RNA–Protein interactions for RNA: ENST00000508357.5

PTPN20-218, Transcript of protein tyrosine phosphatase, non-receptor type 20, humanhuman

TSL 1 (best)

Gene PTPN20, Length 1,213 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20-218ENST00000508357 NAT8Q9UHE5 227 aa8.36□□□□□ -1.07
PTPN20-218ENST00000508357 RYR1P21817 5038 aa8.35□□□□□ -1.07
PTPN20-218ENST00000508357 APOBP04114 4563 aaKnown RBP8.35□□□□□ -1.07
PTPN20-218ENST00000508357 M0QY20 66 aa8.35□□□□□ -1.07
PTPN20-218ENST00000508357 FOXA3P55318 350 aaPredicted RBP8.35□□□□□ -1.07
PTPN20-218ENST00000508357 ADIRFQ15847 76 aa8.35□□□□□ -1.07
PTPN20-218ENST00000508357 TMEM241Q24JQ0 296 aa8.35□□□□□ -1.07
PTPN20-218ENST00000508357 LINC01556Q5JQF7 62 aa8.35□□□□□ -1.07
PTPN20-218ENST00000508357 CLLU1Q5K131 121 aa8.35□□□□□ -1.07
PTPN20-218ENST00000508357 PGLYRP4Q96LB8 373 aa8.35□□□□□ -1.07
PTPN20-218ENST00000508357 SMDT1Q9H4I9 107 aa8.35□□□□□ -1.07
PTPN20-218ENST00000508357 TRBV7-3A0A075B6L6 115 aa8.34□□□□□ -1.07
PTPN20-218ENST00000508357 IGHV3-38A0A0C4DH36 116 aa8.34□□□□□ -1.07
PTPN20-218ENST00000508357 A8MWL6 223 aa8.34□□□□□ -1.07
PTPN20-218ENST00000508357 RPL36AP83881 106 aaKnown RBP8.34□□□□□ -1.07
PTPN20-218ENST00000508357 OR10J3Q5JRS4 329 aa8.34□□□□□ -1.07
PTPN20-218ENST00000508357 TSKUQ8WUA8 353 aa8.34□□□□□ -1.07
PTPN20-218ENST00000508357 RPL36ALQ969Q0 106 aaKnown RBP8.34□□□□□ -1.07
PTPN20-218ENST00000508357 DPH3P1Q9H4G8 78 aa8.34□□□□□ -1.07
PTPN20-218ENST00000508357 HIGD1CA8MV81 97 aa8.33□□□□□ -1.08
PTPN20-218ENST00000508357 F5H697 171 aa8.33□□□□□ -1.08
PTPN20-218ENST00000508357 TRGC1P0CF51 173 aa8.33□□□□□ -1.08
PTPN20-218ENST00000508357 SMIM17P0DL12 118 aa8.33□□□□□ -1.08
PTPN20-218ENST00000508357 TWIST1Q15672 202 aa8.33□□□□□ -1.08
PTPN20-218ENST00000508357 SOHLH1Q5JUK2 328 aa8.33□□□□□ -1.08
PTPN20-218ENST00000508357 TRAV8-6A0A0B4J262 113 aa8.32□□□□□ -1.08
PTPN20-218ENST00000508357 TRAV26-2A0A0B4J265 109 aa8.32□□□□□ -1.08
PTPN20-218ENST00000508357 IGHV3-30P01768 117 aa8.32□□□□□ -1.08
PTPN20-218ENST00000508357 IGHV3-33P01772 117 aa8.32□□□□□ -1.08
PTPN20-218ENST00000508357 IGHV3-30-3P0DP02 117 aa8.32□□□□□ -1.08
PTPN20-218ENST00000508357 IGHV3-30-5P0DP03 117 aa8.32□□□□□ -1.08
PTPN20-218ENST00000508357 BTF3P20290 206 aaKnown RBP8.32□□□□□ -1.08
PTPN20-218ENST00000508357 RAB14P61106 215 aa8.32□□□□□ -1.08
PTPN20-218ENST00000508357 NTM-AS1Q6ZSK4 140 aa8.32□□□□□ -1.08
PTPN20-218ENST00000508357 GFRA4Q9GZZ7 299 aa8.32□□□□□ -1.08
PTPN20-218ENST00000508357 FAM231BA6NCW3 169 aa8.3□□□□□ -1.08
PTPN20-218ENST00000508357 GAS8-AS1O95177 125 aa8.3□□□□□ -1.08
PTPN20-218ENST00000508357 ADCYAP1P18509 176 aa8.3□□□□□ -1.08
PTPN20-218ENST00000508357 RASL11AQ6T310 242 aa8.3□□□□□ -1.08
PTPN20-218ENST00000508357 NIT1Q86X76 327 aa8.3□□□□□ -1.08
PTPN20-218ENST00000508357 C15orf54Q8N8G6 183 aa8.3□□□□□ -1.08
PTPN20-218ENST00000508357 GATD1Q8NB37 220 aa8.3□□□□□ -1.08
PTPN20-218ENST00000508357 NUP35Q8NFH5 326 aa8.3□□□□□ -1.08
PTPN20-218ENST00000508357 HSPG2P98160 4391 aa8.3□□□□□ -1.08
PTPN20-218ENST00000508357 DNAH8Q96JB1 4490 aa8.29□□□□□ -1.08
PTPN20-218ENST00000508357 A0A087WWC5 75 aa8.29□□□□□ -1.08
PTPN20-218ENST00000508357 TRBV6-8A0A0A6YYG3 113 aa8.29□□□□□ -1.08
PTPN20-218ENST00000508357 A0A1B0GUT8 65 aa8.29□□□□□ -1.08
PTPN20-218ENST00000508357 SMIM27A0A1W2PRY6 76 aa8.29□□□□□ -1.08
PTPN20-218ENST00000508357 IBA57-AS1B1ANH7 110 aa8.29□□□□□ -1.08
PTPN20-218ENST00000508357 K7EP13 123 aa8.29□□□□□ -1.08
PTPN20-218ENST00000508357 LORP23490 312 aaPredicted RBP8.29□□□□□ -1.08
PTPN20-218ENST00000508357 DAZ4Q86SG3 579 aaKnown RBP8.29□□□□□ -1.08
PTPN20-218ENST00000508357 RNF185Q96GF1 192 aa8.29□□□□□ -1.08
PTPN20-218ENST00000508357 DNAJC30Q96LL9 226 aa8.29□□□□□ -1.08
PTPN20-218ENST00000508357 DAZ3Q9NR90 486 aaKnown RBP8.29□□□□□ -1.08
PTPN20-218ENST00000508357 C10orf126Q8N4M7 172 aa8.28□□□□□ -1.08
PTPN20-218ENST00000508357 RPL39LQ96EH5 51 aaKnown RBP8.28□□□□□ -1.08
PTPN20-218ENST00000508357 TRAV9-2A0A087WT02 112 aa8.27□□□□□ -1.09
PTPN20-218ENST00000508357 H7C1H1 209 aa8.27□□□□□ -1.09
PTPN20-218ENST00000508357 DEFB104AQ8WTQ1 72 aa8.27□□□□□ -1.09
PTPN20-218ENST00000508357 TMEM191AQ9H0A3 160 aa8.27□□□□□ -1.09
PTPN20-218ENST00000508357 Q9HAA7 133 aa8.27□□□□□ -1.09
PTPN20-218ENST00000508357 NIT2Q9NQR4 276 aa8.27□□□□□ -1.09
PTPN20-218ENST00000508357 KRTAP10-2P60368 255 aa8.26□□□□□ -1.09
PTPN20-218ENST00000508357 LAGE3Q14657 143 aa8.26□□□□□ -1.09
PTPN20-218ENST00000508357 MPV17L2Q567V2 206 aa8.26□□□□□ -1.09
PTPN20-218ENST00000508357 AMN1Q8IY45 258 aa8.26□□□□□ -1.09
PTPN20-218ENST00000508357 NAT8BQ9UHF3 227 aa8.26□□□□□ -1.09
PTPN20-218ENST00000508357 A0A1B0GXF2 115 aa8.25□□□□□ -1.09
PTPN20-218ENST00000508357 RPS10P46783 165 aaKnown RBP8.25□□□□□ -1.09
PTPN20-218ENST00000508357 IQCJQ1A5X6 159 aa8.25□□□□□ -1.09
PTPN20-218ENST00000508357 NFE4Q86UQ8 179 aa8.25□□□□□ -1.09
PTPN20-218ENST00000508357 BORCS7Q96B45 105 aa8.25□□□□□ -1.09
PTPN20-218ENST00000508357 SMKR1H3BMG3 65 aa8.24□□□□□ -1.09
PTPN20-218ENST00000508357 NCR2O95944 276 aa8.24□□□□□ -1.09
PTPN20-218ENST00000508357 RAB4AP20338 218 aa8.24□□□□□ -1.09
PTPN20-218ENST00000508357 FUSP35637 526 aaKnown RBP eCLIP8.24□□□□□ -1.09
PTPN20-218ENST00000508357 RIGQ13278 110 aa8.24□□□□□ -1.09
PTPN20-218ENST00000508357 UQCC3Q6UW78 93 aa8.24□□□□□ -1.09
PTPN20-218ENST00000508357 SMIM15Q7Z3B0 74 aa8.24□□□□□ -1.09
PTPN20-218ENST00000508357 COMMD7Q86VX2 200 aa8.24□□□□□ -1.09
PTPN20-218ENST00000508357 A0A087WTM6 91 aa8.23□□□□□ -1.09
PTPN20-218ENST00000508357 IGHV1-24A0A0C4DH33 117 aa8.23□□□□□ -1.09
PTPN20-218ENST00000508357 TRBV6-5A0A0K0K1A5 114 aa8.23□□□□□ -1.09
PTPN20-218ENST00000508357 TMEM218A2RU14 115 aa8.23□□□□□ -1.09
PTPN20-218ENST00000508357 LRCOL1A6NCL2 159 aa8.23□□□□□ -1.09
PTPN20-218ENST00000508357 PNRC1Q12796 327 aaPredicted RBP8.23□□□□□ -1.09
PTPN20-218ENST00000508357 GAGE6Q13070 117 aa8.23□□□□□ -1.09
PTPN20-218ENST00000508357 WFDC2Q14508 124 aa8.23□□□□□ -1.09
PTPN20-218ENST00000508357 SPATA12Q7Z6I5 190 aa8.23□□□□□ -1.09
PTPN20-218ENST00000508357 Q8N976 141 aa8.23□□□□□ -1.09
PTPN20-218ENST00000508357 FRZBQ92765 325 aa8.23□□□□□ -1.09
PTPN20-218ENST00000508357 CHCHD5Q9BSY4 110 aa8.23□□□□□ -1.09
PTPN20-218ENST00000508357 CHCHD7Q9BUK0 85 aa8.23□□□□□ -1.09
PTPN20-218ENST00000508357 KLK12Q9UKR0 248 aa8.23□□□□□ -1.09
PTPN20-218ENST00000508357 TRBV25-1A0A075B6N4 114 aa8.22□□□□□ -1.09
PTPN20-218ENST00000508357 LINC00862A6NCI5 91 aa8.22□□□□□ -1.09
PTPN20-218ENST00000508357 SDHAF1A6NFY7 115 aa8.22□□□□□ -1.09
PTPN20-218ENST00000508357 TMEM97Q5BJF2 176 aa8.22□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 66 ms