RNA–Protein interactions for RNA: ENST00000513318.1

HMGXB3-204, Transcript of HMG-box containing 3, humanhuman

TSL 3

Gene HMGXB3, Length 749 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-204ENST00000513318 LINC00315P59091 139 aa5.29□□□□□ -1.56
HMGXB3-204ENST00000513318 HBBP68871 147 aa5.29□□□□□ -1.56
HMGXB3-204ENST00000513318 MRPL23Q16540 153 aaKnown RBP5.29□□□□□ -1.56
HMGXB3-204ENST00000513318 MRPL54Q6P161 138 aaKnown RBP5.29□□□□□ -1.56
HMGXB3-204ENST00000513318 BTF3L4Q96K17 158 aa5.29□□□□□ -1.56
HMGXB3-204ENST00000513318 TMEM191AQ9H0A3 160 aa5.29□□□□□ -1.56
HMGXB3-204ENST00000513318 CDIP1Q9H305 208 aa5.29□□□□□ -1.56
HMGXB3-204ENST00000513318 APLNQ9ULZ1 77 aa5.29□□□□□ -1.56
HMGXB3-204ENST00000513318 A0A096LPF7 62 aa5.28□□□□□ -1.56
HMGXB3-204ENST00000513318 A0A1B0GXF2 115 aa5.28□□□□□ -1.56
HMGXB3-204ENST00000513318 SRIP30626 198 aa5.28□□□□□ -1.56
HMGXB3-204ENST00000513318 SH2D6Q7Z4S9 175 aa5.28□□□□□ -1.56
HMGXB3-204ENST00000513318 GATD1Q8NB37 220 aa5.28□□□□□ -1.56
HMGXB3-204ENST00000513318 FRZBQ92765 325 aa5.28□□□□□ -1.56
HMGXB3-204ENST00000513318 LOC100131303A0A0U1RQF7 123 aa5.27□□□□□ -1.57
HMGXB3-204ENST00000513318 P0DMU3 169 aa5.27□□□□□ -1.57
HMGXB3-204ENST00000513318 FAM231AP0DMU4 169 aa5.27□□□□□ -1.57
HMGXB3-204ENST00000513318 FAM231CP0DMU5 169 aa5.27□□□□□ -1.57
HMGXB3-204ENST00000513318 CAMPP49913 170 aa5.27□□□□□ -1.57
HMGXB3-204ENST00000513318 RPL36AP83881 106 aaKnown RBP5.27□□□□□ -1.57
HMGXB3-204ENST00000513318 SUMO4Q6EEV6 95 aa5.27□□□□□ -1.57
HMGXB3-204ENST00000513318 RASL11AQ6T310 242 aa5.27□□□□□ -1.57
HMGXB3-204ENST00000513318 Q6ZSN1 163 aa5.27□□□□□ -1.57
HMGXB3-204ENST00000513318 NEGR1Q7Z3B1 354 aa5.27□□□□□ -1.57
HMGXB3-204ENST00000513318 RPL36ALQ969Q0 106 aaKnown RBP5.27□□□□□ -1.57
HMGXB3-204ENST00000513318 URGCP-MRPS24S4R325 110 aa5.27□□□□□ -1.57
HMGXB3-204ENST00000513318 TRBV7-3A0A075B6L6 115 aa5.26□□□□□ -1.57
HMGXB3-204ENST00000513318 M0QY20 66 aa5.26□□□□□ -1.57
HMGXB3-204ENST00000513318 LINC00694P0DN24 101 aa5.26□□□□□ -1.57
HMGXB3-204ENST00000513318 FAM104BQ5XKR9 115 aa5.26□□□□□ -1.57
HMGXB3-204ENST00000513318 AMN1Q8IY45 258 aa5.26□□□□□ -1.57
HMGXB3-204ENST00000513318 NEXN-AS1Q8NBZ9 246 aa5.26□□□□□ -1.57
HMGXB3-204ENST00000513318 MRAP2Q96G30 205 aa5.26□□□□□ -1.57
HMGXB3-204ENST00000513318 RNF185Q96GF1 192 aa5.26□□□□□ -1.57
HMGXB3-204ENST00000513318 DNAJC30Q96LL9 226 aa5.26□□□□□ -1.57
HMGXB3-204ENST00000513318 GAGE12JA6NER3 117 aa5.25□□□□□ -1.57
HMGXB3-204ENST00000513318 RAB4AP20338 218 aa5.25□□□□□ -1.57
HMGXB3-204ENST00000513318 CCL18P55774 89 aa5.25□□□□□ -1.57
HMGXB3-204ENST00000513318 GAGE1Q13065 139 aa5.25□□□□□ -1.57
HMGXB3-204ENST00000513318 GAGE4Q13068 117 aa5.25□□□□□ -1.57
HMGXB3-204ENST00000513318 GAGE5Q13069 117 aa5.25□□□□□ -1.57
HMGXB3-204ENST00000513318 COX19Q49B96 90 aa5.25□□□□□ -1.57
HMGXB3-204ENST00000513318 GAGE13Q4V321 117 aa5.25□□□□□ -1.57
HMGXB3-204ENST00000513318 LGALS9CQ6DKI2 356 aa5.25□□□□□ -1.57
HMGXB3-204ENST00000513318 ATRAIDQ6UW56 229 aa5.25□□□□□ -1.57
HMGXB3-204ENST00000513318 UBE2DNLQ8IWF7 75 aa5.25□□□□□ -1.57
HMGXB3-204ENST00000513318 SREK1IP1Q8N9Q2 155 aaPredicted RBP5.25□□□□□ -1.57
HMGXB3-204ENST00000513318 ZNRF2Q8NHG8 242 aa5.25□□□□□ -1.57
HMGXB3-204ENST00000513318 LINC00476Q8WZB0 136 aa5.25□□□□□ -1.57
HMGXB3-204ENST00000513318 LYSTQ99698 3801 aa5.25□□□□□ -1.57
HMGXB3-204ENST00000513318 NIT2Q9NQR4 276 aa5.25□□□□□ -1.57
HMGXB3-204ENST00000513318 PLECQ15149 4684 aaKnown RBP5.25□□□□□ -1.57
HMGXB3-204ENST00000513318 TRAV26-2A0A0B4J265 109 aa5.24□□□□□ -1.57
HMGXB3-204ENST00000513318 PPP1R17O96001 155 aa5.24□□□□□ -1.57
HMGXB3-204ENST00000513318 HLA-DQA1P01909 254 aa5.24□□□□□ -1.57
HMGXB3-204ENST00000513318 TIRAPP58753 221 aa5.24□□□□□ -1.57
HMGXB3-204ENST00000513318 UBE2D3P61077 147 aa5.24□□□□□ -1.57
HMGXB3-204ENST00000513318 UBE2D2P62837 147 aa5.24□□□□□ -1.57
HMGXB3-204ENST00000513318 ELOBQ15370 118 aa5.24□□□□□ -1.57
HMGXB3-204ENST00000513318 MRPL51Q4U2R6 128 aaKnown RBP5.24□□□□□ -1.57
HMGXB3-204ENST00000513318 DAZ4Q86SG3 579 aaKnown RBP5.24□□□□□ -1.57
HMGXB3-204ENST00000513318 ATP6V0E2Q8NHE4 81 aa5.24□□□□□ -1.57
HMGXB3-204ENST00000513318 DAZ3Q9NR90 486 aaKnown RBP5.24□□□□□ -1.57
HMGXB3-204ENST00000513318 SMCO4Q9NRQ5 59 aa5.24□□□□□ -1.57
HMGXB3-204ENST00000513318 Q9UF83 564 aa5.24□□□□□ -1.57
HMGXB3-204ENST00000513318 TNFRSF18Q9Y5U5 241 aa5.24□□□□□ -1.57
HMGXB3-204ENST00000513318 ALMS1Q8TCU4 4167 aa5.23□□□□□ -1.57
HMGXB3-204ENST00000513318 TRBV24-1A0A075B6N3 115 aa5.23□□□□□ -1.57
HMGXB3-204ENST00000513318 TRBV6-5A0A0K0K1A5 114 aa5.23□□□□□ -1.57
HMGXB3-204ENST00000513318 PPBPP02775 128 aa5.23□□□□□ -1.57
HMGXB3-204ENST00000513318 MT-ND6P03923 174 aa5.23□□□□□ -1.57
HMGXB3-204ENST00000513318 LINC00310P59036 64 aa5.23□□□□□ -1.57
HMGXB3-204ENST00000513318 ESRGQ1W209 222 aa5.23□□□□□ -1.57
HMGXB3-204ENST00000513318 TMEM97Q5BJF2 176 aa5.23□□□□□ -1.57
HMGXB3-204ENST00000513318 OR10J3Q5JRS4 329 aa5.23□□□□□ -1.57
HMGXB3-204ENST00000513318 TMEM136Q6ZRR5 245 aa5.23□□□□□ -1.57
HMGXB3-204ENST00000513318 RPL39LQ96EH5 51 aaKnown RBP5.23□□□□□ -1.57
HMGXB3-204ENST00000513318 UPK3BQ9BT76 320 aa5.23□□□□□ -1.57
HMGXB3-204ENST00000513318 GTSF1LQ9H1H1 148 aa5.23□□□□□ -1.57
HMGXB3-204ENST00000513318 MRPS16Q9Y3D3 137 aaKnown RBP5.23□□□□□ -1.57
HMGXB3-204ENST00000513318 LINC00588Q9Y4M8 146 aa5.23□□□□□ -1.57
HMGXB3-204ENST00000513318 TGIF2-C20orf24A0A0A6YYL0 155 aa5.22□□□□□ -1.57
HMGXB3-204ENST00000513318 LCE6AA0A183 80 aa5.22□□□□□ -1.57
HMGXB3-204ENST00000513318 SDHAF1A6NFY7 115 aa5.22□□□□□ -1.57
HMGXB3-204ENST00000513318 D6R8Y8 96 aa5.22□□□□□ -1.57
HMGXB3-204ENST00000513318 SMKR1H3BMG3 65 aa5.22□□□□□ -1.57
HMGXB3-204ENST00000513318 PHOX2AO14813 284 aa5.22□□□□□ -1.57
HMGXB3-204ENST00000513318 LY6G6CO95867 125 aa5.22□□□□□ -1.57
HMGXB3-204ENST00000513318 NCR2O95944 276 aa5.22□□□□□ -1.57
HMGXB3-204ENST00000513318 CKS2P33552 79 aa5.22□□□□□ -1.57
HMGXB3-204ENST00000513318 RPS10P46783 165 aaKnown RBP5.22□□□□□ -1.57
HMGXB3-204ENST00000513318 LELP1Q5T871 98 aa5.22□□□□□ -1.57
HMGXB3-204ENST00000513318 LYPD5Q6UWN5 251 aa5.22□□□□□ -1.57
HMGXB3-204ENST00000513318 CBLN2Q8IUK8 224 aa5.22□□□□□ -1.57
HMGXB3-204ENST00000513318 ORMDL3Q8N138 153 aa5.22□□□□□ -1.57
HMGXB3-204ENST00000513318 GNB1LQ9BYB4 327 aa5.22□□□□□ -1.57
HMGXB3-204ENST00000513318 LAMTOR2Q9Y2Q5 125 aa5.22□□□□□ -1.57
HMGXB3-204ENST00000513318 IGHV3-38A0A0C4DH36 116 aa5.21□□□□□ -1.58
HMGXB3-204ENST00000513318 SCO1O75880 301 aa5.21□□□□□ -1.58
HMGXB3-204ENST00000513318 GAS8-AS1O95177 125 aa5.21□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms