RNA–Protein interactions for RNA: ENST00000516379.1

SNORA40.13-201, Transcript of small nucleolar RNA, H/ACA box 40, humanhuman

BASIC

Gene SNORA40, Length 120 nt, Biotype snoRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORA40.13-201ENST00000516379 CLDN24A6NM45 220 aa-4.24□□□□□ -3.09
SNORA40.13-201ENST00000516379 STX19Q8N4C7 294 aa-4.24□□□□□ -3.09
SNORA40.13-201ENST00000516379 CLDN22Q8N7P3 220 aa-4.24□□□□□ -3.09
SNORA40.13-201ENST00000516379 OR5H6Q8NGV6 325 aa-4.24□□□□□ -3.09
SNORA40.13-201ENST00000516379 AMELXQ99217 191 aa-4.24□□□□□ -3.09
SNORA40.13-201ENST00000516379 C7orf50Q9BRJ6 194 aaKnown RBP-4.24□□□□□ -3.09
SNORA40.13-201ENST00000516379 IL20Q9NYY1 176 aa-4.24□□□□□ -3.09
SNORA40.13-201ENST00000516379 SPENQ96T58 3664 aaKnown RBP-4.24□□□□□ -3.09
SNORA40.13-201ENST00000516379 TULP4Q9NRJ4 1543 aa-4.25□□□□□ -3.09
SNORA40.13-201ENST00000516379 ADGBQ8N7X0 1667 aa-4.25□□□□□ -3.09
SNORA40.13-201ENST00000516379 TRAV12-3A0A0B4J271 114 aa-4.25□□□□□ -3.09
SNORA40.13-201ENST00000516379 BLCAPP62952 87 aa-4.25□□□□□ -3.09
SNORA40.13-201ENST00000516379 LOC100506127A0A0U1RQW1 187 aa-4.26□□□□□ -3.09
SNORA40.13-201ENST00000516379 FAM92AA1XBS5 289 aa-4.26□□□□□ -3.09
SNORA40.13-201ENST00000516379 Q6JHZ5 121 aa-4.26□□□□□ -3.09
SNORA40.13-201ENST00000516379 OTOSQ8NHW6 89 aa-4.26□□□□□ -3.09
SNORA40.13-201ENST00000516379 NEK7Q8TDX7 302 aa-4.26□□□□□ -3.09
SNORA40.13-201ENST00000516379 MAGI1Q96QZ7 1491 aaPredicted RBP-4.26□□□□□ -3.09
SNORA40.13-201ENST00000516379 CALB1P05937 261 aa-4.27□□□□□ -3.09
SNORA40.13-201ENST00000516379 SMIM6P0DI80 62 aa-4.27□□□□□ -3.09
SNORA40.13-201ENST00000516379 OGNP20774 298 aaKnown RBP-4.27□□□□□ -3.09
SNORA40.13-201ENST00000516379 ERG28Q9UKR5 140 aa-4.27□□□□□ -3.09
SNORA40.13-201ENST00000516379 PRELID3BQ9Y3B1 194 aa-4.27□□□□□ -3.09
SNORA40.13-201ENST00000516379 SPTAN1Q13813 2472 aaKnown RBP-4.27□□□□□ -3.09
SNORA40.13-201ENST00000516379 KNDC1Q76NI1 1749 aa-4.27□□□□□ -3.09
SNORA40.13-201ENST00000516379 TRAPPC8Q9Y2L5 1435 aa-4.28□□□□□ -3.09
SNORA40.13-201ENST00000516379 DNAH10Q8IVF4 4471 aa-4.28□□□□□ -3.09
SNORA40.13-201ENST00000516379 TRAV2A0A0B4J234 112 aa-4.28□□□□□ -3.09
SNORA40.13-201ENST00000516379 TRPC5OSA6NMA1 111 aa-4.28□□□□□ -3.09
SNORA40.13-201ENST00000516379 CKS2P33552 79 aa-4.28□□□□□ -3.09
SNORA40.13-201ENST00000516379 SLC25A26Q70HW3 274 aa-4.28□□□□□ -3.09
SNORA40.13-201ENST00000516379 OR51A4Q8NGJ6 313 aa-4.28□□□□□ -3.09
SNORA40.13-201ENST00000516379 PTH2Q96A98 100 aa-4.28□□□□□ -3.09
SNORA40.13-201ENST00000516379 PYCARDQ9ULZ3 195 aa-4.28□□□□□ -3.09
SNORA40.13-201ENST00000516379 UHRF1BP1Q6BDS2 1440 aa-4.29□□□□□ -3.1
SNORA40.13-201ENST00000516379 MUC22E2RYF6 1773 aaPredicted RBP-4.29□□□□□ -3.1
SNORA40.13-201ENST00000516379 NUP210Q8TEM1 1887 aaPredicted RBP-4.29□□□□□ -3.1
SNORA40.13-201ENST00000516379 CCDC171Q6TFL3 1326 aa-4.29□□□□□ -3.1
SNORA40.13-201ENST00000516379 MYH8P13535 1937 aa-4.29□□□□□ -3.1
SNORA40.13-201ENST00000516379 PATJQ8NI35 1801 aa-4.3□□□□□ -3.1
SNORA40.13-201ENST00000516379 TRAV16A0A0A6YYK6 109 aaPredicted RBP-4.3□□□□□ -3.1
SNORA40.13-201ENST00000516379 SKP1P63208 163 aa-4.3□□□□□ -3.1
SNORA40.13-201ENST00000516379 SMIM4Q8WVI0 70 aa-4.3□□□□□ -3.1
SNORA40.13-201ENST00000516379 AGPAT3Q9NRZ7 376 aa-4.3□□□□□ -3.1
SNORA40.13-201ENST00000516379 PRDM2Q13029 1718 aa-4.31□□□□□ -3.1
SNORA40.13-201ENST00000516379 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP-4.31□□□□□ -3.1
SNORA40.13-201ENST00000516379 MAP1LC3B2A6NCE7 125 aa-4.31□□□□□ -3.1
SNORA40.13-201ENST00000516379 HMGB3O15347 200 aaKnown RBP-4.31□□□□□ -3.1
SNORA40.13-201ENST00000516379 RPL19P84098 196 aaKnown RBP-4.31□□□□□ -3.1
SNORA40.13-201ENST00000516379 TAS2R8Q9NYW2 309 aa-4.31□□□□□ -3.1
SNORA40.13-201ENST00000516379 POLA1P09884 1462 aaPredicted RBP-4.31□□□□□ -3.1
SNORA40.13-201ENST00000516379 C9orf116Q5BN46 136 aaPredicted RBP-4.32□□□□□ -3.1
SNORA40.13-201ENST00000516379 OTORQ9NRC9 128 aa-4.32□□□□□ -3.1
SNORA40.13-201ENST00000516379 ATMQ13315 3056 aa-4.33□□□□□ -3.1
SNORA40.13-201ENST00000516379 IFNA16P05015 189 aa-4.33□□□□□ -3.1
SNORA40.13-201ENST00000516379 MRPS15P82914 257 aaKnown RBP-4.33□□□□□ -3.1
SNORA40.13-201ENST00000516379 RTL8BQ17RB0 113 aa-4.33□□□□□ -3.1
SNORA40.13-201ENST00000516379 KRTAP20-1Q3LI63 56 aa-4.33□□□□□ -3.1
SNORA40.13-201ENST00000516379 RTL8AQ9BWD3 113 aa-4.33□□□□□ -3.1
SNORA40.13-201ENST00000516379 LRTM1Q9HBL6 345 aa-4.33□□□□□ -3.1
SNORA40.13-201ENST00000516379 CHMP5Q9NZZ3 219 aa-4.33□□□□□ -3.1
SNORA40.13-201ENST00000516379 LRRC37A3O60309 1634 aa-4.33□□□□□ -3.1
SNORA40.13-201ENST00000516379 CICQ96RK0 1608 aaPredicted RBP-4.33□□□□□ -3.1
SNORA40.13-201ENST00000516379 MYOM3Q5VTT5 1437 aa-4.34□□□□□ -3.1
SNORA40.13-201ENST00000516379 TRBV7-4A0A0J9YYF1 115 aa-4.34□□□□□ -3.1
SNORA40.13-201ENST00000516379 FABP2P12104 132 aa-4.34□□□□□ -3.1
SNORA40.13-201ENST00000516379 CCL18P55774 89 aa-4.34□□□□□ -3.1
SNORA40.13-201ENST00000516379 UBE2D3P61077 147 aa-4.34□□□□□ -3.1
SNORA40.13-201ENST00000516379 NCALDP61601 193 aa-4.34□□□□□ -3.1
SNORA40.13-201ENST00000516379 UBE2D2P62837 147 aa-4.34□□□□□ -3.1
SNORA40.13-201ENST00000516379 USMG5Q96IX5 58 aa-4.34□□□□□ -3.1
SNORA40.13-201ENST00000516379 COL14A1Q05707 1796 aaKnown RBP-4.35□□□□□ -3.11
SNORA40.13-201ENST00000516379 TRBV27A0A0K0K1C4 114 aa-4.35□□□□□ -3.11
SNORA40.13-201ENST00000516379 IQCF5A8MTL0 148 aa-4.35□□□□□ -3.11
SNORA40.13-201ENST00000516379 DEXIO95424 95 aa-4.35□□□□□ -3.11
SNORA40.13-201ENST00000516379 SCGB2B2Q4G0G5 96 aa-4.35□□□□□ -3.11
SNORA40.13-201ENST00000516379 MYH2Q9UKX2 1941 aa-4.35□□□□□ -3.11
SNORA40.13-201ENST00000516379 CCDC144AA2RUR9 1427 aa-4.36□□□□□ -3.11
SNORA40.13-201ENST00000516379 H3BQV1 296 aa-4.36□□□□□ -3.11
SNORA40.13-201ENST00000516379 PGRMC1O00264 195 aaKnown RBP-4.36□□□□□ -3.11
SNORA40.13-201ENST00000516379 UBE2D1P51668 147 aa-4.36□□□□□ -3.11
SNORA40.13-201ENST00000516379 ALX1Q15699 326 aa-4.36□□□□□ -3.11
SNORA40.13-201ENST00000516379 CARD19Q96LW7 228 aa-4.36□□□□□ -3.11
SNORA40.13-201ENST00000516379 GUCA1BQ9UMX6 200 aa-4.36□□□□□ -3.11
SNORA40.13-201ENST00000516379 LINC00959A0A1B0GUT2 108 aa-4.37□□□□□ -3.11
SNORA40.13-201ENST00000516379 RIIAD1A6NNX1 92 aa-4.37□□□□□ -3.11
SNORA40.13-201ENST00000516379 DYNLRB2Q8TF09 96 aa-4.37□□□□□ -3.11
SNORA40.13-201ENST00000516379 ARHGEF12Q9NZN5 1544 aa-4.37□□□□□ -3.11
SNORA40.13-201ENST00000516379 PIPP12273 146 aaPredicted RBP-4.38□□□□□ -3.11
SNORA40.13-201ENST00000516379 CYBAP13498 195 aa-4.38□□□□□ -3.11
SNORA40.13-201ENST00000516379 TMEM97Q5BJF2 176 aa-4.38□□□□□ -3.11
SNORA40.13-201ENST00000516379 HRCT1Q6UXD1 115 aa-4.38□□□□□ -3.11
SNORA40.13-201ENST00000516379 PHB2Q99623 299 aa-4.38□□□□□ -3.11
SNORA40.13-201ENST00000516379 PAIP2Q9BPZ3 127 aaKnown RBP-4.38□□□□□ -3.11
SNORA40.13-201ENST00000516379 SIKE1Q9BRV8 207 aa-4.38□□□□□ -3.11
SNORA40.13-201ENST00000516379 TECPR2O15040 1411 aa-4.38□□□□□ -3.11
SNORA40.13-201ENST00000516379 PNMA8CA0A1B0GUJ8 204 aa-4.39□□□□□ -3.11
SNORA40.13-201ENST00000516379 F8VRH5 84 aa-4.39□□□□□ -3.11
SNORA40.13-201ENST00000516379 M0R135 149 aa-4.39□□□□□ -3.11
SNORA40.13-201ENST00000516379 NDUFC2O95298 119 aa-4.39□□□□□ -3.11
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms