RNA–Protein interactions for RNA: ENST00000514934.1

SGCA-211, Transcript of sarcoglycan alpha, humanhuman

TSL 4

Gene SGCA, Length 542 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCA-211ENST00000514934 RAB4BP61018 213 aa9.67□□□□□ -0.86
SGCA-211ENST00000514934 CENPWQ5EE01 88 aa9.67□□□□□ -0.86
SGCA-211ENST00000514934 ATRAIDQ6UW56 229 aa9.67□□□□□ -0.86
SGCA-211ENST00000514934 FAM30AQ9NZY2 134 aa9.67□□□□□ -0.86
SGCA-211ENST00000514934 MUC21A0A0G2JKD1 596 aa9.66□□□□□ -0.86
SGCA-211ENST00000514934 MUC21A0A140T8X8 626 aa9.66□□□□□ -0.86
SGCA-211ENST00000514934 C10orf91Q5T1B1 145 aa9.66□□□□□ -0.86
SGCA-211ENST00000514934 SEC11CQ9BY50 192 aa9.66□□□□□ -0.86
SGCA-211ENST00000514934 IGLV5-52A0A0A0MRZ9 124 aa9.65□□□□□ -0.86
SGCA-211ENST00000514934 PSCAO43653 123 aa9.65□□□□□ -0.86
SGCA-211ENST00000514934 SCO1O75880 301 aa9.65□□□□□ -0.86
SGCA-211ENST00000514934 GZMBP10144 247 aa9.65□□□□□ -0.86
SGCA-211ENST00000514934 HAMPP81172 84 aa9.65□□□□□ -0.86
SGCA-211ENST00000514934 Q6ZSA8 131 aa9.65□□□□□ -0.86
SGCA-211ENST00000514934 PKHD1L1Q86WI1 4243 aa9.65□□□□□ -0.86
SGCA-211ENST00000514934 TRAV8-3A0A0A6YYJ7 113 aa9.64□□□□□ -0.87
SGCA-211ENST00000514934 RBFOX3A6NFN3 312 aa9.64□□□□□ -0.87
SGCA-211ENST00000514934 APOC3P02656 99 aa9.64□□□□□ -0.87
SGCA-211ENST00000514934 MEF2BQ02080 365 aaPredicted RBP9.64□□□□□ -0.87
SGCA-211ENST00000514934 NTM-AS1Q6ZSK4 140 aa9.64□□□□□ -0.87
SGCA-211ENST00000514934 SVBPQ8N300 66 aa9.64□□□□□ -0.87
SGCA-211ENST00000514934 TMEM70Q9BUB7 260 aa9.64□□□□□ -0.87
SGCA-211ENST00000514934 VAX2Q9UIW0 290 aa9.64□□□□□ -0.87
SGCA-211ENST00000514934 CARHSP1Q9Y2V2 147 aaKnown RBP9.64□□□□□ -0.87
SGCA-211ENST00000514934 TRBV6-8A0A0A6YYG3 113 aa9.63□□□□□ -0.87
SGCA-211ENST00000514934 EPM2AB3EWF7 344 aa9.63□□□□□ -0.87
SGCA-211ENST00000514934 BCL2P10415 239 aa9.63□□□□□ -0.87
SGCA-211ENST00000514934 RPL36AP83881 106 aaKnown RBP9.63□□□□□ -0.87
SGCA-211ENST00000514934 RPL36ALQ969Q0 106 aaKnown RBP9.63□□□□□ -0.87
SGCA-211ENST00000514934 SMIM12Q96EX1 92 aa9.63□□□□□ -0.87
SGCA-211ENST00000514934 CHCHD7Q9BUK0 85 aa9.63□□□□□ -0.87
SGCA-211ENST00000514934 TM2D2Q9BX73 214 aa9.63□□□□□ -0.87
SGCA-211ENST00000514934 EIF5A2Q9GZV4 153 aaKnown RBP9.63□□□□□ -0.87
SGCA-211ENST00000514934 LECT2O14960 151 aa9.62□□□□□ -0.87
SGCA-211ENST00000514934 Q5VSD8 79 aa9.62□□□□□ -0.87
SGCA-211ENST00000514934 KLK12Q9UKR0 248 aa9.62□□□□□ -0.87
SGCA-211ENST00000514934 ZNF56Q15929 161 aa9.61□□□□□ -0.87
SGCA-211ENST00000514934 MPV17L2Q567V2 206 aa9.61□□□□□ -0.87
SGCA-211ENST00000514934 ENHOQ6UWT2 76 aa9.61□□□□□ -0.87
SGCA-211ENST00000514934 BAALCQ8WXS3 180 aa9.61□□□□□ -0.87
SGCA-211ENST00000514934 LRP1Q07954 4544 aaKnown RBP9.6□□□□□ -0.87
SGCA-211ENST00000514934 TMEM250H0YL14 139 aa9.6□□□□□ -0.87
SGCA-211ENST00000514934 M0QY20 66 aa9.6□□□□□ -0.87
SGCA-211ENST00000514934 PDE6DO43924 150 aa9.6□□□□□ -0.87
SGCA-211ENST00000514934 SNAPINO95295 136 aa9.6□□□□□ -0.87
SGCA-211ENST00000514934 SMR3BP02814 79 aaPredicted RBP9.6□□□□□ -0.87
SGCA-211ENST00000514934 FAM74A3Q4VXF1 159 aa9.6□□□□□ -0.87
SGCA-211ENST00000514934 SPANXN1Q5VSR9 72 aa9.6□□□□□ -0.87
SGCA-211ENST00000514934 KRTAP26-1Q6PEX3 210 aa9.6□□□□□ -0.87
SGCA-211ENST00000514934 SREK1IP1Q8N9Q2 155 aaPredicted RBP9.6□□□□□ -0.87
SGCA-211ENST00000514934 F8W036 122 aa9.59□□□□□ -0.87
SGCA-211ENST00000514934 K7EN84 100 aa9.59□□□□□ -0.87
SGCA-211ENST00000514934 CTRLP40313 264 aa9.59□□□□□ -0.87
SGCA-211ENST00000514934 GNG4P50150 75 aa9.59□□□□□ -0.87
SGCA-211ENST00000514934 FER1L6-AS1Q8NA97 138 aa9.59□□□□□ -0.87
SGCA-211ENST00000514934 OR2D3Q8NGH3 330 aa9.59□□□□□ -0.87
SGCA-211ENST00000514934 AP1S3Q96PC3 154 aa9.59□□□□□ -0.87
SGCA-211ENST00000514934 CNFNQ9BYD5 112 aa9.59□□□□□ -0.87
SGCA-211ENST00000514934 FAT3Q8TDW7 4589 aa9.59□□□□□ -0.87
SGCA-211ENST00000514934 LOC105371267A0A1B0GV96 52 aa9.58□□□□□ -0.88
SGCA-211ENST00000514934 SSTP61278 116 aa9.58□□□□□ -0.88
SGCA-211ENST00000514934 UBE2WQ96B02 151 aa9.58□□□□□ -0.88
SGCA-211ENST00000514934 RPS20P60866 119 aaKnown RBP9.57□□□□□ -0.88
SGCA-211ENST00000514934 LINC01620Q4KN68 170 aa9.57□□□□□ -0.88
SGCA-211ENST00000514934 SUMO4Q6EEV6 95 aa9.57□□□□□ -0.88
SGCA-211ENST00000514934 PRR34Q9NV39 138 aa9.57□□□□□ -0.88
SGCA-211ENST00000514934 COX11Q9Y6N1 276 aa9.57□□□□□ -0.88
SGCA-211ENST00000514934 IGLV2-33A0A075B6J2 118 aaPredicted RBP9.56□□□□□ -0.88
SGCA-211ENST00000514934 IGKV2D-24A0A075B6R9 120 aa9.56□□□□□ -0.88
SGCA-211ENST00000514934 A0A087WX48 190 aa9.56□□□□□ -0.88
SGCA-211ENST00000514934 PNRC1Q12796 327 aaPredicted RBP9.56□□□□□ -0.88
SGCA-211ENST00000514934 IQCJQ1A5X6 159 aa9.56□□□□□ -0.88
SGCA-211ENST00000514934 LYZL1Q6UWQ5 148 aa9.56□□□□□ -0.88
SGCA-211ENST00000514934 Q8N976 141 aa9.56□□□□□ -0.88
SGCA-211ENST00000514934 CLRN3Q8NCR9 226 aa9.56□□□□□ -0.88
SGCA-211ENST00000514934 NUDT10Q8NFP7 164 aa9.56□□□□□ -0.88
SGCA-211ENST00000514934 NUDT11Q96G61 164 aa9.56□□□□□ -0.88
SGCA-211ENST00000514934 URGCP-MRPS24S4R325 110 aa9.56□□□□□ -0.88
SGCA-211ENST00000514934 F5H697 171 aa9.55□□□□□ -0.88
SGCA-211ENST00000514934 P01737 135 aa9.55□□□□□ -0.88
SGCA-211ENST00000514934 SRP19P09132 144 aaKnown RBP9.55□□□□□ -0.88
SGCA-211ENST00000514934 CACNG7P62955 275 aa9.55□□□□□ -0.88
SGCA-211ENST00000514934 SRSF3P84103 164 aaKnown RBP9.55□□□□□ -0.88
SGCA-211ENST00000514934 OCC1Q8TAD7 63 aa9.55□□□□□ -0.88
SGCA-211ENST00000514934 F2Z2F3 143 aa9.54□□□□□ -0.88
SGCA-211ENST00000514934 INAFM2P0DMQ5 153 aa9.54□□□□□ -0.88
SGCA-211ENST00000514934 ADCYAP1P18509 176 aa9.54□□□□□ -0.88
SGCA-211ENST00000514934 KRTAP10-4P60372 401 aaPredicted RBP9.54□□□□□ -0.88
SGCA-211ENST00000514934 RBX1P62877 108 aa9.54□□□□□ -0.88
SGCA-211ENST00000514934 ELOBQ15370 118 aa9.54□□□□□ -0.88
SGCA-211ENST00000514934 WDR73Q6P4I2 378 aa9.54□□□□□ -0.88
SGCA-211ENST00000514934 GTSF1Q8WW33 167 aa9.54□□□□□ -0.88
SGCA-211ENST00000514934 FRZBQ92765 325 aa9.54□□□□□ -0.88
SGCA-211ENST00000514934 RMI2Q96E14 147 aa9.54□□□□□ -0.88
SGCA-211ENST00000514934 RNASE7Q9H1E1 156 aaKnown RBP9.54□□□□□ -0.88
SGCA-211ENST00000514934 NTF3P20783 257 aa9.53□□□□□ -0.88
SGCA-211ENST00000514934 Q0VG73 95 aa9.53□□□□□ -0.88
SGCA-211ENST00000514934 RHEBQ15382 184 aa9.53□□□□□ -0.88
SGCA-211ENST00000514934 C15orf54Q8N8G6 183 aa9.53□□□□□ -0.88
SGCA-211ENST00000514934 DAZAP1Q96EP5 407 aaKnown RBP9.53□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms