RNA–Protein interactions for RNA: ENST00000513761.5

CLCN3-209, Transcript of chloride voltage-gated channel 3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CLCN3, Length 6,692 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-209ENST00000513761 FAM231CP0DMU5 169 aa5.88□□□□□ -1.47
CLCN3-209ENST00000513761 SS18Q15532 418 aa5.88□□□□□ -1.47
CLCN3-209ENST00000513761 CLPSL2Q6UWE3 100 aa5.88□□□□□ -1.47
CLCN3-209ENST00000513761 Q6ZQT7 251 aa5.88□□□□□ -1.47
CLCN3-209ENST00000513761 NRACQ8N912 160 aa5.88□□□□□ -1.47
CLCN3-209ENST00000513761 PRRC2CQ9Y520 2896 aaKnown RBP5.88□□□□□ -1.47
CLCN3-209ENST00000513761 IGHV4-61A0A0C4DH41 118 aa5.88□□□□□ -1.47
CLCN3-209ENST00000513761 C20orf203Q8NBC4 194 aa5.88□□□□□ -1.47
CLCN3-209ENST00000513761 HHLA3Q9XRX5 114 aa5.88□□□□□ -1.47
CLCN3-209ENST00000513761 IGKV3D-7A0A0C4DH55 119 aa5.88□□□□□ -1.47
CLCN3-209ENST00000513761 A0A096LNJ9 63 aa5.88□□□□□ -1.47
CLCN3-209ENST00000513761 NDUFV3P56181 108 aaKnown RBP5.88□□□□□ -1.47
CLCN3-209ENST00000513761 SLC25A29Q8N8R3 303 aa5.88□□□□□ -1.47
CLCN3-209ENST00000513761 EXPH5Q8NEV8 1989 aa5.88□□□□□ -1.47
CLCN3-209ENST00000513761 MED14OSP0DP75 135 aa5.88□□□□□ -1.47
CLCN3-209ENST00000513761 DSCR9P59020 149 aa5.88□□□□□ -1.47
CLCN3-209ENST00000513761 HAMPP81172 84 aa5.88□□□□□ -1.47
CLCN3-209ENST00000513761 TMEM126AQ9H061 195 aa5.88□□□□□ -1.47
CLCN3-209ENST00000513761 OTOGLQ3ZCN5 2332 aa5.88□□□□□ -1.47
CLCN3-209ENST00000513761 DEFB112Q30KQ8 113 aa5.87□□□□□ -1.47
CLCN3-209ENST00000513761 A0A096LPF7 62 aa5.87□□□□□ -1.47
CLCN3-209ENST00000513761 A0A0J9YXY3 114 aa5.87□□□□□ -1.47
CLCN3-209ENST00000513761 ODF3BA8MYP8 253 aa5.87□□□□□ -1.47
CLCN3-209ENST00000513761 SIRPDQ9H106 197 aa5.87□□□□□ -1.47
CLCN3-209ENST00000513761 ZFAND3Q9H8U3 227 aa5.87□□□□□ -1.47
CLCN3-209ENST00000513761 MUC6Q6W4X9 2439 aa5.87□□□□□ -1.47
CLCN3-209ENST00000513761 LY6LH3BQJ8 138 aa5.87□□□□□ -1.47
CLCN3-209ENST00000513761 NFE4Q86UQ8 179 aa5.87□□□□□ -1.47
CLCN3-209ENST00000513761 TET2Q6N021 2002 aaPredicted RBP5.87□□□□□ -1.47
CLCN3-209ENST00000513761 COL5A1P20908 1838 aaPredicted RBP5.87□□□□□ -1.47
CLCN3-209ENST00000513761 XGP55808 180 aa5.87□□□□□ -1.47
CLCN3-209ENST00000513761 CFAP126Q5VTH2 177 aa5.87□□□□□ -1.47
CLCN3-209ENST00000513761 SPATA25Q9BR10 227 aa5.87□□□□□ -1.47
CLCN3-209ENST00000513761 IGHV1-58A0A0C4DH39 117 aa5.86□□□□□ -1.47
CLCN3-209ENST00000513761 SLURP1P55000 103 aa5.86□□□□□ -1.47
CLCN3-209ENST00000513761 C5orf38Q86SI9 138 aa5.86□□□□□ -1.47
CLCN3-209ENST00000513761 NOP10Q9NPE3 64 aaKnown RBP5.86□□□□□ -1.47
CLCN3-209ENST00000513761 ACYP1P07311 99 aa5.86□□□□□ -1.47
CLCN3-209ENST00000513761 Q8NA96 180 aa5.86□□□□□ -1.47
CLCN3-209ENST00000513761 UBL5Q9BZL1 73 aa5.86□□□□□ -1.47
CLCN3-209ENST00000513761 TRBV7-3A0A075B6L6 115 aa5.86□□□□□ -1.47
CLCN3-209ENST00000513761 H3BT86 120 aa5.86□□□□□ -1.47
CLCN3-209ENST00000513761 PRR9Q5T870 116 aa5.86□□□□□ -1.47
CLCN3-209ENST00000513761 Q6ZS46 218 aa5.86□□□□□ -1.47
CLCN3-209ENST00000513761 ZFAND2AQ8N6M9 145 aa5.86□□□□□ -1.47
CLCN3-209ENST00000513761 CRLF1O75462 422 aa5.85□□□□□ -1.47
CLCN3-209ENST00000513761 FSTL3O95633 263 aa5.85□□□□□ -1.47
CLCN3-209ENST00000513761 GHRHP01286 108 aa5.85□□□□□ -1.47
CLCN3-209ENST00000513761 MRPL23Q16540 153 aaKnown RBP5.85□□□□□ -1.47
CLCN3-209ENST00000513761 XCL1P47992 114 aa5.85□□□□□ -1.47
CLCN3-209ENST00000513761 ADORA2A-AS1P86434 159 aa5.85□□□□□ -1.47
CLCN3-209ENST00000513761 SND1-IT1Q9HBX3 110 aa5.85□□□□□ -1.47
CLCN3-209ENST00000513761 CUL9Q8IWT3 2517 aa5.85□□□□□ -1.47
CLCN3-209ENST00000513761 TLN1Q9Y490 2541 aaKnown RBP5.85□□□□□ -1.47
CLCN3-209ENST00000513761 A0A0B4J2C4 111 aa5.85□□□□□ -1.47
CLCN3-209ENST00000513761 Q9HAA7 133 aa5.85□□□□□ -1.47
CLCN3-209ENST00000513761 TRIAP1O43715 76 aa5.85□□□□□ -1.47
CLCN3-209ENST00000513761 IGHV3-33P01772 117 aa5.84□□□□□ -1.47
CLCN3-209ENST00000513761 ZNF22P17026 224 aaPredicted RBP5.84□□□□□ -1.47
CLCN3-209ENST00000513761 VSIG2Q96IQ7 327 aa5.84□□□□□ -1.47
CLCN3-209ENST00000513761 A0A1B0GX51 115 aa5.84□□□□□ -1.47
CLCN3-209ENST00000513761 ELANEP08246 267 aa5.84□□□□□ -1.47
CLCN3-209ENST00000513761 GATA3P23771 443 aa5.84□□□□□ -1.47
CLCN3-209ENST00000513761 BRCA2P51587 3418 aa5.84□□□□□ -1.47
CLCN3-209ENST00000513761 IGHV4OR15-8A0A075B7B6 117 aa5.84□□□□□ -1.47
CLCN3-209ENST00000513761 A0A087WW49 117 aa5.84□□□□□ -1.47
CLCN3-209ENST00000513761 IGHV3-30P01768 117 aa5.84□□□□□ -1.47
CLCN3-209ENST00000513761 IGHV3-30-5P0DP03 117 aa5.84□□□□□ -1.47
CLCN3-209ENST00000513761 HERV-K104P63124 156 aa5.84□□□□□ -1.47
CLCN3-209ENST00000513761 IGHV4-30-2A0A087WSY4 118 aa5.84□□□□□ -1.47
CLCN3-209ENST00000513761 MIAQ16674 131 aa5.84□□□□□ -1.47
CLCN3-209ENST00000513761 CACNA1AO00555 2505 aa5.84□□□□□ -1.47
CLCN3-209ENST00000513761 A0A0J9YX75 114 aa5.84□□□□□ -1.47
CLCN3-209ENST00000513761 MRPS12O15235 138 aaKnown RBP5.84□□□□□ -1.47
CLCN3-209ENST00000513761 TMEM223A0PJW6 202 aa5.83□□□□□ -1.48
CLCN3-209ENST00000513761 CMC4P56277 68 aaPredicted RBP5.83□□□□□ -1.48
CLCN3-209ENST00000513761 SPANXDQ9BXN6 97 aa5.83□□□□□ -1.48
CLCN3-209ENST00000513761 A8MZ25 164 aa5.83□□□□□ -1.48
CLCN3-209ENST00000513761 IGLV4-3A0A075B6K6 122 aa5.83□□□□□ -1.48
CLCN3-209ENST00000513761 IGHG2P01859 326 aa5.83□□□□□ -1.48
CLCN3-209ENST00000513761 IGF2-ASQ6U949 168 aa5.83□□□□□ -1.48
CLCN3-209ENST00000513761 TRAV4A0A0B4J268 109 aa5.83□□□□□ -1.48
CLCN3-209ENST00000513761 ORMDL1Q9P0S3 153 aa5.83□□□□□ -1.48
CLCN3-209ENST00000513761 CHD7Q9P2D1 2997 aa5.82□□□□□ -1.48
CLCN3-209ENST00000513761 ATRXP46100 2492 aa5.82□□□□□ -1.48
CLCN3-209ENST00000513761 CNFNQ9BYD5 112 aa5.82□□□□□ -1.48
CLCN3-209ENST00000513761 HTTP42858 3142 aa5.82□□□□□ -1.48
CLCN3-209ENST00000513761 LECT2O14960 151 aa5.82□□□□□ -1.48
CLCN3-209ENST00000513761 RNASE3P12724 160 aaKnown RBP5.82□□□□□ -1.48
CLCN3-209ENST00000513761 K7EMT4 169 aa5.82□□□□□ -1.48
CLCN3-209ENST00000513761 PRB1P04280 392 aa5.82□□□□□ -1.48
CLCN3-209ENST00000513761 CDKN2A-AS1Q9UH64 79 aa5.82□□□□□ -1.48
CLCN3-209ENST00000513761 MKI67P46013 3256 aaKnown RBP5.82□□□□□ -1.48
CLCN3-209ENST00000513761 RBMY1FQ15415 496 aaKnown RBP5.82□□□□□ -1.48
CLCN3-209ENST00000513761 PROK1P58294 105 aa5.81□□□□□ -1.48
CLCN3-209ENST00000513761 GPHB5Q86YW7 130 aa5.81□□□□□ -1.48
CLCN3-209ENST00000513761 MIR7-3HGQ8N6C7 128 aa5.81□□□□□ -1.48
CLCN3-209ENST00000513761 AGRNO00468 2067 aa5.81□□□□□ -1.48
CLCN3-209ENST00000513761 VPREB3Q9UKI3 123 aa5.81□□□□□ -1.48
CLCN3-209ENST00000513761 CCDC179H3BU77 68 aa5.81□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 124.7 ms