RNA–Protein interactions for RNA: ENST00000507906.5

USP53-204, Transcript of ubiquitin specific peptidase 53, humanhuman

TSL 4

Gene USP53, Length 546 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-204ENST00000507906 ARL11Q969Q4 196 aa1.27□□□□□ -2.21
USP53-204ENST00000507906 SNRNP25Q9BV90 132 aaKnown RBP1.27□□□□□ -2.21
USP53-204ENST00000507906 FXYD6Q9H0Q3 95 aa1.27□□□□□ -2.21
USP53-204ENST00000507906 CBLN4Q9NTU7 201 aa1.27□□□□□ -2.21
USP53-204ENST00000507906 COMMD3Q9UBI1 195 aa1.27□□□□□ -2.21
USP53-204ENST00000507906 TNFSF18Q9UNG2 199 aa1.27□□□□□ -2.21
USP53-204ENST00000507906 DNAJC15Q9Y5T4 150 aa1.27□□□□□ -2.21
USP53-204ENST00000507906 MUC6Q6W4X9 2439 aa1.27□□□□□ -2.21
USP53-204ENST00000507906 CACNA1CQ13936 2221 aa1.27□□□□□ -2.21
USP53-204ENST00000507906 TANC2Q9HCD6 1990 aa1.27□□□□□ -2.21
USP53-204ENST00000507906 TRBV6-7A0A0A0MS04 114 aa1.26□□□□□ -2.21
USP53-204ENST00000507906 IGHV1-58A0A0C4DH39 117 aa1.26□□□□□ -2.21
USP53-204ENST00000507906 TRBV6-4A0A1B0GX49 114 aa1.26□□□□□ -2.21
USP53-204ENST00000507906 M0R2N4 97 aa1.26□□□□□ -2.21
USP53-204ENST00000507906 INE1O15225 51 aa1.26□□□□□ -2.21
USP53-204ENST00000507906 NDUFB6O95139 128 aa1.26□□□□□ -2.21
USP53-204ENST00000507906 SFTA3P0C7M3 94 aa1.26□□□□□ -2.21
USP53-204ENST00000507906 LINC00032P0C843 101 aa1.26□□□□□ -2.21
USP53-204ENST00000507906 FABP4P15090 132 aa1.26□□□□□ -2.21
USP53-204ENST00000507906 NCBP2-AS2Q69YL0 99 aa1.26□□□□□ -2.21
USP53-204ENST00000507906 GKN2Q86XP6 184 aa1.26□□□□□ -2.21
USP53-204ENST00000507906 ACBD7Q8N6N7 88 aa1.26□□□□□ -2.21
USP53-204ENST00000507906 OR4S1Q8NGB4 309 aa1.26□□□□□ -2.21
USP53-204ENST00000507906 SMIM4Q8WVI0 70 aa1.26□□□□□ -2.21
USP53-204ENST00000507906 TP53RKQ96S44 253 aa1.26□□□□□ -2.21
USP53-204ENST00000507906 S100A13Q99584 98 aa1.26□□□□□ -2.21
USP53-204ENST00000507906 TPT1P8Q9HAU6 139 aa1.26□□□□□ -2.21
USP53-204ENST00000507906 GSKIPQ9P0R6 139 aa1.26□□□□□ -2.21
USP53-204ENST00000507906 GNG8Q9UK08 70 aa1.26□□□□□ -2.21
USP53-204ENST00000507906 LAMTOR2Q9Y2Q5 125 aa1.26□□□□□ -2.21
USP53-204ENST00000507906 SNURFQ9Y675 71 aa1.26□□□□□ -2.21
USP53-204ENST00000507906 V9GYS6 101 aa1.26□□□□□ -2.21
USP53-204ENST00000507906 MYO7AQ13402 2215 aa1.25□□□□□ -2.21
USP53-204ENST00000507906 DIDO1Q9BTC0 2240 aaKnown RBP1.25□□□□□ -2.21
USP53-204ENST00000507906 TRAV30A0A087WSZ9 112 aa1.25□□□□□ -2.21
USP53-204ENST00000507906 A0A087WWC5 75 aa1.25□□□□□ -2.21
USP53-204ENST00000507906 LOC107984640A0A0U1RRK4 108 aa1.25□□□□□ -2.21
USP53-204ENST00000507906 KANTRA0A1W2PQU2 76 aa1.25□□□□□ -2.21
USP53-204ENST00000507906 NAP1L6A6NFF2 107 aa1.25□□□□□ -2.21
USP53-204ENST00000507906 A6NIN4 97 aa1.25□□□□□ -2.21
USP53-204ENST00000507906 F6UZH7 168 aa1.25□□□□□ -2.21
USP53-204ENST00000507906 YPEL1O60688 119 aa1.25□□□□□ -2.21
USP53-204ENST00000507906 CXCL8P10145 99 aa1.25□□□□□ -2.21
USP53-204ENST00000507906 SCGB1A1P11684 91 aa1.25□□□□□ -2.21
USP53-204ENST00000507906 SNCAP37840 140 aa1.25□□□□□ -2.21
USP53-204ENST00000507906 INSL4Q14641 139 aa1.25□□□□□ -2.21
USP53-204ENST00000507906 HMGN3Q15651 99 aa1.25□□□□□ -2.21
USP53-204ENST00000507906 SMIM21Q3B7S5 101 aa1.25□□□□□ -2.21
USP53-204ENST00000507906 TDRG1Q3Y452 100 aa1.25□□□□□ -2.21
USP53-204ENST00000507906 CCSMST1Q4G0I0 132 aa1.25□□□□□ -2.21
USP53-204ENST00000507906 MORN2Q502X0 79 aa1.25□□□□□ -2.21
USP53-204ENST00000507906 OCIAD2Q56VL3 154 aa1.25□□□□□ -2.21
USP53-204ENST00000507906 COL5A1-AS1Q5SY13 56 aa1.25□□□□□ -2.21
USP53-204ENST00000507906 OR2T2Q6IF00 324 aa1.25□□□□□ -2.21
USP53-204ENST00000507906 SLC25A26Q70HW3 274 aa1.25□□□□□ -2.21
USP53-204ENST00000507906 TOMM5Q8N4H5 51 aa1.25□□□□□ -2.21
USP53-204ENST00000507906 CCL4L1Q8NHW4 92 aa1.25□□□□□ -2.21
USP53-204ENST00000507906 PSMF1Q92530 271 aa1.25□□□□□ -2.21
USP53-204ENST00000507906 SPAG17Q6Q759 2223 aa1.25□□□□□ -2.21
USP53-204ENST00000507906 TRAV27A0A087WT01 109 aa1.24□□□□□ -2.21
USP53-204ENST00000507906 TRAV1-2A0A0B4J238 106 aa1.24□□□□□ -2.21
USP53-204ENST00000507906 A0A1B0GW64 132 aa1.24□□□□□ -2.21
USP53-204ENST00000507906 C20orf202A1L168 122 aa1.24□□□□□ -2.21
USP53-204ENST00000507906 ZNF727A8MUV8 499 aa1.24□□□□□ -2.21
USP53-204ENST00000507906 TNFSF15O95150 251 aa1.24□□□□□ -2.21
USP53-204ENST00000507906 DNAL4O96015 105 aa1.24□□□□□ -2.21
USP53-204ENST00000507906 TPT1P13693 172 aaKnown RBP1.24□□□□□ -2.21
USP53-204ENST00000507906 S100A3P33764 101 aa1.24□□□□□ -2.21
USP53-204ENST00000507906 MPV17LQ2QL34 196 aa1.24□□□□□ -2.21
USP53-204ENST00000507906 Q5XG85 94 aa1.24□□□□□ -2.21
USP53-204ENST00000507906 UNQ5815/PRO19632Q6UWF5 114 aa1.24□□□□□ -2.21
USP53-204ENST00000507906 C2orf82Q6UX34 121 aa1.24□□□□□ -2.21
USP53-204ENST00000507906 LINC00305Q7Z4B0 112 aa1.24□□□□□ -2.21
USP53-204ENST00000507906 OR5AS1Q8N127 324 aa1.24□□□□□ -2.21
USP53-204ENST00000507906 FAM19A2Q8N3H0 131 aa1.24□□□□□ -2.21
USP53-204ENST00000507906 OR5AK2Q8NH90 309 aa1.24□□□□□ -2.21
USP53-204ENST00000507906 TSLPQ969D9 159 aa1.24□□□□□ -2.21
USP53-204ENST00000507906 VPS25Q9BRG1 176 aa1.24□□□□□ -2.21
USP53-204ENST00000507906 DPY30Q9C005 99 aa1.24□□□□□ -2.21
USP53-204ENST00000507906 ATG5Q9H1Y0 275 aa1.24□□□□□ -2.21
USP53-204ENST00000507906 ABRACLQ9P1F3 81 aa1.24□□□□□ -2.21
USP53-204ENST00000507906 CACNA1BQ00975 2339 aa1.24□□□□□ -2.21
USP53-204ENST00000507906 HEATR1Q9H583 2144 aaKnown RBP1.24□□□□□ -2.21
USP53-204ENST00000507906 ALPK2Q86TB3 2170 aa1.23□□□□□ -2.21
USP53-204ENST00000507906 TRBV7-6A0A0J9YX20 115 aa1.23□□□□□ -2.21
USP53-204ENST00000507906 IGLC7A0M8Q6 106 aa1.23□□□□□ -2.21
USP53-204ENST00000507906 UMAD1C9J7I0 102 aa1.23□□□□□ -2.21
USP53-204ENST00000507906 CORTO00230 105 aa1.23□□□□□ -2.21
USP53-204ENST00000507906 RPL38P63173 70 aaKnown RBP1.23□□□□□ -2.21
USP53-204ENST00000507906 SELENOWP63302 87 aa1.23□□□□□ -2.21
USP53-204ENST00000507906 IQCJQ1A5X6 159 aa1.23□□□□□ -2.21
USP53-204ENST00000507906 LINC00269Q8N2A0 174 aa1.23□□□□□ -2.21
USP53-204ENST00000507906 PLPP5Q8NEB5 264 aa1.23□□□□□ -2.21
USP53-204ENST00000507906 PPP1R1CQ8WVI7 109 aa1.23□□□□□ -2.21
USP53-204ENST00000507906 AQP10Q96PS8 301 aa1.23□□□□□ -2.21
USP53-204ENST00000507906 AIF1LQ9BQI0 150 aa1.23□□□□□ -2.21
USP53-204ENST00000507906 TCEAL2Q9H3H9 227 aaPredicted RBP1.23□□□□□ -2.21
USP53-204ENST00000507906 RERGLQ9H628 205 aa1.23□□□□□ -2.21
USP53-204ENST00000507906 FKBP11Q9NYL4 201 aa1.23□□□□□ -2.21
USP53-204ENST00000507906 ORMDL1Q9P0S3 153 aa1.23□□□□□ -2.21
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms