RNA–Protein interactions for RNA: ENST00000513341.5

PDLIM5-218, Transcript of PDZ and LIM domain 5, humanhuman

TSL 3

Gene PDLIM5, Length 794 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-218ENST00000513341 LINC00474Q9P2X8 69 aa2.21□□□□□ -2.06
PDLIM5-218ENST00000513341 TIMM9Q9Y5J7 89 aa2.21□□□□□ -2.06
PDLIM5-218ENST00000513341 IGLV1-50A0A075B6I6 118 aa2.2□□□□□ -2.06
PDLIM5-218ENST00000513341 TRAV8-4A0A0B4J246 113 aa2.2□□□□□ -2.06
PDLIM5-218ENST00000513341 SMCO3A2RU48 225 aa2.2□□□□□ -2.06
PDLIM5-218ENST00000513341 PCP4L1A6NKN8 68 aa2.2□□□□□ -2.06
PDLIM5-218ENST00000513341 DISC1C4P0D8 188 aa2.2□□□□□ -2.06
PDLIM5-218ENST00000513341 H3BTX0 84 aa2.2□□□□□ -2.06
PDLIM5-218ENST00000513341 GNRH2O43555 120 aa2.2□□□□□ -2.06
PDLIM5-218ENST00000513341 COX7A2P2O60397 106 aa2.2□□□□□ -2.06
PDLIM5-218ENST00000513341 NDUFS6O75380 124 aaKnown RBP2.2□□□□□ -2.06
PDLIM5-218ENST00000513341 P01737 135 aa2.2□□□□□ -2.06
PDLIM5-218ENST00000513341 STAG3L2P0CL84 134 aa2.2□□□□□ -2.06
PDLIM5-218ENST00000513341 IAPPP10997 89 aa2.2□□□□□ -2.06
PDLIM5-218ENST00000513341 GABARAPL2P60520 117 aa2.2□□□□□ -2.06
PDLIM5-218ENST00000513341 CACNG7P62955 275 aa2.2□□□□□ -2.06
PDLIM5-218ENST00000513341 SPANXN5Q5MJ07 72 aa2.2□□□□□ -2.06
PDLIM5-218ENST00000513341 SAPCD1Q5SSQ6 148 aa2.2□□□□□ -2.06
PDLIM5-218ENST00000513341 SNX29P2Q8IUI4 249 aa2.2□□□□□ -2.06
PDLIM5-218ENST00000513341 LINC00518Q8N0U6 118 aa2.2□□□□□ -2.06
PDLIM5-218ENST00000513341 DYNC2LI1Q8TCX1 351 aa2.2□□□□□ -2.06
PDLIM5-218ENST00000513341 SMIM8Q96KF7 97 aa2.2□□□□□ -2.06
PDLIM5-218ENST00000513341 PRRT1Q99946 306 aa2.2□□□□□ -2.06
PDLIM5-218ENST00000513341 PKIGQ9Y2B9 76 aa2.2□□□□□ -2.06
PDLIM5-218ENST00000513341 IGLV10-54A0A075B6I4 117 aa2.19□□□□□ -2.06
PDLIM5-218ENST00000513341 TRAV1-1A0A0B4J248 108 aa2.19□□□□□ -2.06
PDLIM5-218ENST00000513341 TRAV21A0A0B4J279 112 aa2.19□□□□□ -2.06
PDLIM5-218ENST00000513341 RPL37AP8A6NKH3 93 aa2.19□□□□□ -2.06
PDLIM5-218ENST00000513341 A8MWV9 139 aa2.19□□□□□ -2.06
PDLIM5-218ENST00000513341 TMEM262E9PQX1 116 aa2.19□□□□□ -2.06
PDLIM5-218ENST00000513341 AGPAT2O15120 278 aa2.19□□□□□ -2.06
PDLIM5-218ENST00000513341 HLA-DQA1P01909 254 aa2.19□□□□□ -2.06
PDLIM5-218ENST00000513341 CHTF8P0CG12 524 aa2.19□□□□□ -2.06
PDLIM5-218ENST00000513341 RPS10P46783 165 aaKnown RBP2.19□□□□□ -2.06
PDLIM5-218ENST00000513341 CSN1S1P47710 185 aa2.19□□□□□ -2.06
PDLIM5-218ENST00000513341 AQP4P55087 323 aa2.19□□□□□ -2.06
PDLIM5-218ENST00000513341 MRPS10P82664 201 aaKnown RBP2.19□□□□□ -2.06
PDLIM5-218ENST00000513341 COX6A2Q02221 97 aa2.19□□□□□ -2.06
PDLIM5-218ENST00000513341 CNPY1Q3B7I2 92 aa2.19□□□□□ -2.06
PDLIM5-218ENST00000513341 KRTAP26-1Q6PEX3 210 aa2.19□□□□□ -2.06
PDLIM5-218ENST00000513341 TMEM14EPQ6UXP3 125 aa2.19□□□□□ -2.06
PDLIM5-218ENST00000513341 IZUMO2Q6UXV1 221 aa2.19□□□□□ -2.06
PDLIM5-218ENST00000513341 RAB2BQ8WUD1 216 aa2.19□□□□□ -2.06
PDLIM5-218ENST00000513341 MIXL1Q9H2W2 232 aa2.19□□□□□ -2.06
PDLIM5-218ENST00000513341 Q9H521 79 aa2.19□□□□□ -2.06
PDLIM5-218ENST00000513341 RAB26Q9ULW5 256 aa2.19□□□□□ -2.06
PDLIM5-218ENST00000513341 TRBV6-8A0A0A6YYG3 113 aa2.18□□□□□ -2.06
PDLIM5-218ENST00000513341 IGHV3-73A0A0B4J1V6 119 aa2.18□□□□□ -2.06
PDLIM5-218ENST00000513341 TRBV10-1A0A0K0K1A3 114 aa2.18□□□□□ -2.06
PDLIM5-218ENST00000513341 MBP02144 154 aa2.18□□□□□ -2.06
PDLIM5-218ENST00000513341 ANGP03950 147 aaKnown RBP2.18□□□□□ -2.06
PDLIM5-218ENST00000513341 TYMSP04818 313 aa2.18□□□□□ -2.06
PDLIM5-218ENST00000513341 NBEAP1P0C6P0 100 aa2.18□□□□□ -2.06
PDLIM5-218ENST00000513341 AKAIN1P0CW23 69 aa2.18□□□□□ -2.06
PDLIM5-218ENST00000513341 RPL13AP40429 203 aaKnown RBP2.18□□□□□ -2.06
PDLIM5-218ENST00000513341 RPL29P47914 159 aaKnown RBP2.18□□□□□ -2.06
PDLIM5-218ENST00000513341 TAS2R30P59541 319 aa2.18□□□□□ -2.06
PDLIM5-218ENST00000513341 RAB14P61106 215 aa2.18□□□□□ -2.06
PDLIM5-218ENST00000513341 SLC38A11Q08AI6 406 aa2.18□□□□□ -2.06
PDLIM5-218ENST00000513341 TMEM97Q5BJF2 176 aa2.18□□□□□ -2.06
PDLIM5-218ENST00000513341 TMEM128Q5BJH2 165 aa2.18□□□□□ -2.06
PDLIM5-218ENST00000513341 LINC00242Q5T6M2 205 aa2.18□□□□□ -2.06
PDLIM5-218ENST00000513341 AKAP14Q86UN6 197 aa2.18□□□□□ -2.06
PDLIM5-218ENST00000513341 EXOC3-AS1Q8N2X6 119 aa2.18□□□□□ -2.06
PDLIM5-218ENST00000513341 SREK1IP1Q8N9Q2 155 aaPredicted RBP2.18□□□□□ -2.06
PDLIM5-218ENST00000513341 FER1L6-AS1Q8NA97 138 aa2.18□□□□□ -2.06
PDLIM5-218ENST00000513341 OR2G3Q8NGZ4 309 aa2.18□□□□□ -2.06
PDLIM5-218ENST00000513341 LYPD6BQ8NI32 183 aa2.18□□□□□ -2.06
PDLIM5-218ENST00000513341 ASB13Q8WXK3 278 aa2.18□□□□□ -2.06
PDLIM5-218ENST00000513341 DIRC1Q969H9 104 aa2.18□□□□□ -2.06
PDLIM5-218ENST00000513341 CNBD2Q96M20 576 aa2.18□□□□□ -2.06
PDLIM5-218ENST00000513341 C20orf85Q9H1P6 137 aa2.18□□□□□ -2.06
PDLIM5-218ENST00000513341 PSENENQ9NZ42 101 aa2.18□□□□□ -2.06
PDLIM5-218ENST00000513341 CCDC59Q9P031 241 aaKnown RBP2.18□□□□□ -2.06
PDLIM5-218ENST00000513341 COMMD3Q9UBI1 195 aa2.18□□□□□ -2.06
PDLIM5-218ENST00000513341 SCP2D1Q9UJQ7 156 aa2.18□□□□□ -2.06
PDLIM5-218ENST00000513341 TRBV7-3A0A075B6L6 115 aa2.17□□□□□ -2.06
PDLIM5-218ENST00000513341 IGKV2-40A0A087WW87 121 aaPredicted RBP2.17□□□□□ -2.06
PDLIM5-218ENST00000513341 A0A1W2PPV4 95 aa2.17□□□□□ -2.06
PDLIM5-218ENST00000513341 H3BP45 60 aa2.17□□□□□ -2.06
PDLIM5-218ENST00000513341 ATP6V1G2O95670 118 aa2.17□□□□□ -2.06
PDLIM5-218ENST00000513341 IGKV2D-40P01614 121 aaPredicted RBP2.17□□□□□ -2.06
PDLIM5-218ENST00000513341 BCAP31P51572 246 aa2.17□□□□□ -2.06
PDLIM5-218ENST00000513341 S100A12P80511 92 aa2.17□□□□□ -2.06
PDLIM5-218ENST00000513341 C15orf54Q8N8G6 183 aa2.17□□□□□ -2.06
PDLIM5-218ENST00000513341 INO80EQ8NBZ0 244 aaPredicted RBP2.17□□□□□ -2.06
PDLIM5-218ENST00000513341 OR2T35Q8NGX2 323 aa2.17□□□□□ -2.06
PDLIM5-218ENST00000513341 C9orf85Q96MD7 179 aa2.17□□□□□ -2.06
PDLIM5-218ENST00000513341 MGST2Q99735 147 aa2.17□□□□□ -2.06
PDLIM5-218ENST00000513341 SAMD10Q9BYL1 202 aa2.17□□□□□ -2.06
PDLIM5-218ENST00000513341 GEMIN7Q9H840 131 aaKnown RBP2.17□□□□□ -2.06
PDLIM5-218ENST00000513341 CARHSP1Q9Y2V2 147 aaKnown RBP2.17□□□□□ -2.06
PDLIM5-218ENST00000513341 IGKV2-24A0A0C4DH68 120 aa2.16□□□□□ -2.06
PDLIM5-218ENST00000513341 FAM25AB3EWG3 89 aa2.16□□□□□ -2.06
PDLIM5-218ENST00000513341 FAM25CB3EWG5 89 aa2.16□□□□□ -2.06
PDLIM5-218ENST00000513341 FAM25GB3EWG6 89 aa2.16□□□□□ -2.06
PDLIM5-218ENST00000513341 HPGDSO60760 199 aa2.16□□□□□ -2.06
PDLIM5-218ENST00000513341 METTL15P1P0C7V9 234 aa2.16□□□□□ -2.06
PDLIM5-218ENST00000513341 UBE2D3P61077 147 aa2.16□□□□□ -2.06
PDLIM5-218ENST00000513341 RRAS2P62070 204 aaPredicted RBP2.16□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms