RNA–Protein interactions for RNA: ENST00000514603.1

GYPA-210, Transcript of glycophorin A (MNS blood group), humanhuman

TSL 5

Gene GYPA, Length 613 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPA-210ENST00000514603 MAGI2Q86UL8 1455 aa0.58□□□□□ -2.32
GYPA-210ENST00000514603 TEX14Q8IWB6 1497 aa0.58□□□□□ -2.32
GYPA-210ENST00000514603 FANCD2Q9BXW9 1451 aa0.58□□□□□ -2.32
GYPA-210ENST00000514603 NRXN1Q9ULB1 1477 aa0.58□□□□□ -2.32
GYPA-210ENST00000514603 ABCC3O15438 1527 aa0.58□□□□□ -2.32
GYPA-210ENST00000514603 MAGI3Q5TCQ9 1506 aa0.58□□□□□ -2.32
GYPA-210ENST00000514603 CLASP1Q7Z460 1538 aa0.58□□□□□ -2.32
GYPA-210ENST00000514603 LRRC7Q96NW7 1537 aa0.58□□□□□ -2.32
GYPA-210ENST00000514603 UGGT2Q9NYU1 1516 aa0.58□□□□□ -2.32
GYPA-210ENST00000514603 CHD1O14646 1710 aa0.58□□□□□ -2.32
GYPA-210ENST00000514603 NALCNQ8IZF0 1738 aa0.58□□□□□ -2.32
GYPA-210ENST00000514603 CASZ1Q86V15 1759 aa0.57□□□□□ -2.32
GYPA-210ENST00000514603 SHROOM2Q13796 1616 aa0.57□□□□□ -2.32
GYPA-210ENST00000514603 IQGAP3Q86VI3 1631 aa0.57□□□□□ -2.32
GYPA-210ENST00000514603 HFM1A2PYH4 1435 aa0.57□□□□□ -2.32
GYPA-210ENST00000514603 DISP2A7MBM2 1401 aa0.57□□□□□ -2.32
GYPA-210ENST00000514603 TROQ12816 1431 aaPredicted RBP0.57□□□□□ -2.32
GYPA-210ENST00000514603 CASKIN1Q8WXD9 1431 aa0.57□□□□□ -2.32
GYPA-210ENST00000514603 ANKRD50Q9ULJ7 1429 aa0.57□□□□□ -2.32
GYPA-210ENST00000514603 POLA1P09884 1462 aaPredicted RBP0.57□□□□□ -2.32
GYPA-210ENST00000514603 IQSEC2Q5JU85 1478 aa0.57□□□□□ -2.32
GYPA-210ENST00000514603 CCDC141Q6ZP82 1450 aa0.57□□□□□ -2.32
GYPA-210ENST00000514603 SMIM31A0A1B0GVY4 71 aa0.57□□□□□ -2.32
GYPA-210ENST00000514603 RBAKDNA6NC62 111 aa0.57□□□□□ -2.32
GYPA-210ENST00000514603 F2Z2F3 143 aa0.57□□□□□ -2.32
GYPA-210ENST00000514603 F6UZH7 168 aa0.57□□□□□ -2.32
GYPA-210ENST00000514603 CORTO00230 105 aa0.57□□□□□ -2.32
GYPA-210ENST00000514603 S100A8P05109 93 aa0.57□□□□□ -2.32
GYPA-210ENST00000514603 NMBP08949 121 aa0.57□□□□□ -2.32
GYPA-210ENST00000514603 LINC00694P0DN24 101 aa0.57□□□□□ -2.32
GYPA-210ENST00000514603 GNGT1P63211 74 aa0.57□□□□□ -2.32
GYPA-210ENST00000514603 CYP2G1PQ6ZSU1 146 aa0.57□□□□□ -2.32
GYPA-210ENST00000514603 LINC00470Q9BZP3 86 aa0.57□□□□□ -2.32
GYPA-210ENST00000514603 SCN3BQ9NY72 215 aa0.57□□□□□ -2.32
GYPA-210ENST00000514603 COPZ2Q9P299 210 aa0.57□□□□□ -2.32
GYPA-210ENST00000514603 LINC00312Q9Y6C7 94 aa0.57□□□□□ -2.32
GYPA-210ENST00000514603 ABCA3Q99758 1704 aa0.57□□□□□ -2.32
GYPA-210ENST00000514603 ANKRD26Q9UPS8 1709 aa0.57□□□□□ -2.32
GYPA-210ENST00000514603 CDK13Q14004 1512 aaKnown RBP0.57□□□□□ -2.32
GYPA-210ENST00000514603 GLI2P10070 1586 aa0.57□□□□□ -2.32
GYPA-210ENST00000514603 PHIPQ8WWQ0 1821 aa0.57□□□□□ -2.32
GYPA-210ENST00000514603 TARBP1Q13395 1621 aaKnown RBP0.56□□□□□ -2.32
GYPA-210ENST00000514603 PREX2Q70Z35 1606 aa0.56□□□□□ -2.32
GYPA-210ENST00000514603 MROH1Q8NDA8 1641 aa0.56□□□□□ -2.32
GYPA-210ENST00000514603 CDK5RAP2Q96SN8 1893 aa0.56□□□□□ -2.32
GYPA-210ENST00000514603 PRG4Q92954 1404 aaPredicted RBP0.56□□□□□ -2.32
GYPA-210ENST00000514603 ZC3H13Q5T200 1668 aaKnown RBP0.56□□□□□ -2.32
GYPA-210ENST00000514603 AKAP11Q9UKA4 1901 aa0.56□□□□□ -2.32
GYPA-210ENST00000514603 ERVK-7P63135 1459 aa0.56□□□□□ -2.32
GYPA-210ENST00000514603 SHANK2Q9UPX8 1470 aa0.56□□□□□ -2.32
GYPA-210ENST00000514603 FAM236AA0A1B0GUQ0 79 aa0.56□□□□□ -2.32
GYPA-210ENST00000514603 FAM236BA0A1B0GV22 79 aa0.56□□□□□ -2.32
GYPA-210ENST00000514603 M0R129 80 aa0.56□□□□□ -2.32
GYPA-210ENST00000514603 M0R143 59 aa0.56□□□□□ -2.32
GYPA-210ENST00000514603 MT-ATP8P03928 68 aa0.56□□□□□ -2.32
GYPA-210ENST00000514603 TSPAN19P0C672 248 aa0.56□□□□□ -2.32
GYPA-210ENST00000514603 COX4I1P13073 169 aa0.56□□□□□ -2.32
GYPA-210ENST00000514603 ALKAL2Q6UX46 152 aa0.56□□□□□ -2.32
GYPA-210ENST00000514603 C10orf82Q8WW14 230 aa0.56□□□□□ -2.32
GYPA-210ENST00000514603 LSM10Q969L4 123 aaKnown RBP0.56□□□□□ -2.32
GYPA-210ENST00000514603 PPP3R2Q96LZ3 170 aa0.56□□□□□ -2.32
GYPA-210ENST00000514603 NPVFQ9HCQ7 196 aa0.56□□□□□ -2.32
GYPA-210ENST00000514603 LSM2Q9Y333 95 aaKnown RBP0.56□□□□□ -2.32
GYPA-210ENST00000514603 UNC13BO14795 1591 aa0.56□□□□□ -2.32
GYPA-210ENST00000514603 DIP2AQ14689 1571 aa0.56□□□□□ -2.32
GYPA-210ENST00000514603 INO80Q9ULG1 1556 aaPredicted RBP0.56□□□□□ -2.32
GYPA-210ENST00000514603 DIP2CQ9Y2E4 1556 aa0.56□□□□□ -2.32
GYPA-210ENST00000514603 TANC1Q9C0D5 1861 aa0.56□□□□□ -2.32
GYPA-210ENST00000514603 BIVM-ERCC5R4GMW8 1640 aa0.56□□□□□ -2.32
GYPA-210ENST00000514603 CUL7Q14999 1698 aa0.56□□□□□ -2.32
GYPA-210ENST00000514603 ROBO1Q9Y6N7 1651 aa0.56□□□□□ -2.32
GYPA-210ENST00000514603 DAPK1P53355 1430 aa0.55□□□□□ -2.32
GYPA-210ENST00000514603 MYOM2P54296 1465 aa0.55□□□□□ -2.32
GYPA-210ENST00000514603 HMGXB3Q12766 1538 aa0.55□□□□□ -2.32
GYPA-210ENST00000514603 FAM135AQ9P2D6 1515 aa0.55□□□□□ -2.32
GYPA-210ENST00000514603 CDC42BPGQ6DT37 1551 aa0.55□□□□□ -2.32
GYPA-210ENST00000514603 TRAV30A0A087WSZ9 112 aa0.55□□□□□ -2.32
GYPA-210ENST00000514603 M0R2Z0 102 aa0.55□□□□□ -2.32
GYPA-210ENST00000514603 IGLC6P0CF74 106 aa0.55□□□□□ -2.32
GYPA-210ENST00000514603 IGLC1P0CG04 106 aa0.55□□□□□ -2.32
GYPA-210ENST00000514603 FGF7P21781 194 aa0.55□□□□□ -2.32
GYPA-210ENST00000514603 RPS25P62851 125 aaKnown RBP0.55□□□□□ -2.32
GYPA-210ENST00000514603 OR2T2Q6IF00 324 aa0.55□□□□□ -2.32
GYPA-210ENST00000514603 ZNF720Q7Z2F6 126 aa0.55□□□□□ -2.32
GYPA-210ENST00000514603 TSTD1Q8NFU3 115 aa0.55□□□□□ -2.32
GYPA-210ENST00000514603 TSLPQ969D9 159 aa0.55□□□□□ -2.32
GYPA-210ENST00000514603 ARL11Q969Q4 196 aa0.55□□□□□ -2.32
GYPA-210ENST00000514603 TCEAL7Q9BRU2 100 aa0.55□□□□□ -2.32
GYPA-210ENST00000514603 SCP2D1Q9UJQ7 156 aa0.55□□□□□ -2.32
GYPA-210ENST00000514603 GNG8Q9UK08 70 aa0.55□□□□□ -2.32
GYPA-210ENST00000514603 MYH13Q9UKX3 1938 aa0.55□□□□□ -2.32
GYPA-210ENST00000514603 ABCA9Q8IUA7 1624 aa0.55□□□□□ -2.32
GYPA-210ENST00000514603 CC2D2AQ9P2K1 1620 aa0.55□□□□□ -2.32
GYPA-210ENST00000514603 PPRC1Q5VV67 1664 aaKnown RBP0.55□□□□□ -2.32
GYPA-210ENST00000514603 KTN1Q86UP2 1357 aaKnown RBP0.55□□□□□ -2.32
GYPA-210ENST00000514603 NSD3Q9BZ95 1437 aa0.55□□□□□ -2.32
GYPA-210ENST00000514603 PARP14Q460N5 1801 aa0.54□□□□□ -2.32
GYPA-210ENST00000514603 KIF13AQ9H1H9 1805 aa0.54□□□□□ -2.32
GYPA-210ENST00000514603 A2ML1A8K2U0 1454 aa0.54□□□□□ -2.32
GYPA-210ENST00000514603 PTPRMP28827 1452 aa0.54□□□□□ -2.32
Retrieved 100 of 20,778 RNA–protein pairs in 57.1 ms