RNA–Protein interactions for RNA: ENST00000510171.3

DDX41-211, Transcript of DEAD-box helicase 41, humanhuman

TSL 3

Gene DDX41, Length 569 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-211ENST00000510171 SSBP4Q9BWG4 385 aaPredicted RBP6.76□□□□□ -1.33
DDX41-211ENST00000510171 UBR4Q5T4S7 5183 aa6.76□□□□□ -1.33
DDX41-211ENST00000510171 TMEM262E9PQX1 116 aa6.75□□□□□ -1.33
DDX41-211ENST00000510171 SNAI2O43623 268 aa6.75□□□□□ -1.33
DDX41-211ENST00000510171 RPL35P42766 123 aaKnown RBP6.75□□□□□ -1.33
DDX41-211ENST00000510171 UBE2D3P61077 147 aa6.75□□□□□ -1.33
DDX41-211ENST00000510171 UBE2D2P62837 147 aa6.75□□□□□ -1.33
DDX41-211ENST00000510171 RPL19P84098 196 aaKnown RBP6.75□□□□□ -1.33
DDX41-211ENST00000510171 SPANXN1Q5VSR9 72 aa6.75□□□□□ -1.33
DDX41-211ENST00000510171 PRR27Q6MZM9 219 aa6.75□□□□□ -1.33
DDX41-211ENST00000510171 OR10G8Q8NGN5 311 aa6.75□□□□□ -1.33
DDX41-211ENST00000510171 OR10AG1Q8NH19 301 aa6.75□□□□□ -1.33
DDX41-211ENST00000510171 C11orf52Q96A22 123 aa6.75□□□□□ -1.33
DDX41-211ENST00000510171 DAZAP1Q96EP5 407 aaKnown RBP6.75□□□□□ -1.33
DDX41-211ENST00000510171 C1orf43Q9BWL3 253 aa6.75□□□□□ -1.33
DDX41-211ENST00000510171 GNG13Q9P2W3 67 aa6.75□□□□□ -1.33
DDX41-211ENST00000510171 ZNF56Q15929 161 aa6.74□□□□□ -1.33
DDX41-211ENST00000510171 SMIM12Q96EX1 92 aa6.74□□□□□ -1.33
DDX41-211ENST00000510171 LRP1Q07954 4544 aaKnown RBP6.73□□□□□ -1.33
DDX41-211ENST00000510171 TRBV6-8A0A0A6YYG3 113 aa6.73□□□□□ -1.33
DDX41-211ENST00000510171 PDE6DO43924 150 aa6.73□□□□□ -1.33
DDX41-211ENST00000510171 SMIM17P0DL12 118 aa6.73□□□□□ -1.33
DDX41-211ENST00000510171 HNRNPA3P51991 378 aaKnown RBP6.73□□□□□ -1.33
DDX41-211ENST00000510171 PKIAP61925 76 aa6.73□□□□□ -1.33
DDX41-211ENST00000510171 ENHOQ6UWT2 76 aa6.73□□□□□ -1.33
DDX41-211ENST00000510171 AP1S3Q96PC3 154 aa6.73□□□□□ -1.33
DDX41-211ENST00000510171 DERL1Q9BUN8 251 aa6.73□□□□□ -1.33
DDX41-211ENST00000510171 F5H697 171 aa6.72□□□□□ -1.33
DDX41-211ENST00000510171 IFNA1P01562 189 aa6.72□□□□□ -1.33
DDX41-211ENST00000510171 CRPP02741 224 aa6.72□□□□□ -1.33
DDX41-211ENST00000510171 GNG4P50150 75 aa6.72□□□□□ -1.33
DDX41-211ENST00000510171 RPS20P60866 119 aaKnown RBP6.72□□□□□ -1.33
DDX41-211ENST00000510171 CCL20P78556 96 aa6.72□□□□□ -1.33
DDX41-211ENST00000510171 TMEM97Q5BJF2 176 aa6.72□□□□□ -1.33
DDX41-211ENST00000510171 CENPWQ5EE01 88 aa6.72□□□□□ -1.33
DDX41-211ENST00000510171 DGAT2L7PQ6IED9 249 aa6.72□□□□□ -1.33
DDX41-211ENST00000510171 TCTE3Q8IZS6 198 aa6.72□□□□□ -1.33
DDX41-211ENST00000510171 C15orf54Q8N8G6 183 aa6.72□□□□□ -1.33
DDX41-211ENST00000510171 NEXN-AS1Q8NBZ9 246 aa6.72□□□□□ -1.33
DDX41-211ENST00000510171 XKRY2A2RUG3 117 aa6.71□□□□□ -1.34
DDX41-211ENST00000510171 USP17L23D6RBM5 183 aa6.71□□□□□ -1.34
DDX41-211ENST00000510171 SULT1A2P50226 295 aa6.71□□□□□ -1.34
DDX41-211ENST00000510171 MEF2BQ02080 365 aaPredicted RBP6.71□□□□□ -1.34
DDX41-211ENST00000510171 C9orf163Q8N9P6 203 aa6.71□□□□□ -1.34
DDX41-211ENST00000510171 BIN3Q9NQY0 253 aa6.71□□□□□ -1.34
DDX41-211ENST00000510171 MUC21A0A0G2JKD1 596 aa6.7□□□□□ -1.34
DDX41-211ENST00000510171 MUC21A0A140T8X8 626 aa6.7□□□□□ -1.34
DDX41-211ENST00000510171 H7C1H1 209 aa6.7□□□□□ -1.34
DDX41-211ENST00000510171 HLA-DQA1P01909 254 aa6.7□□□□□ -1.34
DDX41-211ENST00000510171 ANGP03950 147 aaKnown RBP6.7□□□□□ -1.34
DDX41-211ENST00000510171 PRSS1P07477 247 aa6.7□□□□□ -1.34
DDX41-211ENST00000510171 IGLC6P0CF74 106 aa6.7□□□□□ -1.34
DDX41-211ENST00000510171 MT1HL1P0DM35 61 aa6.7□□□□□ -1.34
DDX41-211ENST00000510171 TAGLN2P37802 199 aaKnown RBP6.7□□□□□ -1.34
DDX41-211ENST00000510171 CACNG7P62955 275 aa6.7□□□□□ -1.34
DDX41-211ENST00000510171 Q6ZRU5 148 aa6.7□□□□□ -1.34
DDX41-211ENST00000510171 SLC51BQ86UW2 128 aa6.7□□□□□ -1.34
DDX41-211ENST00000510171 FER1L6-AS1Q8NA97 138 aa6.7□□□□□ -1.34
DDX41-211ENST00000510171 OR2D3Q8NGH3 330 aa6.7□□□□□ -1.34
DDX41-211ENST00000510171 VAX2Q9UIW0 290 aa6.7□□□□□ -1.34
DDX41-211ENST00000510171 KIF25-AS1Q9Y6Z4 181 aa6.7□□□□□ -1.34
DDX41-211ENST00000510171 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.7□□□□□ -1.34
DDX41-211ENST00000510171 C19orf71A6NCJ1 209 aa6.69□□□□□ -1.34
DDX41-211ENST00000510171 F2Z2F3 143 aa6.69□□□□□ -1.34
DDX41-211ENST00000510171 P01737 135 aa6.69□□□□□ -1.34
DDX41-211ENST00000510171 BCL2P10415 239 aa6.69□□□□□ -1.34
DDX41-211ENST00000510171 SSTP61278 116 aa6.69□□□□□ -1.34
DDX41-211ENST00000510171 MIAQ16674 131 aa6.69□□□□□ -1.34
DDX41-211ENST00000510171 MPV17L2Q567V2 206 aa6.69□□□□□ -1.34
DDX41-211ENST00000510171 CHCHD5Q9BSY4 110 aa6.69□□□□□ -1.34
DDX41-211ENST00000510171 TPPP3Q9BW30 176 aa6.69□□□□□ -1.34
DDX41-211ENST00000510171 MED9Q9NWA0 146 aa6.69□□□□□ -1.34
DDX41-211ENST00000510171 RAB19A4D1S5 217 aa6.68□□□□□ -1.34
DDX41-211ENST00000510171 SDIM1Q6ZPB5 146 aa6.68□□□□□ -1.34
DDX41-211ENST00000510171 TRBV25-1A0A075B6N4 114 aa6.67□□□□□ -1.34
DDX41-211ENST00000510171 PANO1I0J062 215 aa6.67□□□□□ -1.34
DDX41-211ENST00000510171 M0QY20 66 aa6.67□□□□□ -1.34
DDX41-211ENST00000510171 MGPP08493 103 aa6.67□□□□□ -1.34
DDX41-211ENST00000510171 TRGC1P0CF51 173 aa6.67□□□□□ -1.34
DDX41-211ENST00000510171 GZMBP10144 247 aa6.67□□□□□ -1.34
DDX41-211ENST00000510171 DPH3Q96FX2 82 aa6.67□□□□□ -1.34
DDX41-211ENST00000510171 TRBV20OR9-2A0A075B6H5 130 aa6.66□□□□□ -1.34
DDX41-211ENST00000510171 IQCJQ1A5X6 159 aa6.66□□□□□ -1.34
DDX41-211ENST00000510171 WDR73Q6P4I2 378 aa6.66□□□□□ -1.34
DDX41-211ENST00000510171 NTM-AS1Q6ZSK4 140 aa6.66□□□□□ -1.34
DDX41-211ENST00000510171 C9orf62Q8N4C0 152 aa6.66□□□□□ -1.34
DDX41-211ENST00000510171 CLRN3Q8NCR9 226 aa6.66□□□□□ -1.34
DDX41-211ENST00000510171 PRR34Q9NV39 138 aa6.66□□□□□ -1.34
DDX41-211ENST00000510171 FAT3Q8TDW7 4589 aa6.66□□□□□ -1.34
DDX41-211ENST00000510171 IGHV1-24A0A0C4DH33 117 aa6.65□□□□□ -1.34
DDX41-211ENST00000510171 CTRLP40313 264 aa6.65□□□□□ -1.34
DDX41-211ENST00000510171 RBX1P62877 108 aa6.65□□□□□ -1.34
DDX41-211ENST00000510171 SUMO4Q6EEV6 95 aa6.65□□□□□ -1.34
DDX41-211ENST00000510171 KRTAP26-1Q6PEX3 210 aa6.65□□□□□ -1.34
DDX41-211ENST00000510171 RASL11AQ6T310 242 aa6.65□□□□□ -1.34
DDX41-211ENST00000510171 LYZL1Q6UWQ5 148 aa6.65□□□□□ -1.34
DDX41-211ENST00000510171 AKAP14Q86UN6 197 aa6.65□□□□□ -1.34
DDX41-211ENST00000510171 LINC00269Q8N2A0 174 aa6.65□□□□□ -1.34
DDX41-211ENST00000510171 DPH3P1Q9H4G8 78 aa6.65□□□□□ -1.34
DDX41-211ENST00000510171 NTF3P20783 257 aa6.64□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 114.5 ms