RNA–Protein interactions for RNA: ENST00000508006.1

SNCB-204, Transcript of synuclein beta, humanhuman

TSL 2

Gene SNCB, Length 969 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCB-204ENST00000508006 LINC00336Q6ZUF6 198 aa15.47■□□□□ 0.07
SNCB-204ENST00000508006 RPL36ALQ969Q0 106 aaKnown RBP15.47■□□□□ 0.07
SNCB-204ENST00000508006 BTF3L4Q96K17 158 aa15.47■□□□□ 0.07
SNCB-204ENST00000508006 RPS10P5Q9NQ39 176 aa15.47■□□□□ 0.07
SNCB-204ENST00000508006 LOC100131303A0A0U1RQF7 123 aa15.46■□□□□ 0.07
SNCB-204ENST00000508006 A0A1B0GXF2 115 aa15.46■□□□□ 0.07
SNCB-204ENST00000508006 S100PP25815 95 aa15.46■□□□□ 0.07
SNCB-204ENST00000508006 DNAJC30Q96LL9 226 aa15.46■□□□□ 0.07
SNCB-204ENST00000508006 TRBV7-3A0A075B6L6 115 aa15.45■□□□□ 0.06
SNCB-204ENST00000508006 M0QY20 66 aa15.45■□□□□ 0.06
SNCB-204ENST00000508006 LINC00694P0DN24 101 aa15.45■□□□□ 0.06
SNCB-204ENST00000508006 TIRAPP58753 221 aa15.45■□□□□ 0.06
SNCB-204ENST00000508006 SUMO4Q6EEV6 95 aa15.45■□□□□ 0.06
SNCB-204ENST00000508006 GATD1Q8NB37 220 aa15.45■□□□□ 0.06
SNCB-204ENST00000508006 MRPL54Q6P161 138 aaKnown RBP15.44■□□□□ 0.06
SNCB-204ENST00000508006 RASL11AQ6T310 242 aa15.44■□□□□ 0.06
SNCB-204ENST00000508006 CAMPP49913 170 aa15.43■□□□□ 0.06
SNCB-204ENST00000508006 ESRGQ1W209 222 aa15.43■□□□□ 0.06
SNCB-204ENST00000508006 LYPD5Q6UWN5 251 aa15.43■□□□□ 0.06
SNCB-204ENST00000508006 UBE2DNLQ8IWF7 75 aa15.43■□□□□ 0.06
SNCB-204ENST00000508006 ATP6V0E2Q8NHE4 81 aa15.43■□□□□ 0.06
SNCB-204ENST00000508006 DNAH6Q9C0G6 4158 aa15.42■□□□□ 0.06
SNCB-204ENST00000508006 GAGE12JA6NER3 117 aa15.42■□□□□ 0.06
SNCB-204ENST00000508006 RAB4AP20338 218 aa15.42■□□□□ 0.06
SNCB-204ENST00000508006 GAGE1Q13065 139 aa15.42■□□□□ 0.06
SNCB-204ENST00000508006 GAGE4Q13068 117 aa15.42■□□□□ 0.06
SNCB-204ENST00000508006 GAGE5Q13069 117 aa15.42■□□□□ 0.06
SNCB-204ENST00000508006 GAGE13Q4V321 117 aa15.42■□□□□ 0.06
SNCB-204ENST00000508006 SREK1IP1Q8N9Q2 155 aaPredicted RBP15.42■□□□□ 0.06
SNCB-204ENST00000508006 NEXN-AS1Q8NBZ9 246 aa15.42■□□□□ 0.06
SNCB-204ENST00000508006 ZNRF2Q8NHG8 242 aa15.42■□□□□ 0.06
SNCB-204ENST00000508006 MRAP2Q96G30 205 aa15.42■□□□□ 0.06
SNCB-204ENST00000508006 NIT2Q9NQR4 276 aa15.42■□□□□ 0.06
SNCB-204ENST00000508006 FAM104BQ5XKR9 115 aa15.41■□□□□ 0.06
SNCB-204ENST00000508006 UPK3BQ9BT76 320 aa15.41■□□□□ 0.06
SNCB-204ENST00000508006 GTSF1LQ9H1H1 148 aa15.41■□□□□ 0.06
SNCB-204ENST00000508006 Q9UF83 564 aa15.41■□□□□ 0.06
SNCB-204ENST00000508006 MRPS16Q9Y3D3 137 aaKnown RBP15.41■□□□□ 0.06
SNCB-204ENST00000508006 LINC00588Q9Y4M8 146 aa15.41■□□□□ 0.06
SNCB-204ENST00000508006 UBE2D3P61077 147 aa15.4■□□□□ 0.06
SNCB-204ENST00000508006 UBE2D2P62837 147 aa15.4■□□□□ 0.06
SNCB-204ENST00000508006 AMN1Q8IY45 258 aa15.4■□□□□ 0.06
SNCB-204ENST00000508006 RNF185Q96GF1 192 aa15.4■□□□□ 0.06
SNCB-204ENST00000508006 TNFRSF18Q9Y5U5 241 aa15.4■□□□□ 0.06
SNCB-204ENST00000508006 RYR1P21817 5038 aa15.39■□□□□ 0.05
SNCB-204ENST00000508006 PPP1R17O96001 155 aa15.38■□□□□ 0.05
SNCB-204ENST00000508006 DAZ4Q86SG3 579 aaKnown RBP15.38■□□□□ 0.05
SNCB-204ENST00000508006 DAZ3Q9NR90 486 aaKnown RBP15.38■□□□□ 0.05
SNCB-204ENST00000508006 COX19Q49B96 90 aa15.37■□□□□ 0.05
SNCB-204ENST00000508006 TRAV26-2A0A0B4J265 109 aa15.36■□□□□ 0.05
SNCB-204ENST00000508006 PRSS29PA6NIE9 313 aa15.36■□□□□ 0.05
SNCB-204ENST00000508006 TMEM97Q5BJF2 176 aa15.36■□□□□ 0.05
SNCB-204ENST00000508006 URGCP-MRPS24S4R325 110 aa15.36■□□□□ 0.05
SNCB-204ENST00000508006 TRBV6-5A0A0K0K1A5 114 aa15.35■□□□□ 0.05
SNCB-204ENST00000508006 PPBPP02775 128 aa15.35■□□□□ 0.05
SNCB-204ENST00000508006 MRPL51Q4U2R6 128 aaKnown RBP15.35■□□□□ 0.05
SNCB-204ENST00000508006 LELP1Q5T871 98 aa15.35■□□□□ 0.05
SNCB-204ENST00000508006 M0R2N4 97 aa15.34■□□□□ 0.05
SNCB-204ENST00000508006 A0A1B0GVY2 172 aa15.33■□□□□ 0.04
SNCB-204ENST00000508006 TRAV8-6A0A0B4J262 113 aa15.32■□□□□ 0.04
SNCB-204ENST00000508006 OR10J3Q5JRS4 329 aa15.32■□□□□ 0.04
SNCB-204ENST00000508006 CKS2P33552 79 aa15.31■□□□□ 0.04
SNCB-204ENST00000508006 ATRAIDQ6UW56 229 aa15.31■□□□□ 0.04
SNCB-204ENST00000508006 RPL39LQ96EH5 51 aaKnown RBP15.31■□□□□ 0.04
SNCB-204ENST00000508006 GNB1LQ9BYB4 327 aa15.31■□□□□ 0.04
SNCB-204ENST00000508006 Q9H8V8 135 aa15.31■□□□□ 0.04
SNCB-204ENST00000508006 TRBV24-1A0A075B6N3 115 aa15.3■□□□□ 0.04
SNCB-204ENST00000508006 HLA-DQA1P01909 254 aa15.3■□□□□ 0.04
SNCB-204ENST00000508006 ELOBQ15370 118 aa15.3■□□□□ 0.04
SNCB-204ENST00000508006 TMEM136Q6ZRR5 245 aa15.3■□□□□ 0.04
SNCB-204ENST00000508006 ST20Q9HBF5 79 aa15.3■□□□□ 0.04
SNCB-204ENST00000508006 K7EP13 123 aa15.29■□□□□ 0.04
SNCB-204ENST00000508006 PHOX2AO14813 284 aa15.29■□□□□ 0.04
SNCB-204ENST00000508006 SIVA1O15304 175 aa15.29■□□□□ 0.04
SNCB-204ENST00000508006 MT-ND6P03923 174 aa15.29■□□□□ 0.04
SNCB-204ENST00000508006 SMCO4Q9NRQ5 59 aa15.29■□□□□ 0.04
SNCB-204ENST00000508006 PKHD1P08F94 4074 aa15.28■□□□□ 0.04
SNCB-204ENST00000508006 TRBV6-8A0A0A6YYG3 113 aa15.28■□□□□ 0.04
SNCB-204ENST00000508006 SDHAF1A6NFY7 115 aa15.28■□□□□ 0.04
SNCB-204ENST00000508006 RTL8CO15255 209 aa15.28■□□□□ 0.04
SNCB-204ENST00000508006 ORMDL3Q8N138 153 aa15.28■□□□□ 0.04
SNCB-204ENST00000508006 NRACQ8N912 160 aa15.28■□□□□ 0.04
SNCB-204ENST00000508006 C20orf78Q9BR46 151 aa15.28■□□□□ 0.04
SNCB-204ENST00000508006 LAMTOR2Q9Y2Q5 125 aa15.28■□□□□ 0.04
SNCB-204ENST00000508006 D6R8Y8 96 aa15.27■□□□□ 0.04
SNCB-204ENST00000508006 GAS8-AS1O95177 125 aa15.27■□□□□ 0.04
SNCB-204ENST00000508006 RPS10P46783 165 aaKnown RBP15.27■□□□□ 0.04
SNCB-204ENST00000508006 IGHV3-38A0A0C4DH36 116 aa15.26■□□□□ 0.03
SNCB-204ENST00000508006 NCR2O95944 276 aa15.26■□□□□ 0.03
SNCB-204ENST00000508006 POLR2KP53803 58 aaKnown RBP15.26■□□□□ 0.03
SNCB-204ENST00000508006 RPL32P62910 135 aaKnown RBP15.26■□□□□ 0.03
SNCB-204ENST00000508006 FAT2Q9NYQ8 4349 aa15.26■□□□□ 0.03
SNCB-204ENST00000508006 DNAH2Q9P225 4427 aa15.25■□□□□ 0.03
SNCB-204ENST00000508006 TRBV27A0A0K0K1C4 114 aa15.25■□□□□ 0.03
SNCB-204ENST00000508006 SMKR1H3BMG3 65 aa15.25■□□□□ 0.03
SNCB-204ENST00000508006 I3L3M4 83 aa15.25■□□□□ 0.03
SNCB-204ENST00000508006 DNAH10OSP0CZ25 163 aa15.25■□□□□ 0.03
SNCB-204ENST00000508006 SUMO2P61956 95 aaKnown RBP15.25■□□□□ 0.03
SNCB-204ENST00000508006 COTL1Q14019 142 aa15.25■□□□□ 0.03
SNCB-204ENST00000508006 TMEM70Q9BUB7 260 aa15.25■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms