RNA–Protein interactions for RNA: ENST00000511409.1

TRAPPC11-207, Transcript of trafficking protein particle complex 11, humanhuman

TSL 4

Gene TRAPPC11, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-207ENST00000511409 BAGE3Q86Y29 109 aa0.3□□□□□ -2.36
TRAPPC11-207ENST00000511409 ZNF436-AS1Q8NC38 126 aaPredicted RBP0.3□□□□□ -2.36
TRAPPC11-207ENST00000511409 Q96NJ1 140 aa0.3□□□□□ -2.36
TRAPPC11-207ENST00000511409 SERP1Q9Y6X1 66 aa0.3□□□□□ -2.36
TRAPPC11-207ENST00000511409 R4GMQ9 66 aa0.3□□□□□ -2.36
TRAPPC11-207ENST00000511409 CDK5RAP2Q96SN8 1893 aa0.3□□□□□ -2.36
TRAPPC11-207ENST00000511409 DAPK1P53355 1430 aa0.3□□□□□ -2.36
TRAPPC11-207ENST00000511409 A0A087WTM6 91 aa0.29□□□□□ -2.36
TRAPPC11-207ENST00000511409 TMEM14DPA8MWL7 114 aa0.29□□□□□ -2.36
TRAPPC11-207ENST00000511409 PPP1R17O96001 155 aa0.29□□□□□ -2.36
TRAPPC11-207ENST00000511409 UBE2D1P51668 147 aa0.29□□□□□ -2.36
TRAPPC11-207ENST00000511409 TTC9CQ8N5M4 171 aa0.29□□□□□ -2.36
TRAPPC11-207ENST00000511409 WFDC6Q9BQY6 131 aa0.29□□□□□ -2.36
TRAPPC11-207ENST00000511409 PROK2Q9HC23 129 aa0.29□□□□□ -2.36
TRAPPC11-207ENST00000511409 NPVFQ9HCQ7 196 aa0.29□□□□□ -2.36
TRAPPC11-207ENST00000511409 MUC5ACP98088 5654 aa0.29□□□□□ -2.36
TRAPPC11-207ENST00000511409 ESPL1Q14674 2120 aa0.29□□□□□ -2.36
TRAPPC11-207ENST00000511409 ZNF518AQ6AHZ1 1483 aa0.29□□□□□ -2.36
TRAPPC11-207ENST00000511409 FRAS1Q86XX4 4008 aa0.29□□□□□ -2.36
TRAPPC11-207ENST00000511409 CASZ1Q86V15 1759 aa0.28□□□□□ -2.36
TRAPPC11-207ENST00000511409 TRAV13-2A0A0B4J235 113 aa0.28□□□□□ -2.36
TRAPPC11-207ENST00000511409 SNAPC5O75971 98 aa0.28□□□□□ -2.36
TRAPPC11-207ENST00000511409 NMBP08949 121 aa0.28□□□□□ -2.36
TRAPPC11-207ENST00000511409 BTG2P78543 158 aa0.28□□□□□ -2.36
TRAPPC11-207ENST00000511409 C8orf59Q8N0T1 100 aaPredicted RBP0.28□□□□□ -2.36
TRAPPC11-207ENST00000511409 SPANXDQ9BXN6 97 aa0.28□□□□□ -2.36
TRAPPC11-207ENST00000511409 DLEC1Q9Y238 1755 aa0.27□□□□□ -2.37
TRAPPC11-207ENST00000511409 TRAV1-2A0A0B4J238 106 aa0.27□□□□□ -2.37
TRAPPC11-207ENST00000511409 A0A0D9SFI3 127 aa0.27□□□□□ -2.37
TRAPPC11-207ENST00000511409 PIN1P1O15428 100 aa0.27□□□□□ -2.37
TRAPPC11-207ENST00000511409 SPINK1P00995 79 aa0.27□□□□□ -2.37
TRAPPC11-207ENST00000511409 S100A3P33764 101 aa0.27□□□□□ -2.37
TRAPPC11-207ENST00000511409 SPAG11BQ08648 103 aa0.27□□□□□ -2.37
TRAPPC11-207ENST00000511409 CATR1Q13166 79 aa0.27□□□□□ -2.37
TRAPPC11-207ENST00000511409 Q5VV11 94 aa0.27□□□□□ -2.37
TRAPPC11-207ENST00000511409 Q6AWC8 147 aa0.27□□□□□ -2.37
TRAPPC11-207ENST00000511409 SPAG11AQ6PDA7 123 aa0.27□□□□□ -2.37
TRAPPC11-207ENST00000511409 UBE2DNLQ8IWF7 75 aa0.27□□□□□ -2.37
TRAPPC11-207ENST00000511409 FAM213BQ8TBF2 198 aa0.27□□□□□ -2.37
TRAPPC11-207ENST00000511409 SMIM4Q8WVI0 70 aa0.27□□□□□ -2.37
TRAPPC11-207ENST00000511409 PP6455Q8WZ26 134 aa0.27□□□□□ -2.37
TRAPPC11-207ENST00000511409 LSM10Q969L4 123 aaKnown RBP0.27□□□□□ -2.37
TRAPPC11-207ENST00000511409 SCN3BQ9NY72 215 aa0.27□□□□□ -2.37
TRAPPC11-207ENST00000511409 IFT140Q96RY7 1462 aa0.27□□□□□ -2.37
TRAPPC11-207ENST00000511409 CEP152O94986 1710 aa0.27□□□□□ -2.37
TRAPPC11-207ENST00000511409 CTXND1A0A1B0GTU2 59 aa0.26□□□□□ -2.37
TRAPPC11-207ENST00000511409 CLPSL1A2RUU4 121 aa0.26□□□□□ -2.37
TRAPPC11-207ENST00000511409 M0R135 149 aa0.26□□□□□ -2.37
TRAPPC11-207ENST00000511409 SSSCA1O60232 199 aa0.26□□□□□ -2.37
TRAPPC11-207ENST00000511409 MRPS10P82664 201 aaKnown RBP0.26□□□□□ -2.37
TRAPPC11-207ENST00000511409 MRPL54Q6P161 138 aaKnown RBP0.26□□□□□ -2.37
TRAPPC11-207ENST00000511409 SSBP3-AS1Q7Z2R9 100 aa0.26□□□□□ -2.37
TRAPPC11-207ENST00000511409 Q8N8P6 123 aa0.26□□□□□ -2.37
TRAPPC11-207ENST00000511409 MYOZ3Q8TDC0 251 aa0.26□□□□□ -2.37
TRAPPC11-207ENST00000511409 CYP4F30PQ9H0H9 118 aa0.26□□□□□ -2.37
TRAPPC11-207ENST00000511409 GNG8Q9UK08 70 aa0.26□□□□□ -2.37
TRAPPC11-207ENST00000511409 ROCK2O75116 1388 aaKnown RBP0.26□□□□□ -2.37
TRAPPC11-207ENST00000511409 PTPRMP28827 1452 aa0.26□□□□□ -2.37
TRAPPC11-207ENST00000511409 GRIN2AQ12879 1464 aa0.26□□□□□ -2.37
TRAPPC11-207ENST00000511409 CDK13Q14004 1512 aaKnown RBP0.26□□□□□ -2.37
TRAPPC11-207ENST00000511409 WDR97A6NE52 1622 aa0.26□□□□□ -2.37
TRAPPC11-207ENST00000511409 KMT2DO14686 5537 aa0.26□□□□□ -2.37
TRAPPC11-207ENST00000511409 ABCA4P78363 2273 aa0.25□□□□□ -2.37
TRAPPC11-207ENST00000511409 KIF13AQ9H1H9 1805 aa0.25□□□□□ -2.37
TRAPPC11-207ENST00000511409 LOC100130705A0A1B0GUX0 176 aa0.25□□□□□ -2.37
TRAPPC11-207ENST00000511409 A0A1B0GV90 55 aa0.25□□□□□ -2.37
TRAPPC11-207ENST00000511409 FAM24AA6NFZ4 105 aa0.25□□□□□ -2.37
TRAPPC11-207ENST00000511409 MIF4GDA9UHW6 222 aaKnown RBP0.25□□□□□ -2.37
TRAPPC11-207ENST00000511409 DLEU1O43261 78 aa0.25□□□□□ -2.37
TRAPPC11-207ENST00000511409 SPINK8P0C7L1 97 aa0.25□□□□□ -2.37
TRAPPC11-207ENST00000511409 TPPP2P59282 170 aa0.25□□□□□ -2.37
TRAPPC11-207ENST00000511409 Q5BKY6 102 aa0.25□□□□□ -2.37
TRAPPC11-207ENST00000511409 CFAP126Q5VTH2 177 aa0.25□□□□□ -2.37
TRAPPC11-207ENST00000511409 MYH13Q9UKX3 1938 aa0.25□□□□□ -2.37
TRAPPC11-207ENST00000511409 ABCA1O95477 2261 aa0.24□□□□□ -2.37
TRAPPC11-207ENST00000511409 TRBV7-3A0A075B6L6 115 aa0.24□□□□□ -2.37
TRAPPC11-207ENST00000511409 SPAARA0A1B0GVQ0 90 aa0.24□□□□□ -2.37
TRAPPC11-207ENST00000511409 LOC285095A0A1B0GVY8 99 aa0.24□□□□□ -2.37
TRAPPC11-207ENST00000511409 ZNF815PA8K554 130 aa0.24□□□□□ -2.37
TRAPPC11-207ENST00000511409 F6UZH7 168 aa0.24□□□□□ -2.37
TRAPPC11-207ENST00000511409 TNFP01375 233 aa0.24□□□□□ -2.37
TRAPPC11-207ENST00000511409 S100A1P23297 94 aa0.24□□□□□ -2.37
TRAPPC11-207ENST00000511409 TMEM170BQ5T4T1 132 aa0.24□□□□□ -2.37
TRAPPC11-207ENST00000511409 C9orf153Q5TBE3 101 aa0.24□□□□□ -2.37
TRAPPC11-207ENST00000511409 C5orf38Q86SI9 138 aa0.24□□□□□ -2.37
TRAPPC11-207ENST00000511409 SVBPQ8N300 66 aa0.24□□□□□ -2.37
TRAPPC11-207ENST00000511409 TMEM203Q969S6 136 aa0.24□□□□□ -2.37
TRAPPC11-207ENST00000511409 MGST2Q99735 147 aa0.24□□□□□ -2.37
TRAPPC11-207ENST00000511409 DYNLRB1Q9NP97 96 aa0.24□□□□□ -2.37
TRAPPC11-207ENST00000511409 LENEPQ9Y5L5 61 aa0.24□□□□□ -2.37
TRAPPC11-207ENST00000511409 IER3IP1Q9Y5U9 82 aa0.24□□□□□ -2.37
TRAPPC11-207ENST00000511409 V9GYH0 126 aa0.24□□□□□ -2.37
TRAPPC11-207ENST00000511409 ADGRB1O14514 1584 aa0.23□□□□□ -2.37
TRAPPC11-207ENST00000511409 ZMYM4Q5VZL5 1548 aa0.23□□□□□ -2.37
TRAPPC11-207ENST00000511409 CFTRP13569 1480 aa0.23□□□□□ -2.37
TRAPPC11-207ENST00000511409 KTN1Q86UP2 1357 aaKnown RBP0.23□□□□□ -2.37
TRAPPC11-207ENST00000511409 OOSP1A8MZH6 123 aa0.23□□□□□ -2.37
TRAPPC11-207ENST00000511409 F8VRH5 84 aa0.23□□□□□ -2.37
TRAPPC11-207ENST00000511409 CORTO00230 105 aa0.23□□□□□ -2.37
TRAPPC11-207ENST00000511409 UQCR11O14957 56 aa0.23□□□□□ -2.37
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms