RNA–Protein interactions for RNA: ENST00000510331.1

LSM6-206, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 3

Gene LSM6, Length 561 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-206ENST00000510331 BIN3Q9NQY0 253 aa12.34□□□□□ -0.43
LSM6-206ENST00000510331 TRBV6-8A0A0A6YYG3 113 aa12.33□□□□□ -0.44
LSM6-206ENST00000510331 TRAV8-3A0A0A6YYJ7 113 aa12.33□□□□□ -0.44
LSM6-206ENST00000510331 XKRY2A2RUG3 117 aa12.33□□□□□ -0.44
LSM6-206ENST00000510331 CTRLP40313 264 aa12.33□□□□□ -0.44
LSM6-206ENST00000510331 CACNG7P62955 275 aa12.33□□□□□ -0.44
LSM6-206ENST00000510331 TOR2AQ5JU69 321 aa12.33□□□□□ -0.44
LSM6-206ENST00000510331 LYZL1Q6UWQ5 148 aa12.33□□□□□ -0.44
LSM6-206ENST00000510331 NUDT10Q8NFP7 164 aa12.33□□□□□ -0.44
LSM6-206ENST00000510331 LYPD6BQ8NI32 183 aa12.33□□□□□ -0.44
LSM6-206ENST00000510331 NUDT11Q96G61 164 aa12.33□□□□□ -0.44
LSM6-206ENST00000510331 RPP21Q9H633 154 aaKnown RBP12.33□□□□□ -0.44
LSM6-206ENST00000510331 KLK12Q9UKR0 248 aa12.33□□□□□ -0.44
LSM6-206ENST00000510331 A0A087WX48 190 aa12.32□□□□□ -0.44
LSM6-206ENST00000510331 IGLV5-52A0A0A0MRZ9 124 aa12.32□□□□□ -0.44
LSM6-206ENST00000510331 LECT2O14960 151 aa12.32□□□□□ -0.44
LSM6-206ENST00000510331 SUMO4Q6EEV6 95 aa12.32□□□□□ -0.44
LSM6-206ENST00000510331 Q8N1X5 172 aa12.32□□□□□ -0.44
LSM6-206ENST00000510331 TM2D2Q9BX73 214 aa12.32□□□□□ -0.44
LSM6-206ENST00000510331 OCC1Q8TAD7 63 aa12.31□□□□□ -0.44
LSM6-206ENST00000510331 CHCHD7Q9BUK0 85 aa12.31□□□□□ -0.44
LSM6-206ENST00000510331 F2Z2F3 143 aa12.3□□□□□ -0.44
LSM6-206ENST00000510331 TMEM250H0YL14 139 aa12.3□□□□□ -0.44
LSM6-206ENST00000510331 M0QY20 66 aa12.3□□□□□ -0.44
LSM6-206ENST00000510331 GCSHP23434 173 aa12.3□□□□□ -0.44
LSM6-206ENST00000510331 CEBPGP53567 150 aa12.3□□□□□ -0.44
LSM6-206ENST00000510331 MPV17L2Q567V2 206 aa12.3□□□□□ -0.44
LSM6-206ENST00000510331 NTN5Q8WTR8 489 aaPredicted RBP12.3□□□□□ -0.44
LSM6-206ENST00000510331 UBE2WQ96B02 151 aa12.3□□□□□ -0.44
LSM6-206ENST00000510331 KCNIP4Q6PIL6 250 aa12.29□□□□□ -0.44
LSM6-206ENST00000510331 NTM-AS1Q6ZSK4 140 aa12.29□□□□□ -0.44
LSM6-206ENST00000510331 FAT1Q14517 4588 aa12.29□□□□□ -0.44
LSM6-206ENST00000510331 IGKV2D-24A0A075B6R9 120 aa12.28□□□□□ -0.44
LSM6-206ENST00000510331 TRGC1P0CF51 173 aa12.28□□□□□ -0.44
LSM6-206ENST00000510331 NTF3P20783 257 aa12.28□□□□□ -0.44
LSM6-206ENST00000510331 XGP55808 180 aa12.28□□□□□ -0.44
LSM6-206ENST00000510331 HAMPP81172 84 aa12.28□□□□□ -0.44
LSM6-206ENST00000510331 CHCHD5Q9BSY4 110 aa12.28□□□□□ -0.44
LSM6-206ENST00000510331 TMEM262E9PQX1 116 aa12.27□□□□□ -0.45
LSM6-206ENST00000510331 C15orf54Q8N8G6 183 aa12.27□□□□□ -0.45
LSM6-206ENST00000510331 SREK1IP1Q8N9Q2 155 aaPredicted RBP12.27□□□□□ -0.45
LSM6-206ENST00000510331 GTSF1Q8WW33 167 aa12.27□□□□□ -0.45
LSM6-206ENST00000510331 BAALCQ8WXS3 180 aa12.27□□□□□ -0.45
LSM6-206ENST00000510331 RMI2Q96E14 147 aa12.27□□□□□ -0.45
LSM6-206ENST00000510331 CNFNQ9BYD5 112 aa12.27□□□□□ -0.45
LSM6-206ENST00000510331 DPH3P1Q9H4G8 78 aa12.27□□□□□ -0.45
LSM6-206ENST00000510331 H7C1H1 209 aa12.26□□□□□ -0.45
LSM6-206ENST00000510331 Q8N976 141 aa12.26□□□□□ -0.45
LSM6-206ENST00000510331 ELOBQ15370 118 aa12.25□□□□□ -0.45
LSM6-206ENST00000510331 TWIST1Q15672 202 aa12.25□□□□□ -0.45
LSM6-206ENST00000510331 FAM210AQ96ND0 272 aa12.25□□□□□ -0.45
LSM6-206ENST00000510331 EIF5A2Q9GZV4 153 aaKnown RBP12.25□□□□□ -0.45
LSM6-206ENST00000510331 DNAH8Q96JB1 4490 aa12.25□□□□□ -0.45
LSM6-206ENST00000510331 IGLV2-33A0A075B6J2 118 aaPredicted RBP12.24□□□□□ -0.45
LSM6-206ENST00000510331 ANGP03950 147 aaKnown RBP12.24□□□□□ -0.45
LSM6-206ENST00000510331 TMEM97Q5BJF2 176 aa12.24□□□□□ -0.45
LSM6-206ENST00000510331 RASL11AQ6T310 242 aa12.24□□□□□ -0.45
LSM6-206ENST00000510331 ATRAIDQ6UW56 229 aa12.24□□□□□ -0.45
LSM6-206ENST00000510331 ENHOQ6UWT2 76 aa12.24□□□□□ -0.45
LSM6-206ENST00000510331 SMIM7Q9BQ49 75 aa12.24□□□□□ -0.45
LSM6-206ENST00000510331 COX11Q9Y6N1 276 aa12.24□□□□□ -0.45
LSM6-206ENST00000510331 TRBV25-1A0A075B6N4 114 aa12.23□□□□□ -0.45
LSM6-206ENST00000510331 TRAV26-2A0A0B4J265 109 aa12.23□□□□□ -0.45
LSM6-206ENST00000510331 GATCO43716 136 aaKnown RBP12.23□□□□□ -0.45
LSM6-206ENST00000510331 CRPP02741 224 aa12.23□□□□□ -0.45
LSM6-206ENST00000510331 GAGE6Q13070 117 aa12.23□□□□□ -0.45
LSM6-206ENST00000510331 WDR73Q6P4I2 378 aa12.23□□□□□ -0.45
LSM6-206ENST00000510331 FAM231DQ6ZW35 169 aa12.23□□□□□ -0.45
LSM6-206ENST00000510331 Q0VG73 95 aa12.22□□□□□ -0.45
LSM6-206ENST00000510331 IQCJQ1A5X6 159 aa12.22□□□□□ -0.45
LSM6-206ENST00000510331 CLPSL2Q6UWE3 100 aa12.22□□□□□ -0.45
LSM6-206ENST00000510331 DEFB104AQ8WTQ1 72 aa12.22□□□□□ -0.45
LSM6-206ENST00000510331 IGHV1-24A0A0C4DH33 117 aa12.21□□□□□ -0.45
LSM6-206ENST00000510331 PKIAP61925 76 aa12.21□□□□□ -0.45
LSM6-206ENST00000510331 RBX1P62877 108 aa12.21□□□□□ -0.45
LSM6-206ENST00000510331 LINC01551Q86U37 167 aa12.21□□□□□ -0.45
LSM6-206ENST00000510331 C1orf43Q9BWL3 253 aa12.21□□□□□ -0.45
LSM6-206ENST00000510331 SRP19P09132 144 aaKnown RBP12.2□□□□□ -0.46
LSM6-206ENST00000510331 FOXA3P55318 350 aaPredicted RBP12.2□□□□□ -0.46
LSM6-206ENST00000510331 PGLYRP4Q96LB8 373 aa12.2□□□□□ -0.46
LSM6-206ENST00000510331 TMEM70Q9BUB7 260 aa12.2□□□□□ -0.46
LSM6-206ENST00000510331 NIT2Q9NQR4 276 aa12.2□□□□□ -0.46
LSM6-206ENST00000510331 ZNF727A8MUV8 499 aa12.19□□□□□ -0.46
LSM6-206ENST00000510331 CT83Q5H943 113 aa12.19□□□□□ -0.46
LSM6-206ENST00000510331 GATD1Q8NB37 220 aa12.19□□□□□ -0.46
LSM6-206ENST00000510331 FAM30AQ9NZY2 134 aa12.19□□□□□ -0.46
LSM6-206ENST00000510331 A8MWL6 223 aa12.18□□□□□ -0.46
LSM6-206ENST00000510331 EPM2AB3EWF7 344 aa12.18□□□□□ -0.46
LSM6-206ENST00000510331 NDUFS6O75380 124 aaKnown RBP12.18□□□□□ -0.46
LSM6-206ENST00000510331 HLA-DQA1P01909 254 aa12.18□□□□□ -0.46
LSM6-206ENST00000510331 LINC01620Q4KN68 170 aa12.18□□□□□ -0.46
LSM6-206ENST00000510331 Q5VSD8 79 aa12.18□□□□□ -0.46
LSM6-206ENST00000510331 RPL39LQ96EH5 51 aaKnown RBP12.18□□□□□ -0.46
LSM6-206ENST00000510331 LINC00269Q8N2A0 174 aa12.17□□□□□ -0.46
LSM6-206ENST00000510331 TMEM243Q9BU79 118 aa12.17□□□□□ -0.46
LSM6-206ENST00000510331 PRR34Q9NV39 138 aa12.17□□□□□ -0.46
LSM6-206ENST00000510331 SMR3BP02814 79 aaPredicted RBP12.16□□□□□ -0.46
LSM6-206ENST00000510331 MIAQ16674 131 aa12.16□□□□□ -0.46
LSM6-206ENST00000510331 VPS13BQ7Z7G8 4022 aa12.16□□□□□ -0.46
LSM6-206ENST00000510331 C9JQL5 133 aa12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms