RNA–Protein interactions for RNA: ENST00000514778.1

SMAD1-213, Transcript of SMAD family member 1, humanhuman

TSL 4

Gene SMAD1, Length 616 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-213ENST00000514778 DNAJC30Q96LL9 226 aa4.92□□□□□ -1.62
SMAD1-213ENST00000514778 UPK3BQ9BT76 320 aa4.92□□□□□ -1.62
SMAD1-213ENST00000514778 SAMD10Q9BYL1 202 aa4.92□□□□□ -1.62
SMAD1-213ENST00000514778 JPT2Q9H910 190 aa4.92□□□□□ -1.62
SMAD1-213ENST00000514778 TRBV7-3A0A075B6L6 115 aa4.91□□□□□ -1.62
SMAD1-213ENST00000514778 TRAV9-1A0A075B6T8 112 aa4.91□□□□□ -1.62
SMAD1-213ENST00000514778 A0A087WWC5 75 aa4.91□□□□□ -1.62
SMAD1-213ENST00000514778 A0A087WWL8 130 aa4.91□□□□□ -1.62
SMAD1-213ENST00000514778 PPP1R17O96001 155 aa4.91□□□□□ -1.62
SMAD1-213ENST00000514778 RPL36AP83881 106 aaKnown RBP4.91□□□□□ -1.62
SMAD1-213ENST00000514778 RHEBQ15382 184 aa4.91□□□□□ -1.62
SMAD1-213ENST00000514778 ZNF56Q15929 161 aa4.91□□□□□ -1.62
SMAD1-213ENST00000514778 SREK1IP1Q8N9Q2 155 aaPredicted RBP4.91□□□□□ -1.62
SMAD1-213ENST00000514778 RPL36ALQ969Q0 106 aaKnown RBP4.91□□□□□ -1.62
SMAD1-213ENST00000514778 TMEM191AQ9H0A3 160 aa4.91□□□□□ -1.62
SMAD1-213ENST00000514778 MSRB1Q9NZV6 116 aa4.91□□□□□ -1.62
SMAD1-213ENST00000514778 IGHV3-73A0A0B4J1V6 119 aa4.9□□□□□ -1.63
SMAD1-213ENST00000514778 MUC21A0A0G2JKD1 596 aa4.9□□□□□ -1.63
SMAD1-213ENST00000514778 MUC21A0A140T8X8 626 aa4.9□□□□□ -1.63
SMAD1-213ENST00000514778 F5H697 171 aa4.9□□□□□ -1.63
SMAD1-213ENST00000514778 LY6G6CO95867 125 aa4.9□□□□□ -1.63
SMAD1-213ENST00000514778 LINC00694P0DN24 101 aa4.9□□□□□ -1.63
SMAD1-213ENST00000514778 BTF3P20290 206 aaKnown RBP4.9□□□□□ -1.63
SMAD1-213ENST00000514778 EVI2AP22794 236 aa4.9□□□□□ -1.63
SMAD1-213ENST00000514778 ESRGQ1W209 222 aa4.9□□□□□ -1.63
SMAD1-213ENST00000514778 TMEM97Q5BJF2 176 aa4.9□□□□□ -1.63
SMAD1-213ENST00000514778 RASL11AQ6T310 242 aa4.9□□□□□ -1.63
SMAD1-213ENST00000514778 LYPD5Q6UWN5 251 aa4.9□□□□□ -1.63
SMAD1-213ENST00000514778 Q6ZSN1 163 aa4.9□□□□□ -1.63
SMAD1-213ENST00000514778 DAZ4Q86SG3 579 aaKnown RBP4.9□□□□□ -1.63
SMAD1-213ENST00000514778 UBE2DNLQ8IWF7 75 aa4.9□□□□□ -1.63
SMAD1-213ENST00000514778 SLC7A5P1Q8MH63 180 aa4.9□□□□□ -1.63
SMAD1-213ENST00000514778 SVBPQ8N300 66 aa4.9□□□□□ -1.63
SMAD1-213ENST00000514778 GATD1Q8NB37 220 aa4.9□□□□□ -1.63
SMAD1-213ENST00000514778 DAZ3Q9NR90 486 aaKnown RBP4.9□□□□□ -1.63
SMAD1-213ENST00000514778 MRPS16Q9Y3D3 137 aaKnown RBP4.9□□□□□ -1.63
SMAD1-213ENST00000514778 MUC4Q99102 2169 aa4.89□□□□□ -1.63
SMAD1-213ENST00000514778 M0QY20 66 aa4.89□□□□□ -1.63
SMAD1-213ENST00000514778 SNAPINO95295 136 aa4.89□□□□□ -1.63
SMAD1-213ENST00000514778 UBE2D3P61077 147 aa4.89□□□□□ -1.63
SMAD1-213ENST00000514778 SSTP61278 116 aa4.89□□□□□ -1.63
SMAD1-213ENST00000514778 UBE2D2P62837 147 aa4.89□□□□□ -1.63
SMAD1-213ENST00000514778 KCNIP4Q6PIL6 250 aa4.89□□□□□ -1.63
SMAD1-213ENST00000514778 ATP6V0E2Q8NHE4 81 aa4.89□□□□□ -1.63
SMAD1-213ENST00000514778 ZNRF2Q8NHG8 242 aa4.89□□□□□ -1.63
SMAD1-213ENST00000514778 MRAP2Q96G30 205 aa4.89□□□□□ -1.63
SMAD1-213ENST00000514778 BTF3L4Q96K17 158 aa4.89□□□□□ -1.63
SMAD1-213ENST00000514778 GTSF1LQ9H1H1 148 aa4.89□□□□□ -1.63
SMAD1-213ENST00000514778 NIT2Q9NQR4 276 aa4.89□□□□□ -1.63
SMAD1-213ENST00000514778 AP5S1Q9NUS5 200 aa4.89□□□□□ -1.63
SMAD1-213ENST00000514778 LINC00588Q9Y4M8 146 aa4.89□□□□□ -1.63
SMAD1-213ENST00000514778 TENM2Q9NT68 2774 aa4.89□□□□□ -1.63
SMAD1-213ENST00000514778 TRAV8-6A0A0B4J262 113 aa4.88□□□□□ -1.63
SMAD1-213ENST00000514778 TRBV6-5A0A0K0K1A5 114 aa4.88□□□□□ -1.63
SMAD1-213ENST00000514778 A0A1B0GXF2 115 aa4.88□□□□□ -1.63
SMAD1-213ENST00000514778 MGPP08493 103 aa4.88□□□□□ -1.63
SMAD1-213ENST00000514778 S100PP25815 95 aa4.88□□□□□ -1.63
SMAD1-213ENST00000514778 HBBP68871 147 aa4.88□□□□□ -1.63
SMAD1-213ENST00000514778 COX19Q49B96 90 aa4.88□□□□□ -1.63
SMAD1-213ENST00000514778 LELP1Q5T871 98 aa4.88□□□□□ -1.63
SMAD1-213ENST00000514778 SUMO4Q6EEV6 95 aa4.88□□□□□ -1.63
SMAD1-213ENST00000514778 CLRN3Q8NCR9 226 aa4.88□□□□□ -1.63
SMAD1-213ENST00000514778 TNFRSF18Q9Y5U5 241 aa4.88□□□□□ -1.63
SMAD1-213ENST00000514778 DYNC2H1Q8NCM8 4307 aaKnown RBP4.88□□□□□ -1.63
SMAD1-213ENST00000514778 TRAV9-2A0A087WT02 112 aa4.87□□□□□ -1.63
SMAD1-213ENST00000514778 LOC100131303A0A0U1RQF7 123 aa4.87□□□□□ -1.63
SMAD1-213ENST00000514778 C7orf77A4D0Y5 90 aa4.87□□□□□ -1.63
SMAD1-213ENST00000514778 GAGE12JA6NER3 117 aa4.87□□□□□ -1.63
SMAD1-213ENST00000514778 PPBPP02775 128 aa4.87□□□□□ -1.63
SMAD1-213ENST00000514778 RAB4AP20338 218 aa4.87□□□□□ -1.63
SMAD1-213ENST00000514778 PKIAP61925 76 aa4.87□□□□□ -1.63
SMAD1-213ENST00000514778 GAGE1Q13065 139 aa4.87□□□□□ -1.63
SMAD1-213ENST00000514778 GAGE4Q13068 117 aa4.87□□□□□ -1.63
SMAD1-213ENST00000514778 GAGE5Q13069 117 aa4.87□□□□□ -1.63
SMAD1-213ENST00000514778 GAGE13Q4V321 117 aa4.87□□□□□ -1.63
SMAD1-213ENST00000514778 ANKRD39Q53RE8 183 aa4.87□□□□□ -1.63
SMAD1-213ENST00000514778 TTC32Q5I0X7 151 aa4.87□□□□□ -1.63
SMAD1-213ENST00000514778 FAM104BQ5XKR9 115 aa4.87□□□□□ -1.63
SMAD1-213ENST00000514778 NEXN-AS1Q8NBZ9 246 aa4.87□□□□□ -1.63
SMAD1-213ENST00000514778 Q9H8V8 135 aa4.87□□□□□ -1.63
SMAD1-213ENST00000514778 TRBV24-1A0A075B6N3 115 aa4.86□□□□□ -1.63
SMAD1-213ENST00000514778 PHOX2AO14813 284 aa4.86□□□□□ -1.63
SMAD1-213ENST00000514778 SIVA1O15304 175 aa4.86□□□□□ -1.63
SMAD1-213ENST00000514778 NCR2O95944 276 aa4.86□□□□□ -1.63
SMAD1-213ENST00000514778 APOC3P02656 99 aa4.86□□□□□ -1.63
SMAD1-213ENST00000514778 DNAH10OSP0CZ25 163 aa4.86□□□□□ -1.63
SMAD1-213ENST00000514778 RNF185Q96GF1 192 aa4.86□□□□□ -1.63
SMAD1-213ENST00000514778 CHCHD7Q9BUK0 85 aa4.86□□□□□ -1.63
SMAD1-213ENST00000514778 TRBV6-8A0A0A6YYG3 113 aa4.85□□□□□ -1.63
SMAD1-213ENST00000514778 IGHV3-38A0A0C4DH36 116 aa4.85□□□□□ -1.63
SMAD1-213ENST00000514778 NBDYA0A0U1RRE5 68 aa4.85□□□□□ -1.63
SMAD1-213ENST00000514778 TCAPO15273 167 aa4.85□□□□□ -1.63
SMAD1-213ENST00000514778 ATP6V1G1O75348 118 aa4.85□□□□□ -1.63
SMAD1-213ENST00000514778 CAMPP49913 170 aa4.85□□□□□ -1.63
SMAD1-213ENST00000514778 RPL32P62910 135 aaKnown RBP4.85□□□□□ -1.63
SMAD1-213ENST00000514778 LINC01556Q5JQF7 62 aa4.85□□□□□ -1.63
SMAD1-213ENST00000514778 KRTAP5-3Q6L8H2 238 aa4.85□□□□□ -1.63
SMAD1-213ENST00000514778 MRPL54Q6P161 138 aaKnown RBP4.85□□□□□ -1.63
SMAD1-213ENST00000514778 Q6ZR54 194 aa4.85□□□□□ -1.63
SMAD1-213ENST00000514778 AMN1Q8IY45 258 aa4.85□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 59.9 ms