RNA–Protein interactions for RNA: ENST00000515223.1

TRIM41-207, Transcript of tripartite motif containing 41, humanhuman

TSL 2

Gene TRIM41, Length 5,707 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM41-207ENST00000515223 ZFP2Q6ZN57 461 aa12.32□□□□□ -0.44
TRIM41-207ENST00000515223 NUP210LQ5VU65 1888 aa12.31□□□□□ -0.44
TRIM41-207ENST00000515223 H3BQ85 93 aa12.31□□□□□ -0.44
TRIM41-207ENST00000515223 LINC01545Q5VT33 79 aa12.31□□□□□ -0.44
TRIM41-207ENST00000515223 CITED1Q99966 193 aa12.31□□□□□ -0.44
TRIM41-207ENST00000515223 TMEM263Q8WUH6 116 aaKnown RBP12.31□□□□□ -0.44
TRIM41-207ENST00000515223 A0A1W2PNU3 283 aaPredicted RBP12.31□□□□□ -0.44
TRIM41-207ENST00000515223 C9orf47Q6ZRZ4 202 aa12.31□□□□□ -0.44
TRIM41-207ENST00000515223 TECTAO75443 2155 aa12.3□□□□□ -0.44
TRIM41-207ENST00000515223 A0A0J9YXV3 536 aa12.3□□□□□ -0.44
TRIM41-207ENST00000515223 SHISA2Q6UWI4 295 aa12.3□□□□□ -0.44
TRIM41-207ENST00000515223 WI2-2373I1.2A0A1W2PRP0 233 aa12.3□□□□□ -0.44
TRIM41-207ENST00000515223 E7EUB6 86 aa12.3□□□□□ -0.44
TRIM41-207ENST00000515223 SORL1Q92673 2214 aa12.29□□□□□ -0.44
TRIM41-207ENST00000515223 BRWD1-AS2P59051 145 aa12.29□□□□□ -0.44
TRIM41-207ENST00000515223 C12orf74Q32Q52 190 aa12.29□□□□□ -0.44
TRIM41-207ENST00000515223 PCDH15Q96QU1 1955 aa12.29□□□□□ -0.44
TRIM41-207ENST00000515223 TTTY13Q9BZ97 58 aa12.29□□□□□ -0.44
TRIM41-207ENST00000515223 ANKRD29Q8N6D5 301 aa12.28□□□□□ -0.44
TRIM41-207ENST00000515223 TEX22C9J3V5 150 aa12.28□□□□□ -0.44
TRIM41-207ENST00000515223 FREM1Q5H8C1 2179 aa12.28□□□□□ -0.44
TRIM41-207ENST00000515223 P0C879 139 aa12.28□□□□□ -0.44
TRIM41-207ENST00000515223 MED14OSP0DP75 135 aa12.28□□□□□ -0.44
TRIM41-207ENST00000515223 HILS1P60008 231 aa12.28□□□□□ -0.44
TRIM41-207ENST00000515223 IGHV4-28A0A0C4DH34 117 aa12.27□□□□□ -0.44
TRIM41-207ENST00000515223 MSRB1Q9NZV6 116 aa12.27□□□□□ -0.44
TRIM41-207ENST00000515223 INAFM1C9JVW0 142 aa12.27□□□□□ -0.45
TRIM41-207ENST00000515223 CHKB-CPT1BH3BT56 60 aa12.27□□□□□ -0.45
TRIM41-207ENST00000515223 LTBP2Q14767 1821 aa12.27□□□□□ -0.45
TRIM41-207ENST00000515223 CRYBA4P53673 196 aa12.26□□□□□ -0.45
TRIM41-207ENST00000515223 TP53TG3Q9ULZ0 132 aa12.26□□□□□ -0.45
TRIM41-207ENST00000515223 ADAMTS9Q9P2N4 1935 aa12.26□□□□□ -0.45
TRIM41-207ENST00000515223 WFDC11Q8NEX6 87 aa12.26□□□□□ -0.45
TRIM41-207ENST00000515223 A0A0J9YX75 114 aa12.25□□□□□ -0.45
TRIM41-207ENST00000515223 PRAC2D3DTV9 90 aa12.25□□□□□ -0.45
TRIM41-207ENST00000515223 LMO4P61968 165 aa12.25□□□□□ -0.45
TRIM41-207ENST00000515223 NTN5Q8WTR8 489 aaPredicted RBP12.25□□□□□ -0.45
TRIM41-207ENST00000515223 TRBV10-1A0A0K0K1A3 114 aa12.25□□□□□ -0.45
TRIM41-207ENST00000515223 GDF5OSQ5U4N7 250 aa12.25□□□□□ -0.45
TRIM41-207ENST00000515223 SPATA25Q9BR10 227 aa12.25□□□□□ -0.45
TRIM41-207ENST00000515223 MAP6D1Q9H9H5 199 aa12.25□□□□□ -0.45
TRIM41-207ENST00000515223 IGHV4-31P0DP07 118 aa12.25□□□□□ -0.45
TRIM41-207ENST00000515223 B9D2Q9BPU9 175 aa12.24□□□□□ -0.45
TRIM41-207ENST00000515223 NREPQ16612 68 aa12.24□□□□□ -0.45
TRIM41-207ENST00000515223 IGLV2-8P01709 118 aa12.24□□□□□ -0.45
TRIM41-207ENST00000515223 FXYD2P54710 66 aa12.23□□□□□ -0.45
TRIM41-207ENST00000515223 WISP2O76076 250 aa12.23□□□□□ -0.45
TRIM41-207ENST00000515223 MP68P56378 58 aa12.23□□□□□ -0.45
TRIM41-207ENST00000515223 DOPEY1Q5JWR5 2465 aa12.23□□□□□ -0.45
TRIM41-207ENST00000515223 DIRC1Q969H9 104 aa12.23□□□□□ -0.45
TRIM41-207ENST00000515223 SMIM9A6NGZ8 99 aa12.22□□□□□ -0.45
TRIM41-207ENST00000515223 PROP1O75360 226 aa12.22□□□□□ -0.45
TRIM41-207ENST00000515223 UNQ9165/PRO28630Q6UXU0 137 aa12.22□□□□□ -0.45
TRIM41-207ENST00000515223 Q6YL49 198 aa12.22□□□□□ -0.45
TRIM41-207ENST00000515223 C19orf84I3L1E1 186 aa12.22□□□□□ -0.45
TRIM41-207ENST00000515223 NCR3O14931 201 aa12.22□□□□□ -0.45
TRIM41-207ENST00000515223 NCKAP5O14513 1909 aa12.22□□□□□ -0.45
TRIM41-207ENST00000515223 MSMPQ1L6U9 139 aa12.21□□□□□ -0.45
TRIM41-207ENST00000515223 LINC00322Q6ZN03 302 aaPredicted RBP12.21□□□□□ -0.45
TRIM41-207ENST00000515223 C1orf229Q6ZS94 237 aaPredicted RBP12.21□□□□□ -0.46
TRIM41-207ENST00000515223 IGKV2-24A0A0C4DH68 120 aa12.21□□□□□ -0.46
TRIM41-207ENST00000515223 TRBV12-3P01733 135 aa12.21□□□□□ -0.46
TRIM41-207ENST00000515223 A0A1B0GX51 115 aa12.2□□□□□ -0.46
TRIM41-207ENST00000515223 PIEZO1Q92508 2521 aa12.2□□□□□ -0.46
TRIM41-207ENST00000515223 TRAV26-1A0A087WT03 109 aa12.2□□□□□ -0.46
TRIM41-207ENST00000515223 LYRM9A8MSI8 78 aa12.2□□□□□ -0.46
TRIM41-207ENST00000515223 DEFB131BA0A096LNP1 70 aa12.2□□□□□ -0.46
TRIM41-207ENST00000515223 ACYP1P07311 99 aa12.2□□□□□ -0.46
TRIM41-207ENST00000515223 RPL39P62891 51 aaKnown RBP12.2□□□□□ -0.46
TRIM41-207ENST00000515223 MUSTN1Q8IVN3 82 aa12.19□□□□□ -0.46
TRIM41-207ENST00000515223 MUC22E2RYF6 1773 aaPredicted RBP12.19□□□□□ -0.46
TRIM41-207ENST00000515223 ZNF843Q8N446 348 aa12.19□□□□□ -0.46
TRIM41-207ENST00000515223 WFDC2Q14508 124 aa12.19□□□□□ -0.46
TRIM41-207ENST00000515223 RS1O15537 224 aa12.18□□□□□ -0.46
TRIM41-207ENST00000515223 DEFB1P60022 68 aa12.18□□□□□ -0.46
TRIM41-207ENST00000515223 MDFICQ9P1T7 246 aa12.18□□□□□ -0.46
TRIM41-207ENST00000515223 FAM222AQ5U5X8 452 aa12.18□□□□□ -0.46
TRIM41-207ENST00000515223 RBM3P98179 157 aaKnown RBP12.18□□□□□ -0.46
TRIM41-207ENST00000515223 TMEM258P61165 79 aa12.17□□□□□ -0.46
TRIM41-207ENST00000515223 A4D1N5 150 aa12.17□□□□□ -0.46
TRIM41-207ENST00000515223 HIVEP3Q5T1R4 2406 aa12.17□□□□□ -0.46
TRIM41-207ENST00000515223 IGKV1D-37A0A075B6S9 117 aa12.17□□□□□ -0.46
TRIM41-207ENST00000515223 C19orf71A6NCJ1 209 aa12.17□□□□□ -0.46
TRIM41-207ENST00000515223 EIF4EBP1Q13541 118 aaPredicted RBP12.17□□□□□ -0.46
TRIM41-207ENST00000515223 SPATA12Q7Z6I5 190 aa12.17□□□□□ -0.46
TRIM41-207ENST00000515223 CCDC168Q8NDH2 2452 aa12.17□□□□□ -0.46
TRIM41-207ENST00000515223 LGALS9O00182 355 aa12.16□□□□□ -0.46
TRIM41-207ENST00000515223 KIR2DL5BQ8NHK3 375 aa12.16□□□□□ -0.46
TRIM41-207ENST00000515223 HIGD2BQ4VC39 106 aa12.16□□□□□ -0.46
TRIM41-207ENST00000515223 A0A1B0GXF2 115 aa12.16□□□□□ -0.46
TRIM41-207ENST00000515223 ODF3BA8MYP8 253 aa12.16□□□□□ -0.46
TRIM41-207ENST00000515223 JMJD7-PLA2G4BH0Y9G9 81 aa12.16□□□□□ -0.46
TRIM41-207ENST00000515223 IGF1P05019 195 aa12.15□□□□□ -0.46
TRIM41-207ENST00000515223 CRYGDP07320 174 aa12.15□□□□□ -0.46
TRIM41-207ENST00000515223 CTRLP40313 264 aa12.15□□□□□ -0.46
TRIM41-207ENST00000515223 MED12LQ86YW9 2145 aa12.15□□□□□ -0.46
TRIM41-207ENST00000515223 TOMM6Q96B49 74 aa12.15□□□□□ -0.46
TRIM41-207ENST00000515223 NAV2Q8IVL1 2488 aa12.15□□□□□ -0.47
TRIM41-207ENST00000515223 TRBV6-1A0A0K0K1D8 114 aa12.14□□□□□ -0.47
TRIM41-207ENST00000515223 MIR7-3HGQ8N6C7 128 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 57.1 ms