RNA–Protein interactions for RNA: ENST00000515531.1

SMARCA5-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5, humanhuman

TSL 2

Gene SMARCA5, Length 529 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA5-203ENST00000515531 SPINK8P0C7L1 97 aa-0.92□□□□□ -2.56
SMARCA5-203ENST00000515531 ATP6V0E2Q8NHE4 81 aa-0.92□□□□□ -2.56
SMARCA5-203ENST00000515531 ARFGEF1Q9Y6D6 1849 aa-0.92□□□□□ -2.56
SMARCA5-203ENST00000515531 FLNBO75369 2602 aaKnown RBP-0.92□□□□□ -2.56
SMARCA5-203ENST00000515531 PTPRMP28827 1452 aa-0.92□□□□□ -2.56
SMARCA5-203ENST00000515531 LAMA2P24043 3122 aaKnown RBP-0.93□□□□□ -2.56
SMARCA5-203ENST00000515531 SIPA1L3O60292 1781 aaPredicted RBP-0.93□□□□□ -2.56
SMARCA5-203ENST00000515531 TGP01266 2768 aa-0.93□□□□□ -2.56
SMARCA5-203ENST00000515531 XIRP1Q702N8 1843 aaKnown RBP-0.93□□□□□ -2.56
SMARCA5-203ENST00000515531 SMIM24O75264 130 aa-0.93□□□□□ -2.56
SMARCA5-203ENST00000515531 S100GP29377 79 aa-0.93□□□□□ -2.56
SMARCA5-203ENST00000515531 CENPHQ9H3R5 247 aa-0.93□□□□□ -2.56
SMARCA5-203ENST00000515531 DNAJC15Q9Y5T4 150 aa-0.93□□□□□ -2.56
SMARCA5-203ENST00000515531 V9GYQ6 96 aa-0.93□□□□□ -2.56
SMARCA5-203ENST00000515531 GOLGA3Q08378 1498 aa-0.93□□□□□ -2.56
SMARCA5-203ENST00000515531 CSPG4Q6UVK1 2322 aa-0.94□□□□□ -2.56
SMARCA5-203ENST00000515531 TRGV1A0A0A0MS02 117 aa-0.94□□□□□ -2.56
SMARCA5-203ENST00000515531 J3KT08 172 aa-0.94□□□□□ -2.56
SMARCA5-203ENST00000515531 C20orf197Q8N268 126 aa-0.94□□□□□ -2.56
SMARCA5-203ENST00000515531 BANF2Q9H503 90 aa-0.94□□□□□ -2.56
SMARCA5-203ENST00000515531 SMPXQ9UHP9 88 aa-0.94□□□□□ -2.56
SMARCA5-203ENST00000515531 MUC17Q685J3 4493 aa-0.95□□□□□ -2.56
SMARCA5-203ENST00000515531 CCDC179H3BU77 68 aa-0.95□□□□□ -2.56
SMARCA5-203ENST00000515531 YPEL1O60688 119 aa-0.95□□□□□ -2.56
SMARCA5-203ENST00000515531 NPC2P61916 151 aa-0.95□□□□□ -2.56
SMARCA5-203ENST00000515531 RBM3P98179 157 aaKnown RBP-0.95□□□□□ -2.56
SMARCA5-203ENST00000515531 TFAMQ00059 246 aaKnown RBP-0.95□□□□□ -2.56
SMARCA5-203ENST00000515531 SPAG11BQ08648 103 aa-0.95□□□□□ -2.56
SMARCA5-203ENST00000515531 MXRA5Q9NR99 2828 aa-0.96□□□□□ -2.56
SMARCA5-203ENST00000515531 DNHD1Q96M86 4753 aa-0.96□□□□□ -2.56
SMARCA5-203ENST00000515531 TRBV10-3A0A0K0K1G6 114 aa-0.96□□□□□ -2.56
SMARCA5-203ENST00000515531 MT-ND4LP03901 98 aa-0.96□□□□□ -2.56
SMARCA5-203ENST00000515531 HLA-DRB4P13762 266 aa-0.96□□□□□ -2.56
SMARCA5-203ENST00000515531 SPCS2Q15005 226 aa-0.96□□□□□ -2.56
SMARCA5-203ENST00000515531 HLA-DRB4X5D2U9 266 aa-0.96□□□□□ -2.56
SMARCA5-203ENST00000515531 ABCA13Q86UQ4 5058 aa-0.96□□□□□ -2.56
SMARCA5-203ENST00000515531 ATRQ13535 2644 aa-0.97□□□□□ -2.56
SMARCA5-203ENST00000515531 PBRM1Q86U86 1689 aa-0.97□□□□□ -2.56
SMARCA5-203ENST00000515531 PIN1P1O15428 100 aa-0.97□□□□□ -2.56
SMARCA5-203ENST00000515531 Q8IZM0 81 aa-0.97□□□□□ -2.56
SMARCA5-203ENST00000515531 SKA2Q8WVK7 121 aaPredicted RBP-0.97□□□□□ -2.56
SMARCA5-203ENST00000515531 WNK3Q9BYP7 1800 aa-0.97□□□□□ -2.56
SMARCA5-203ENST00000515531 ITPR3Q14573 2671 aa-0.97□□□□□ -2.57
SMARCA5-203ENST00000515531 SPTA1P02549 2419 aa-0.97□□□□□ -2.57
SMARCA5-203ENST00000515531 DNAH6Q9C0G6 4158 aa-0.97□□□□□ -2.57
SMARCA5-203ENST00000515531 DNAH3Q8TD57 4116 aa-0.98□□□□□ -2.57
SMARCA5-203ENST00000515531 PKHD1L1Q86WI1 4243 aa-0.98□□□□□ -2.57
SMARCA5-203ENST00000515531 TRAV22A0A0B4J277 110 aa-0.98□□□□□ -2.57
SMARCA5-203ENST00000515531 G3V318 75 aa-0.98□□□□□ -2.57
SMARCA5-203ENST00000515531 J3QLW9 94 aa-0.98□□□□□ -2.57
SMARCA5-203ENST00000515531 SPRR1AP35321 89 aa-0.98□□□□□ -2.57
SMARCA5-203ENST00000515531 SPRR2BP35325 72 aa-0.98□□□□□ -2.57
SMARCA5-203ENST00000515531 ATP11AUNQ6ZP68 121 aa-0.98□□□□□ -2.57
SMARCA5-203ENST00000515531 MAGOHBQ96A72 148 aaKnown RBP-0.98□□□□□ -2.57
SMARCA5-203ENST00000515531 EPG5Q9HCE0 2579 aa-0.98□□□□□ -2.57
SMARCA5-203ENST00000515531 TRAV12-3A0A0B4J271 114 aa-0.99□□□□□ -2.57
SMARCA5-203ENST00000515531 FABP1P07148 127 aa-0.99□□□□□ -2.57
SMARCA5-203ENST00000515531 CLLU1Q5K131 121 aa-0.99□□□□□ -2.57
SMARCA5-203ENST00000515531 TEP1Q99973 2627 aaKnown RBP-0.99□□□□□ -2.57
SMARCA5-203ENST00000515531 PLXNB2O15031 1838 aa-0.99□□□□□ -2.57
SMARCA5-203ENST00000515531 GVINP1Q7Z2Y8 2422 aa-0.99□□□□□ -2.57
SMARCA5-203ENST00000515531 TNRC18O15417 2968 aaPredicted RBP-0.99□□□□□ -2.57
SMARCA5-203ENST00000515531 RPS28P62857 69 aaKnown RBP-1□□□□□ -2.57
SMARCA5-203ENST00000515531 TMEM244Q5VVB8 128 aa-1□□□□□ -2.57
SMARCA5-203ENST00000515531 IFT172Q9UG01 1749 aa-1.01□□□□□ -2.57
SMARCA5-203ENST00000515531 MYH13Q9UKX3 1938 aa-1.01□□□□□ -2.57
SMARCA5-203ENST00000515531 USF3Q68DE3 2245 aa-1.01□□□□□ -2.57
SMARCA5-203ENST00000515531 KRTAP6-2Q3LI66 62 aa-1.01□□□□□ -2.57
SMARCA5-203ENST00000515531 MUC22E2RYF6 1773 aaPredicted RBP-1.01□□□□□ -2.57
SMARCA5-203ENST00000515531 KDM3BQ7LBC6 1761 aa-1.01□□□□□ -2.57
SMARCA5-203ENST00000515531 DNAH2Q9P225 4427 aa-1.01□□□□□ -2.57
SMARCA5-203ENST00000515531 TRAV36DV7A0A075B6V5 113 aa-1.02□□□□□ -2.57
SMARCA5-203ENST00000515531 TRAV1-2A0A0B4J238 106 aa-1.02□□□□□ -2.57
SMARCA5-203ENST00000515531 M0R2P5 195 aa-1.02□□□□□ -2.57
SMARCA5-203ENST00000515531 EDDM3BP56851 147 aa-1.02□□□□□ -2.57
SMARCA5-203ENST00000515531 Q5VV11 94 aa-1.02□□□□□ -2.57
SMARCA5-203ENST00000515531 NIPBLQ6KC79 2804 aaeCLIP-1.02□□□□□ -2.57
SMARCA5-203ENST00000515531 WFDC6Q9BQY6 131 aa-1.02□□□□□ -2.57
SMARCA5-203ENST00000515531 SPCS1Q9Y6A9 102 aa-1.02□□□□□ -2.57
SMARCA5-203ENST00000515531 BCL9LQ86UU0 1499 aa-1.03□□□□□ -2.57
SMARCA5-203ENST00000515531 TCTE3Q8IZS6 198 aa-1.03□□□□□ -2.57
SMARCA5-203ENST00000515531 MYO7BQ6PIF6 2116 aa-1.03□□□□□ -2.57
SMARCA5-203ENST00000515531 FASNP49327 2511 aaKnown RBP-1.04□□□□□ -2.58
SMARCA5-203ENST00000515531 ZNF609O15014 1411 aa-1.04□□□□□ -2.58
SMARCA5-203ENST00000515531 PLECQ15149 4684 aaKnown RBP-1.04□□□□□ -2.58
SMARCA5-203ENST00000515531 TSTD3H0UI37 97 aa-1.04□□□□□ -2.58
SMARCA5-203ENST00000515531 CMPK1P30085 196 aa-1.04□□□□□ -2.58
SMARCA5-203ENST00000515531 DDA1Q9BW61 102 aa-1.04□□□□□ -2.58
SMARCA5-203ENST00000515531 CELSR3Q9NYQ7 3312 aa-1.04□□□□□ -2.58
SMARCA5-203ENST00000515531 ZMYM4Q5VZL5 1548 aa-1.05□□□□□ -2.58
SMARCA5-203ENST00000515531 LAMA3Q16787 3333 aa-1.05□□□□□ -2.58
SMARCA5-203ENST00000515531 IBTKQ9P2D0 1353 aaPredicted RBP-1.05□□□□□ -2.58
SMARCA5-203ENST00000515531 MYO18BQ8IUG5 2567 aa-1.05□□□□□ -2.58
SMARCA5-203ENST00000515531 CHD8Q9HCK8 2581 aa-1.05□□□□□ -2.58
SMARCA5-203ENST00000515531 SPRR2EP22531 72 aa-1.05□□□□□ -2.58
SMARCA5-203ENST00000515531 A0A1B0GX51 115 aa-1.06□□□□□ -2.58
SMARCA5-203ENST00000515531 TNFSF15O95150 251 aa-1.06□□□□□ -2.58
SMARCA5-203ENST00000515531 SCTP09683 121 aa-1.06□□□□□ -2.58
SMARCA5-203ENST00000515531 LINC01545Q5VT33 79 aa-1.06□□□□□ -2.58
SMARCA5-203ENST00000515531 SMIM15Q7Z3B0 74 aa-1.06□□□□□ -2.58
Retrieved 100 of 20,778 RNA–protein pairs in 67 ms