -0.97
PABPC1-205ENST00000518196 DNAJC30Q96LL9 226 aa9.02□□□□□ -0.97
PABPC1-205ENST00000518196 CSMD3Q7Z407 3707 aa9.02□□□□□ -0.97
PABPC1-205ENST00000518196 TRBV7-3A0A075B6L6 115 aa9.01□□□□□ -0.97
PABPC1-205ENST00000518196 LOC100996750A0A140TA64 210 aa9.01□□□□□ -0.97
PABPC1-205ENST00000518196 CCL18P55774 89 aa9.01□□□□□ -0.97
PABPC1-205ENST00000518196 COX19Q49B96 90 aa9.01□□□□□ -0.97
PABPC1-205ENST00000518196 NEXN-AS1Q8NBZ9 246 aa9.01□□□□□ -0.97
PABPC1-205ENST00000518196 ATP6V0E2Q8NHE4 81 aa9.01□□□□□ -0.97
PABPC1-205ENST00000518196 RNF185Q96GF1 192 aa9.01□□□□□ -0.97
PABPC1-205ENST00000518196 KRTAP4-6Q9BYQ5 205 aa9.01□□□□□ -0.97
PABPC1-205ENST00000518196 NIT2Q9NQR4 276 aa9.01□□□□□ -0.97
PABPC1-205ENST00000518196 SMCO4Q9NRQ5 59 aa9.01□□□□□ -0.97
PABPC1-205ENST00000518196 TNFRSF18Q9Y5U5 241 aa9.01□□□□□ -0.97
PABPC1-205ENST00000518196 TRAV26-2A0A0B4J265 109 aa9□□□□□ -0.97
PABPC1-205ENST00000518196 S100A1P23297 94 aa9□□□□□ -0.97
PABPC1-205ENST00000518196 PPP1R17O96001 155 aa8.99□□□□□ -0.97
PABPC1-205ENST00000518196 ELOBQ15370 118 aa8.99□□□□□ -0.97
PABPC1-205ENST00000518196 MRPL51Q4U2R6 128 aaKnown RBP8.99□□□□□ -0.97
PABPC1-205ENST00000518196 UBE2DNLQ8IWF7 75 aa8.99□□□□□ -0.97
PABPC1-205ENST00000518196 Q9UF83 564 aa8.99□□□□□ -0.97
PABPC1-205ENST00000518196 TRBV24-1A0A075B6N3 115 aa8.98□□□□□ -0.97
PABPC1-205ENST00000518196 HLA-DQA1P01909 254 aa8.98□□□□□ -0.97
PABPC1-205ENST00000518196 LINC00694P0DN24 101 aa8.98□□□□□ -0.97
PABPC1-205ENST00000518196 CKS2P33552 79 aa8.98□□□□□ -0.97
PABPC1-205ENST00000518196 UBE2D3P61077 147 aa8.98□□□□□ -0.97
PABPC1-205ENST00000518196 UBE2D2P62837 147 aa8.98□□□□□ -0.97
PABPC1-205ENST00000518196 ESRGQ1W209 222 aa8.98□□□□□ -0.97
PABPC1-205ENST00000518196 OR10J3Q5JRS4 329 aa8.98□□□□□ -0.97
PABPC1-205ENST00000518196 LGALS9CQ6DKI2 356 aa8.98□□□□□ -0.97
PABPC1-205ENST00000518196 LYPD5Q6UWN5 251 aa8.98□□□□□ -0.97
PABPC1-205ENST00000518196 TMEM136Q6ZRR5 245 aa8.98□□□□□ -0.97
PABPC1-205ENST00000518196 GNB1LQ9BYB4 327 aa8.98□□□□□ -0.97
PABPC1-205ENST00000518196 GTSF1LQ9H1H1 148 aa8.98□□□□□ -0.97
PABPC1-205ENST00000518196 DYNC2H1Q8NCM8 4307 aaKnown RBP8.98□□□□□ -0.97
PABPC1-205ENST00000518196 TGIF2-C20orf24A0A0A6YYL0 155 aa8.97□□□□□ -0.97
PABPC1-205ENST00000518196 ATP6V1G1O75348 118 aa8.97□□□□□ -0.97
PABPC1-205ENST00000518196 PPBPP02775 128 aa8.97□□□□□ -0.97
PABPC1-205ENST00000518196 TIRAPP58753 221 aa8.97□□□□□ -0.97
PABPC1-205ENST00000518196 DAZ4Q86SG3 579 aaKnown RBP8.97□□□□□ -0.97
PABPC1-205ENST00000518196 CBLN2Q8IUK8 224 aa8.97□□□□□ -0.97
PABPC1-205ENST00000518196 RPL39LQ96EH5 51 aaKnown RBP8.97□□□□□ -0.97
PABPC1-205ENST00000518196 ST20Q9HBF5 79 aa8.97□□□□□ -0.97
PABPC1-205ENST00000518196 DAZ3Q9NR90 486 aaKnown RBP8.97□□□□□ -0.97
PABPC1-205ENST00000518196 D6R8Y8 96 aa8.96□□□□□ -0.98
PABPC1-205ENST00000518196 SMKR1H3BMG3 65 aa8.96□□□□□ -0.98
PABPC1-205ENST00000518196 NCR2O95944 276 aa8.96□□□□□ -0.98
PABPC1-205ENST00000518196 APCSP02743 223 aa8.96□□□□□ -0.98
PABPC1-205ENST00000518196 MT-ND6P03923 174 aa8.96□□□□□ -0.98
PABPC1-205ENST00000518196 TMEM97Q5BJF2 176 aa8.96□□□□□ -0.98
PABPC1-205ENST00000518196 LINC00588Q9Y4M8 146 aa8.96□□□□□ -0.98
PABPC1-205ENST00000518196 TENM2Q9NT68 2774 aa8.95□□□□□ -0.98
PABPC1-205ENST00000518196 TRBV6-5A0A0K0K1A5 114 aa8.95□□□□□ -0.98
PABPC1-205ENST00000518196 LY6G6CO95867 125 aa8.95□□□□□ -0.98
PABPC1-205ENST00000518196 ORMDL3Q8N138 153 aa8.95□□□□□ -0.98
PABPC1-205ENST00000518196 LINC00476Q8WZB0 136 aa8.95□□□□□ -0.98
PABPC1-205ENST00000518196 MRPS16Q9Y3D3 137 aaKnown RBP8.95□□□□□ -0.98
PABPC1-205ENST00000518196 IGHV3-38A0A0C4DH36 116 aa8.94□□□□□ -0.98
PABPC1-205ENST00000518196 GAS8-AS1O95177 125 aa8.94□□□□□ -0.98
PABPC1-205ENST00000518196 RPS10P46783 165 aaKnown RBP8.94□□□□□ -0.98
PABPC1-205ENST00000518196 LELP1Q5T871 98 aa8.94□□□□□ -0.98
PABPC1-205ENST00000518196 PRELID3AQ96N28 172 aa8.94□□□□□ -0.98
PABPC1-205ENST00000518196 YPEL4Q96NS1 127 aa8.94□□□□□ -0.98
PABPC1-205ENST00000518196 TRAPPC1Q9Y5R8 145 aa8.94□□□□□ -0.98
PABPC1-205ENST00000518196 PLECQ15149 4684 aaKnown RBP8.93□□□□□ -0.98
PABPC1-205ENST00000518196 TRAV8-6A0A0B4J262 113 aa8.93□□□□□ -0.98
PABPC1-205ENST00000518196 SDHAF1A6NFY7 115 aa8.93□□□□□ -0.98
PABPC1-205ENST00000518196 PHOX2AO14813 284 aa8.93□□□□□ -0.98
PABPC1-205ENST00000518196 TNFRSF6BO95407 300 aa8.93□□□□□ -0.98
PABPC1-205ENST00000518196 PMCHP20382 165 aa8.93□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms