RNA–Protein interactions for RNA: ENST00000510737.1

USP53-206, Transcript of ubiquitin specific peptidase 53, humanhuman

TSL 5

Gene USP53, Length 534 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-206ENST00000510737 ARL6IP6Q8N6S5 226 aa3.35□□□□□ -1.87
USP53-206ENST00000510737 OR51S1Q8NGJ8 323 aa3.35□□□□□ -1.87
USP53-206ENST00000510737 C9orf85Q96MD7 179 aa3.35□□□□□ -1.87
USP53-206ENST00000510737 NPVFQ9HCQ7 196 aa3.35□□□□□ -1.87
USP53-206ENST00000510737 SHPKQ9UHJ6 478 aa3.35□□□□□ -1.87
USP53-206ENST00000510737 TIMM9Q9Y5J7 89 aa3.35□□□□□ -1.87
USP53-206ENST00000510737 TRBV6-8A0A0A6YYG3 113 aa3.34□□□□□ -1.87
USP53-206ENST00000510737 AGPAT2O15120 278 aa3.34□□□□□ -1.87
USP53-206ENST00000510737 SYNGR2O43760 224 aa3.34□□□□□ -1.87
USP53-206ENST00000510737 ATP5HO75947 161 aa3.34□□□□□ -1.87
USP53-206ENST00000510737 MT-ND6P03923 174 aa3.34□□□□□ -1.87
USP53-206ENST00000510737 RPL13AP40429 203 aaKnown RBP3.34□□□□□ -1.87
USP53-206ENST00000510737 CAV2P51636 162 aa3.34□□□□□ -1.87
USP53-206ENST00000510737 UBE2D1P51668 147 aa3.34□□□□□ -1.87
USP53-206ENST00000510737 RRAS2P62070 204 aaPredicted RBP3.34□□□□□ -1.87
USP53-206ENST00000510737 SPCS2Q15005 226 aa3.34□□□□□ -1.87
USP53-206ENST00000510737 SCGB2B2Q4G0G5 96 aa3.34□□□□□ -1.87
USP53-206ENST00000510737 C15orf56Q8N910 161 aa3.34□□□□□ -1.87
USP53-206ENST00000510737 OR2G3Q8NGZ4 309 aa3.34□□□□□ -1.87
USP53-206ENST00000510737 PTH2Q96A98 100 aa3.34□□□□□ -1.87
USP53-206ENST00000510737 LINC00474Q9P2X8 69 aa3.34□□□□□ -1.87
USP53-206ENST00000510737 TRAV34A0A0B4J273 112 aa3.33□□□□□ -1.88
USP53-206ENST00000510737 PYYP10082 97 aa3.33□□□□□ -1.88
USP53-206ENST00000510737 RBX1P62877 108 aa3.33□□□□□ -1.88
USP53-206ENST00000510737 FAM162BQ5T6X4 162 aa3.33□□□□□ -1.88
USP53-206ENST00000510737 ASB13Q8WXK3 278 aa3.33□□□□□ -1.88
USP53-206ENST00000510737 KCNS1Q96KK3 526 aa3.33□□□□□ -1.88
USP53-206ENST00000510737 CIB3Q96Q77 187 aaPredicted RBP3.33□□□□□ -1.88
USP53-206ENST00000510737 SLC39A9Q9NUM3 307 aa3.33□□□□□ -1.88
USP53-206ENST00000510737 TMEM14CQ9P0S9 112 aa3.33□□□□□ -1.88
USP53-206ENST00000510737 C14orf166Q9Y224 244 aaKnown RBP3.33□□□□□ -1.88
USP53-206ENST00000510737 KCNIP3Q9Y2W7 256 aa3.33□□□□□ -1.88
USP53-206ENST00000510737 STRAPQ9Y3F4 350 aaKnown RBP3.33□□□□□ -1.88
USP53-206ENST00000510737 MED6O75586 246 aa3.32□□□□□ -1.88
USP53-206ENST00000510737 RNASE3P12724 160 aaKnown RBP3.32□□□□□ -1.88
USP53-206ENST00000510737 UBE2D3P61077 147 aa3.32□□□□□ -1.88
USP53-206ENST00000510737 UBE2D2P62837 147 aa3.32□□□□□ -1.88
USP53-206ENST00000510737 PDE6HQ13956 83 aa3.32□□□□□ -1.88
USP53-206ENST00000510737 TVP23CQ96ET8 276 aa3.32□□□□□ -1.88
USP53-206ENST00000510737 MGST2Q99735 147 aa3.32□□□□□ -1.88
USP53-206ENST00000510737 ATP5SQ99766 215 aa3.32□□□□□ -1.88
USP53-206ENST00000510737 RPP21Q9H633 154 aaKnown RBP3.32□□□□□ -1.88
USP53-206ENST00000510737 CARHSP1Q9Y2V2 147 aaKnown RBP3.32□□□□□ -1.88
USP53-206ENST00000510737 TRAV21A0A0B4J279 112 aa3.31□□□□□ -1.88
USP53-206ENST00000510737 RBAKDNA6NC62 111 aa3.31□□□□□ -1.88
USP53-206ENST00000510737 A8MWV9 139 aa3.31□□□□□ -1.88
USP53-206ENST00000510737 FNDC10F2Z333 226 aa3.31□□□□□ -1.88
USP53-206ENST00000510737 RAB3DO95716 219 aa3.31□□□□□ -1.88
USP53-206ENST00000510737 TGFBR1P36897 503 aa3.31□□□□□ -1.88
USP53-206ENST00000510737 REG3AQ06141 175 aa3.31□□□□□ -1.88
USP53-206ENST00000510737 MIC13Q5XKP0 118 aa3.31□□□□□ -1.88
USP53-206ENST00000510737 NTM-AS1Q6ZSK4 140 aa3.31□□□□□ -1.88
USP53-206ENST00000510737 PHF5AQ7RTV0 110 aaKnown RBP3.31□□□□□ -1.88
USP53-206ENST00000510737 TMEM229BQ8NBD8 167 aa3.31□□□□□ -1.88
USP53-206ENST00000510737 CCDC59Q9P031 241 aaKnown RBP3.31□□□□□ -1.88
USP53-206ENST00000510737 MTFP1Q9UDX5 166 aa3.31□□□□□ -1.88
USP53-206ENST00000510737 LENEPQ9Y5L5 61 aa3.31□□□□□ -1.88
USP53-206ENST00000510737 TRAV8-4A0A0B4J246 113 aa3.3□□□□□ -1.88
USP53-206ENST00000510737 LOC100506127A0A0U1RQW1 187 aa3.3□□□□□ -1.88
USP53-206ENST00000510737 SMIM31A0A1B0GVY4 71 aa3.3□□□□□ -1.88
USP53-206ENST00000510737 PTTG1O95997 202 aa3.3□□□□□ -1.88
USP53-206ENST00000510737 P01737 135 aa3.3□□□□□ -1.88
USP53-206ENST00000510737 NBEAP1P0C6P0 100 aa3.3□□□□□ -1.88
USP53-206ENST00000510737 METTL15P1P0C7V9 234 aa3.3□□□□□ -1.88
USP53-206ENST00000510737 GZMBP10144 247 aa3.3□□□□□ -1.88
USP53-206ENST00000510737 SLC25A6P12236 298 aa3.3□□□□□ -1.88
USP53-206ENST00000510737 TBPP20226 339 aa3.3□□□□□ -1.88
USP53-206ENST00000510737 LGALSLQ3ZCW2 172 aaPredicted RBP3.3□□□□□ -1.88
USP53-206ENST00000510737 C20orf203Q8NBC4 194 aa3.3□□□□□ -1.88
USP53-206ENST00000510737 PPDPFQ9H3Y8 114 aa3.3□□□□□ -1.88
USP53-206ENST00000510737 PSENENQ9NZ42 101 aa3.3□□□□□ -1.88
USP53-206ENST00000510737 TRBV7-3A0A075B6L6 115 aa3.29□□□□□ -1.88
USP53-206ENST00000510737 F6UZH7 168 aa3.29□□□□□ -1.88
USP53-206ENST00000510737 SNAI2O43623 268 aa3.29□□□□□ -1.88
USP53-206ENST00000510737 ZNF80P51504 273 aaPredicted RBP3.29□□□□□ -1.88
USP53-206ENST00000510737 TMEM14EPQ6UXP3 125 aa3.29□□□□□ -1.88
USP53-206ENST00000510737 C12orf45Q8N5I9 185 aaPredicted RBP3.29□□□□□ -1.88
USP53-206ENST00000510737 OR1L4Q8NGR5 311 aa3.29□□□□□ -1.88
USP53-206ENST00000510737 DIRAS2Q96HU8 199 aa3.29□□□□□ -1.88
USP53-206ENST00000510737 FAM167A-AS1Q96KT0 104 aa3.29□□□□□ -1.88
USP53-206ENST00000510737 SLC25A2Q9BXI2 301 aa3.29□□□□□ -1.88
USP53-206ENST00000510737 COMMD3Q9UBI1 195 aa3.29□□□□□ -1.88
USP53-206ENST00000510737 APOA1P02647 267 aa3.28□□□□□ -1.88
USP53-206ENST00000510737 CAMLGP49069 296 aa3.28□□□□□ -1.88
USP53-206ENST00000510737 TAS2R19P59542 299 aa3.28□□□□□ -1.88
USP53-206ENST00000510737 RANP62826 216 aaKnown RBP3.28□□□□□ -1.88
USP53-206ENST00000510737 KRTAP20-1Q3LI63 56 aa3.28□□□□□ -1.88
USP53-206ENST00000510737 KRTAP6-3Q3LI67 103 aa3.28□□□□□ -1.88
USP53-206ENST00000510737 C9orf116Q5BN46 136 aaPredicted RBP3.28□□□□□ -1.88
USP53-206ENST00000510737 FXYD5Q96DB9 178 aa3.28□□□□□ -1.88
USP53-206ENST00000510737 LINC00526Q96FQ7 95 aa3.28□□□□□ -1.88
USP53-206ENST00000510737 SMIM8Q96KF7 97 aa3.28□□□□□ -1.88
USP53-206ENST00000510737 BCL7BQ9BQE9 202 aa3.28□□□□□ -1.88
USP53-206ENST00000510737 RABL2BQ9UNT1 228 aa3.28□□□□□ -1.88
USP53-206ENST00000510737 IGLV4-60A0A075B6I1 120 aa3.27□□□□□ -1.89
USP53-206ENST00000510737 GVQW2A0A096LPI5 108 aaPredicted RBP3.27□□□□□ -1.89
USP53-206ENST00000510737 TRBV10-1A0A0K0K1A3 114 aa3.27□□□□□ -1.89
USP53-206ENST00000510737 DUXBA0A1W2PPF3 345 aa3.27□□□□□ -1.89
USP53-206ENST00000510737 HPGDSO60760 199 aa3.27□□□□□ -1.89
USP53-206ENST00000510737 EIF3GO75821 320 aaKnown RBP eCLIP3.27□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 76 ms