RNA–Protein interactions for RNA: ENST00000511767.3

PDLIM5-216, Transcript of PDZ and LIM domain 5, humanhuman

TSL 5

Gene PDLIM5, Length 463 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-216ENST00000511767 CNFNQ9BYD5 112 aa10.79□□□□□ -0.68
PDLIM5-216ENST00000511767 LRCOL1A6NCL2 159 aa10.78□□□□□ -0.68
PDLIM5-216ENST00000511767 EREGO14944 169 aa10.78□□□□□ -0.68
PDLIM5-216ENST00000511767 CTRLP40313 264 aa10.78□□□□□ -0.68
PDLIM5-216ENST00000511767 CEBPGP53567 150 aa10.78□□□□□ -0.68
PDLIM5-216ENST00000511767 ERVFC1-1P60608 527 aa10.78□□□□□ -0.68
PDLIM5-216ENST00000511767 APOBP04114 4563 aaKnown RBP10.78□□□□□ -0.68
PDLIM5-216ENST00000511767 TRBV6-8A0A0A6YYG3 113 aa10.77□□□□□ -0.69
PDLIM5-216ENST00000511767 GATCO43716 136 aaKnown RBP10.77□□□□□ -0.69
PDLIM5-216ENST00000511767 FUSP35637 526 aaKnown RBP eCLIP10.77□□□□□ -0.69
PDLIM5-216ENST00000511767 FOXA3P55318 350 aaPredicted RBP10.77□□□□□ -0.69
PDLIM5-216ENST00000511767 LAGE3Q14657 143 aa10.77□□□□□ -0.69
PDLIM5-216ENST00000511767 Q9HAA7 133 aa10.77□□□□□ -0.69
PDLIM5-216ENST00000511767 ZNF727A8MUV8 499 aa10.76□□□□□ -0.69
PDLIM5-216ENST00000511767 C9JQL5 133 aa10.76□□□□□ -0.69
PDLIM5-216ENST00000511767 TRGC1P0CF51 173 aa10.76□□□□□ -0.69
PDLIM5-216ENST00000511767 SUMO4Q6EEV6 95 aa10.76□□□□□ -0.69
PDLIM5-216ENST00000511767 NTM-AS1Q6ZSK4 140 aa10.76□□□□□ -0.69
PDLIM5-216ENST00000511767 DNAJC30Q96LL9 226 aa10.76□□□□□ -0.69
PDLIM5-216ENST00000511767 SMIM7Q9BQ49 75 aa10.76□□□□□ -0.69
PDLIM5-216ENST00000511767 HSPG2P98160 4391 aa10.76□□□□□ -0.69
PDLIM5-216ENST00000511767 TRAV8-3A0A0A6YYJ7 113 aa10.75□□□□□ -0.69
PDLIM5-216ENST00000511767 A8MWL6 223 aa10.75□□□□□ -0.69
PDLIM5-216ENST00000511767 TWIST1Q15672 202 aa10.75□□□□□ -0.69
PDLIM5-216ENST00000511767 LINC01551Q86U37 167 aa10.75□□□□□ -0.69
PDLIM5-216ENST00000511767 KRTAP17-1Q9BYP8 105 aa10.75□□□□□ -0.69
PDLIM5-216ENST00000511767 CDK2AP2O75956 126 aa10.74□□□□□ -0.69
PDLIM5-216ENST00000511767 MGPP08493 103 aa10.74□□□□□ -0.69
PDLIM5-216ENST00000511767 CHCHD7Q9BUK0 85 aa10.74□□□□□ -0.69
PDLIM5-216ENST00000511767 TM2D2Q9BX73 214 aa10.74□□□□□ -0.69
PDLIM5-216ENST00000511767 DPH3P1Q9H4G8 78 aa10.74□□□□□ -0.69
PDLIM5-216ENST00000511767 TMEM262E9PQX1 116 aa10.73□□□□□ -0.69
PDLIM5-216ENST00000511767 H7C1H1 209 aa10.73□□□□□ -0.69
PDLIM5-216ENST00000511767 PSCAO43653 123 aa10.73□□□□□ -0.69
PDLIM5-216ENST00000511767 SRSF3P84103 164 aaKnown RBP10.73□□□□□ -0.69
PDLIM5-216ENST00000511767 TMEM97Q5BJF2 176 aa10.73□□□□□ -0.69
PDLIM5-216ENST00000511767 RASL11AQ6T310 242 aa10.73□□□□□ -0.69
PDLIM5-216ENST00000511767 MAPKAPK5-AS1Q8N8E1 139 aa10.73□□□□□ -0.69
PDLIM5-216ENST00000511767 NIT2Q9NQR4 276 aa10.73□□□□□ -0.69
PDLIM5-216ENST00000511767 OSTCQ9NRP0 149 aa10.73□□□□□ -0.69
PDLIM5-216ENST00000511767 KLK12Q9UKR0 248 aa10.73□□□□□ -0.69
PDLIM5-216ENST00000511767 URGCP-MRPS24S4R325 110 aa10.73□□□□□ -0.69
PDLIM5-216ENST00000511767 A0A087WX48 190 aa10.72□□□□□ -0.69
PDLIM5-216ENST00000511767 TMEM241Q24JQ0 296 aa10.72□□□□□ -0.69
PDLIM5-216ENST00000511767 CT83Q5H943 113 aa10.72□□□□□ -0.69
PDLIM5-216ENST00000511767 CDPF1Q6NVV7 123 aa10.72□□□□□ -0.69
PDLIM5-216ENST00000511767 SREK1IP1Q8N9Q2 155 aaPredicted RBP10.72□□□□□ -0.69
PDLIM5-216ENST00000511767 PGLYRP4Q96LB8 373 aa10.72□□□□□ -0.69
PDLIM5-216ENST00000511767 PEA15Q15121 130 aa10.71□□□□□ -0.69
PDLIM5-216ENST00000511767 ELOBQ15370 118 aa10.71□□□□□ -0.69
PDLIM5-216ENST00000511767 FAM74A3Q4VXF1 159 aa10.71□□□□□ -0.69
PDLIM5-216ENST00000511767 SMDT1Q9H4I9 107 aa10.71□□□□□ -0.69
PDLIM5-216ENST00000511767 ATRAIDQ6UW56 229 aa10.7□□□□□ -0.7
PDLIM5-216ENST00000511767 GATD1Q8NB37 220 aa10.7□□□□□ -0.7
PDLIM5-216ENST00000511767 TSKUQ8WUA8 353 aa10.7□□□□□ -0.7
PDLIM5-216ENST00000511767 FAM231BA6NCW3 169 aa10.69□□□□□ -0.7
PDLIM5-216ENST00000511767 KRTAP10-1P60331 282 aa10.69□□□□□ -0.7
PDLIM5-216ENST00000511767 RPL23P62829 140 aaKnown RBP10.69□□□□□ -0.7
PDLIM5-216ENST00000511767 IQCJQ1A5X6 159 aa10.69□□□□□ -0.7
PDLIM5-216ENST00000511767 KCNIP4Q6PIL6 250 aa10.69□□□□□ -0.7
PDLIM5-216ENST00000511767 ENHOQ6UWT2 76 aa10.69□□□□□ -0.7
PDLIM5-216ENST00000511767 FRZBQ92765 325 aa10.69□□□□□ -0.7
PDLIM5-216ENST00000511767 UBE2WQ96B02 151 aa10.69□□□□□ -0.7
PDLIM5-216ENST00000511767 CHCHD5Q9BSY4 110 aa10.69□□□□□ -0.7
PDLIM5-216ENST00000511767 GFRA4Q9GZZ7 299 aa10.69□□□□□ -0.7
PDLIM5-216ENST00000511767 COX11Q9Y6N1 276 aa10.69□□□□□ -0.7
PDLIM5-216ENST00000511767 WFDC2Q14508 124 aa10.68□□□□□ -0.7
PDLIM5-216ENST00000511767 MPV17L2Q567V2 206 aa10.68□□□□□ -0.7
PDLIM5-216ENST00000511767 Q8N814 137 aa10.68□□□□□ -0.7
PDLIM5-216ENST00000511767 ISOC2Q96AB3 205 aa10.68□□□□□ -0.7
PDLIM5-216ENST00000511767 KRTAP4-5Q9BYR2 181 aa10.68□□□□□ -0.7
PDLIM5-216ENST00000511767 V9GYV3 84 aa10.68□□□□□ -0.7
PDLIM5-216ENST00000511767 DNAH8Q96JB1 4490 aa10.67□□□□□ -0.7
PDLIM5-216ENST00000511767 Q0VG73 95 aa10.67□□□□□ -0.7
PDLIM5-216ENST00000511767 GAGE6Q13070 117 aa10.67□□□□□ -0.7
PDLIM5-216ENST00000511767 Q8N976 141 aa10.67□□□□□ -0.7
PDLIM5-216ENST00000511767 BAALCQ8WXS3 180 aa10.67□□□□□ -0.7
PDLIM5-216ENST00000511767 TRBV25-1A0A075B6N4 114 aa10.66□□□□□ -0.7
PDLIM5-216ENST00000511767 TRAV26-2A0A0B4J265 109 aa10.66□□□□□ -0.7
PDLIM5-216ENST00000511767 IGHV1-24A0A0C4DH33 117 aa10.66□□□□□ -0.7
PDLIM5-216ENST00000511767 A0A1B0GUT8 65 aa10.66□□□□□ -0.7
PDLIM5-216ENST00000511767 HIGD1CA8MV81 97 aa10.66□□□□□ -0.7
PDLIM5-216ENST00000511767 GCSHP23434 173 aa10.66□□□□□ -0.7
PDLIM5-216ENST00000511767 PKIAP61925 76 aa10.66□□□□□ -0.7
PDLIM5-216ENST00000511767 RBX1P62877 108 aa10.66□□□□□ -0.7
PDLIM5-216ENST00000511767 SMIM15Q7Z3B0 74 aa10.66□□□□□ -0.7
PDLIM5-216ENST00000511767 C15orf54Q8N8G6 183 aa10.66□□□□□ -0.7
PDLIM5-216ENST00000511767 RMI2Q96E14 147 aa10.66□□□□□ -0.7
PDLIM5-216ENST00000511767 NAT8Q9UHE5 227 aa10.66□□□□□ -0.7
PDLIM5-216ENST00000511767 IGKV2D-24A0A075B6R9 120 aa10.65□□□□□ -0.7
PDLIM5-216ENST00000511767 XGP55808 180 aa10.65□□□□□ -0.7
PDLIM5-216ENST00000511767 NUP35Q8NFH5 326 aa10.65□□□□□ -0.7
PDLIM5-216ENST00000511767 DEFB104AQ8WTQ1 72 aa10.65□□□□□ -0.7
PDLIM5-216ENST00000511767 NTN5Q8WTR8 489 aaPredicted RBP10.65□□□□□ -0.7
PDLIM5-216ENST00000511767 RPL39LQ96EH5 51 aaKnown RBP10.64□□□□□ -0.71
PDLIM5-216ENST00000511767 TMEM191AQ9H0A3 160 aa10.64□□□□□ -0.71
PDLIM5-216ENST00000511767 PRR34Q9NV39 138 aa10.64□□□□□ -0.71
PDLIM5-216ENST00000511767 IGLV5-52A0A0A0MRZ9 124 aa10.63□□□□□ -0.71
PDLIM5-216ENST00000511767 A0A1B0GUV1 79 aa10.63□□□□□ -0.71
PDLIM5-216ENST00000511767 LECT2O14960 151 aa10.63□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms