RNA–Protein interactions for RNA: ENST00000508049.1

CLOCK-207, Transcript of clock circadian regulator, humanhuman

TSL 3

Gene CLOCK, Length 401 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLOCK-207ENST00000508049 TPM3P06753 285 aa-0.92□□□□□ -2.56
CLOCK-207ENST00000508049 CRYGSP22914 178 aa-0.92□□□□□ -2.56
CLOCK-207ENST00000508049 SDC2P34741 201 aa-0.92□□□□□ -2.56
CLOCK-207ENST00000508049 SRP9P49458 86 aaKnown RBP-0.92□□□□□ -2.56
CLOCK-207ENST00000508049 EDDM3BP56851 147 aa-0.92□□□□□ -2.56
CLOCK-207ENST00000508049 ARF6P62330 175 aa-0.92□□□□□ -2.56
CLOCK-207ENST00000508049 DEFB135Q30KP9 77 aa-0.92□□□□□ -2.56
CLOCK-207ENST00000508049 C3orf33Q6P1S2 294 aa-0.92□□□□□ -2.56
CLOCK-207ENST00000508049 LINC00305Q7Z4B0 112 aa-0.92□□□□□ -2.56
CLOCK-207ENST00000508049 DEFB123Q8N688 67 aa-0.92□□□□□ -2.56
CLOCK-207ENST00000508049 LXNQ9BS40 222 aa-0.92□□□□□ -2.56
CLOCK-207ENST00000508049 TAS2R8Q9NYW2 309 aa-0.92□□□□□ -2.56
CLOCK-207ENST00000508049 LAMTOR3Q9UHA4 124 aa-0.92□□□□□ -2.56
CLOCK-207ENST00000508049 COL4A6Q14031 1691 aa-0.92□□□□□ -2.56
CLOCK-207ENST00000508049 FMN2Q9NZ56 1722 aa-0.92□□□□□ -2.56
CLOCK-207ENST00000508049 CDK5RAP2Q96SN8 1893 aa-0.92□□□□□ -2.56
CLOCK-207ENST00000508049 UHRF1BP1LA0JNW5 1464 aa-0.92□□□□□ -2.56
CLOCK-207ENST00000508049 DNAH2Q9P225 4427 aa-0.92□□□□□ -2.56
CLOCK-207ENST00000508049 IBTKQ9P2D0 1353 aaPredicted RBP-0.93□□□□□ -2.56
CLOCK-207ENST00000508049 GOLGA4Q13439 2230 aaKnown RBP-0.93□□□□□ -2.56
CLOCK-207ENST00000508049 TRAV12-3A0A0B4J271 114 aa-0.93□□□□□ -2.56
CLOCK-207ENST00000508049 PNMA8CA0A1B0GUJ8 204 aa-0.93□□□□□ -2.56
CLOCK-207ENST00000508049 MAP1LC3B2A6NCE7 125 aa-0.93□□□□□ -2.56
CLOCK-207ENST00000508049 H3BMG7 143 aa-0.93□□□□□ -2.56
CLOCK-207ENST00000508049 NPFFO15130 113 aa-0.93□□□□□ -2.56
CLOCK-207ENST00000508049 S100A6P06703 90 aa-0.93□□□□□ -2.56
CLOCK-207ENST00000508049 PPP1R2P41236 205 aa-0.93□□□□□ -2.56
CLOCK-207ENST00000508049 CEBPGP53567 150 aa-0.93□□□□□ -2.56
CLOCK-207ENST00000508049 CRYBA4P53673 196 aa-0.93□□□□□ -2.56
CLOCK-207ENST00000508049 TPM4P67936 248 aa-0.93□□□□□ -2.56
CLOCK-207ENST00000508049 PLGLB1Q02325 96 aa-0.93□□□□□ -2.56
CLOCK-207ENST00000508049 SPCS2Q15005 226 aa-0.93□□□□□ -2.56
CLOCK-207ENST00000508049 PIGYQ3MUY2 71 aa-0.93□□□□□ -2.56
CLOCK-207ENST00000508049 TEX29Q8N6K0 151 aa-0.93□□□□□ -2.56
CLOCK-207ENST00000508049 BRK1Q8WUW1 75 aa-0.93□□□□□ -2.56
CLOCK-207ENST00000508049 MED11Q9P086 117 aa-0.93□□□□□ -2.56
CLOCK-207ENST00000508049 METTL1Q9UBP6 276 aaKnown RBP-0.93□□□□□ -2.56
CLOCK-207ENST00000508049 SS18L2Q9UHA2 77 aa-0.93□□□□□ -2.56
CLOCK-207ENST00000508049 ERG28Q9UKR5 140 aa-0.93□□□□□ -2.56
CLOCK-207ENST00000508049 BTAF1O14981 1849 aa-0.94□□□□□ -2.56
CLOCK-207ENST00000508049 ADCY9O60503 1353 aa-0.94□□□□□ -2.56
CLOCK-207ENST00000508049 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP-0.94□□□□□ -2.562e-9■■■■■ 35.4
CLOCK-207ENST00000508049 PPP5D1E7EU14 171 aa-0.94□□□□□ -2.56
CLOCK-207ENST00000508049 J3KT08 172 aa-0.94□□□□□ -2.56
CLOCK-207ENST00000508049 UQCRQO14949 82 aa-0.94□□□□□ -2.56
CLOCK-207ENST00000508049 ATG12O94817 140 aa-0.94□□□□□ -2.56
CLOCK-207ENST00000508049 S100A11P31949 105 aa-0.94□□□□□ -2.56
CLOCK-207ENST00000508049 LSM3P62310 102 aaKnown RBP-0.94□□□□□ -2.56
CLOCK-207ENST00000508049 SPA17Q15506 151 aa-0.94□□□□□ -2.56
CLOCK-207ENST00000508049 DEFB112Q30KQ8 113 aa-0.94□□□□□ -2.56
CLOCK-207ENST00000508049 HSD17B12Q53GQ0 312 aa-0.94□□□□□ -2.56
CLOCK-207ENST00000508049 CFAP126Q5VTH2 177 aa-0.94□□□□□ -2.56
CLOCK-207ENST00000508049 CROCCP2Q86T23 111 aa-0.94□□□□□ -2.56
CLOCK-207ENST00000508049 DEFB105AQ8NG35 78 aa-0.94□□□□□ -2.56
CLOCK-207ENST00000508049 DYNLRB2Q8TF09 96 aa-0.94□□□□□ -2.56
CLOCK-207ENST00000508049 GINS3Q9BRX5 216 aa-0.94□□□□□ -2.56
CLOCK-207ENST00000508049 CBLN4Q9NTU7 201 aa-0.94□□□□□ -2.56
CLOCK-207ENST00000508049 KIF21AQ7Z4S6 1674 aa-0.94□□□□□ -2.56
CLOCK-207ENST00000508049 DNAH9Q9NYC9 4486 aa-0.95□□□□□ -2.56
CLOCK-207ENST00000508049 ADGRB1O14514 1584 aa-0.95□□□□□ -2.56
CLOCK-207ENST00000508049 CASKIN1Q8WXD9 1431 aa-0.95□□□□□ -2.56
CLOCK-207ENST00000508049 NSD3Q9BZ95 1437 aa-0.95□□□□□ -2.56
CLOCK-207ENST00000508049 KIAA0556O60303 1618 aa-0.95□□□□□ -2.56
CLOCK-207ENST00000508049 CCDC179H3BU77 68 aa-0.95□□□□□ -2.56
CLOCK-207ENST00000508049 TNFP01375 233 aa-0.95□□□□□ -2.56
CLOCK-207ENST00000508049 SLC25A5P05141 298 aaKnown RBP-0.95□□□□□ -2.56
CLOCK-207ENST00000508049 CTXN2P0C2S0 81 aa-0.95□□□□□ -2.56
CLOCK-207ENST00000508049 S100A3P33764 101 aa-0.95□□□□□ -2.56
CLOCK-207ENST00000508049 RPL22P35268 128 aaKnown RBP-0.95□□□□□ -2.56
CLOCK-207ENST00000508049 CDKN2CP42773 168 aa-0.95□□□□□ -2.56
CLOCK-207ENST00000508049 PCBD1P61457 104 aa-0.95□□□□□ -2.56
CLOCK-207ENST00000508049 COTL1Q14019 142 aa-0.95□□□□□ -2.56
CLOCK-207ENST00000508049 RGS21Q2M5E4 152 aa-0.95□□□□□ -2.56
CLOCK-207ENST00000508049 DHRS4L2Q6PKH6 230 aa-0.95□□□□□ -2.56
CLOCK-207ENST00000508049 BAGE3Q86Y29 109 aa-0.95□□□□□ -2.56
CLOCK-207ENST00000508049 FXYD6Q9H0Q3 95 aa-0.95□□□□□ -2.56
CLOCK-207ENST00000508049 A2MP01023 1474 aa-0.95□□□□□ -2.56
CLOCK-207ENST00000508049 GAPVD1Q14C86 1478 aa-0.95□□□□□ -2.56
CLOCK-207ENST00000508049 ANK3Q12955 4377 aaKnown RBP-0.95□□□□□ -2.56
CLOCK-207ENST00000508049 TRIOO75962 3097 aa-0.95□□□□□ -2.56
CLOCK-207ENST00000508049 TCHHQ07283 1943 aa-0.95□□□□□ -2.56
CLOCK-207ENST00000508049 ADAMTS12P58397 1594 aa-0.96□□□□□ -2.56
CLOCK-207ENST00000508049 PTPN23Q9H3S7 1636 aa-0.96□□□□□ -2.56
CLOCK-207ENST00000508049 YTHDC2Q9H6S0 1430 aaKnown RBP-0.96□□□□□ -2.56
CLOCK-207ENST00000508049 KNL1Q8NG31 2342 aa-0.96□□□□□ -2.56
CLOCK-207ENST00000508049 H0YJX3 145 aa-0.96□□□□□ -2.56
CLOCK-207ENST00000508049 M0QZK8 103 aa-0.96□□□□□ -2.56
CLOCK-207ENST00000508049 IFNA1P01562 189 aa-0.96□□□□□ -2.56
CLOCK-207ENST00000508049 TCRAP04437 139 aa-0.96□□□□□ -2.56
CLOCK-207ENST00000508049 UBE2D1P51668 147 aa-0.96□□□□□ -2.56
CLOCK-207ENST00000508049 BASP1P80723 227 aaKnown RBP-0.96□□□□□ -2.56
CLOCK-207ENST00000508049 TMED2Q15363 201 aa-0.96□□□□□ -2.56
CLOCK-207ENST00000508049 PTRHD1Q6GMV3 140 aaKnown RBP-0.96□□□□□ -2.56
CLOCK-207ENST00000508049 TMEM91Q6ZNR0 172 aa-0.96□□□□□ -2.56
CLOCK-207ENST00000508049 STX19Q8N4C7 294 aa-0.96□□□□□ -2.56
CLOCK-207ENST00000508049 AGPAT4-IT1Q9H0P7 198 aa-0.96□□□□□ -2.56
CLOCK-207ENST00000508049 SLC35B3Q9H1N7 401 aa-0.96□□□□□ -2.56
CLOCK-207ENST00000508049 NPVFQ9HCQ7 196 aa-0.96□□□□□ -2.56
CLOCK-207ENST00000508049 LAMTOR2Q9Y2Q5 125 aa-0.96□□□□□ -2.56
CLOCK-207ENST00000508049 ARL2BPQ9Y2Y0 163 aa-0.96□□□□□ -2.56
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms