RNA–Protein interactions for RNA: ENST00000507650.1

HOXC4-203, Transcript of homeobox C4, humanhuman

TSL 3

Gene HOXC4, Length 575 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC4-203ENST00000507650 SPANXN1Q5VSR9 72 aa10.54□□□□□ -0.72
HOXC4-203ENST00000507650 CHCHD7Q9BUK0 85 aa10.54□□□□□ -0.72
HOXC4-203ENST00000507650 IGKV2D-24A0A075B6R9 120 aa10.53□□□□□ -0.72
HOXC4-203ENST00000507650 C1QBP02746 253 aa10.53□□□□□ -0.72
HOXC4-203ENST00000507650 RAB5CP51148 216 aa10.53□□□□□ -0.72
HOXC4-203ENST00000507650 MEF2BQ02080 365 aaPredicted RBP10.53□□□□□ -0.72
HOXC4-203ENST00000507650 VAX2Q9UIW0 290 aa10.53□□□□□ -0.72
HOXC4-203ENST00000507650 URGCP-MRPS24S4R325 110 aa10.53□□□□□ -0.72
HOXC4-203ENST00000507650 A0A087WX48 190 aa10.52□□□□□ -0.73
HOXC4-203ENST00000507650 Q8N976 141 aa10.52□□□□□ -0.73
HOXC4-203ENST00000507650 M0QY20 66 aa10.51□□□□□ -0.73
HOXC4-203ENST00000507650 BCL2P10415 239 aa10.51□□□□□ -0.73
HOXC4-203ENST00000507650 KRTAP26-1Q6PEX3 210 aa10.51□□□□□ -0.73
HOXC4-203ENST00000507650 Q6ZNX1 250 aa10.51□□□□□ -0.73
HOXC4-203ENST00000507650 C15orf54Q8N8G6 183 aa10.51□□□□□ -0.73
HOXC4-203ENST00000507650 FER1L6-AS1Q8NA97 138 aa10.51□□□□□ -0.73
HOXC4-203ENST00000507650 OR2D3Q8NGH3 330 aa10.51□□□□□ -0.73
HOXC4-203ENST00000507650 AP1S3Q96PC3 154 aa10.51□□□□□ -0.73
HOXC4-203ENST00000507650 F5H697 171 aa10.5□□□□□ -0.73
HOXC4-203ENST00000507650 SUMO4Q6EEV6 95 aa10.5□□□□□ -0.73
HOXC4-203ENST00000507650 TPPP3Q9BW30 176 aa10.5□□□□□ -0.73
HOXC4-203ENST00000507650 K7EN84 100 aa10.49□□□□□ -0.73
HOXC4-203ENST00000507650 GNG4P50150 75 aa10.49□□□□□ -0.73
HOXC4-203ENST00000507650 SLC51BQ86UW2 128 aa10.49□□□□□ -0.73
HOXC4-203ENST00000507650 C9orf62Q8N4C0 152 aa10.49□□□□□ -0.73
HOXC4-203ENST00000507650 RMI2Q96E14 147 aa10.49□□□□□ -0.73
HOXC4-203ENST00000507650 COX11Q9Y6N1 276 aa10.49□□□□□ -0.73
HOXC4-203ENST00000507650 LRP1Q07954 4544 aaKnown RBP10.48□□□□□ -0.73
HOXC4-203ENST00000507650 TMEM262E9PQX1 116 aa10.48□□□□□ -0.73
HOXC4-203ENST00000507650 PDE6DO43924 150 aa10.48□□□□□ -0.73
HOXC4-203ENST00000507650 MGPP08493 103 aa10.48□□□□□ -0.73
HOXC4-203ENST00000507650 KRTAP10-4P60372 401 aaPredicted RBP10.48□□□□□ -0.73
HOXC4-203ENST00000507650 SCXQ7RTU7 201 aa10.48□□□□□ -0.73
HOXC4-203ENST00000507650 SMIM12Q96EX1 92 aa10.48□□□□□ -0.73
HOXC4-203ENST00000507650 MED9Q9NWA0 146 aa10.48□□□□□ -0.73
HOXC4-203ENST00000507650 ANGP03950 147 aaKnown RBP10.47□□□□□ -0.73
HOXC4-203ENST00000507650 RBX1P62877 108 aa10.47□□□□□ -0.73
HOXC4-203ENST00000507650 GAGE6Q13070 117 aa10.47□□□□□ -0.73
HOXC4-203ENST00000507650 ELOBQ15370 118 aa10.47□□□□□ -0.73
HOXC4-203ENST00000507650 EIF5AL1Q6IS14 154 aaKnown RBP10.47□□□□□ -0.73
HOXC4-203ENST00000507650 CLPSL2Q6UWE3 100 aa10.47□□□□□ -0.73
HOXC4-203ENST00000507650 LYZL1Q6UWQ5 148 aa10.47□□□□□ -0.73
HOXC4-203ENST00000507650 CHCHD5Q9BSY4 110 aa10.47□□□□□ -0.73
HOXC4-203ENST00000507650 PRR34Q9NV39 138 aa10.47□□□□□ -0.73
HOXC4-203ENST00000507650 FAM229AH3BQW9 127 aa10.46□□□□□ -0.73
HOXC4-203ENST00000507650 CTRLP40313 264 aa10.46□□□□□ -0.73
HOXC4-203ENST00000507650 RPS20P60866 119 aaKnown RBP10.46□□□□□ -0.73
HOXC4-203ENST00000507650 Q0VG73 95 aa10.46□□□□□ -0.73
HOXC4-203ENST00000507650 IQCJQ1A5X6 159 aa10.46□□□□□ -0.73
HOXC4-203ENST00000507650 NUDT10Q8NFP7 164 aa10.46□□□□□ -0.73
HOXC4-203ENST00000507650 DEFB104AQ8WTQ1 72 aa10.46□□□□□ -0.73
HOXC4-203ENST00000507650 NUDT11Q96G61 164 aa10.46□□□□□ -0.73
HOXC4-203ENST00000507650 PKHD1L1Q86WI1 4243 aa10.45□□□□□ -0.74
HOXC4-203ENST00000507650 P01737 135 aa10.45□□□□□ -0.74
HOXC4-203ENST00000507650 SMIM17P0DL12 118 aa10.45□□□□□ -0.74
HOXC4-203ENST00000507650 CACNG7P62955 275 aa10.45□□□□□ -0.74
HOXC4-203ENST00000507650 LINC00528Q8N1L1 170 aa10.45□□□□□ -0.74
HOXC4-203ENST00000507650 DAZAP1Q96EP5 407 aaKnown RBP10.45□□□□□ -0.74
HOXC4-203ENST00000507650 C1orf43Q9BWL3 253 aa10.45□□□□□ -0.74
HOXC4-203ENST00000507650 GFRA4Q9GZZ7 299 aa10.45□□□□□ -0.74
HOXC4-203ENST00000507650 RNASE7Q9H1E1 156 aaKnown RBP10.45□□□□□ -0.74
HOXC4-203ENST00000507650 TEX46H3BTG2 121 aa10.44□□□□□ -0.74
HOXC4-203ENST00000507650 IFNA1P01562 189 aa10.44□□□□□ -0.74
HOXC4-203ENST00000507650 NTF3P20783 257 aa10.44□□□□□ -0.74
HOXC4-203ENST00000507650 NKX2-5P52952 324 aaPredicted RBP10.44□□□□□ -0.74
HOXC4-203ENST00000507650 LINC00269Q8N2A0 174 aa10.44□□□□□ -0.74
HOXC4-203ENST00000507650 OCC1Q8TAD7 63 aa10.44□□□□□ -0.74
HOXC4-203ENST00000507650 CNFNQ9BYD5 112 aa10.44□□□□□ -0.74
HOXC4-203ENST00000507650 FAT3Q8TDW7 4589 aa10.43□□□□□ -0.74
HOXC4-203ENST00000507650 USP17L23D6RBM5 183 aa10.43□□□□□ -0.74
HOXC4-203ENST00000507650 KCNIP4Q6PIL6 250 aa10.43□□□□□ -0.74
HOXC4-203ENST00000507650 C20orf203Q8NBC4 194 aa10.43□□□□□ -0.74
HOXC4-203ENST00000507650 CIRBP-AS1Q8TBR5 109 aa10.43□□□□□ -0.74
HOXC4-203ENST00000507650 GTSF1Q8WW33 167 aa10.43□□□□□ -0.74
HOXC4-203ENST00000507650 hCG_2014768A0A024R1R8 64 aa10.42□□□□□ -0.74
HOXC4-203ENST00000507650 IGLV4-60A0A075B6I1 120 aa10.42□□□□□ -0.74
HOXC4-203ENST00000507650 TRBV25-1A0A075B6N4 114 aa10.42□□□□□ -0.74
HOXC4-203ENST00000507650 F2Z2F3 143 aa10.42□□□□□ -0.74
HOXC4-203ENST00000507650 HLA-DQA1P01909 254 aa10.42□□□□□ -0.74
HOXC4-203ENST00000507650 CRPP02741 224 aa10.42□□□□□ -0.74
HOXC4-203ENST00000507650 PRSS1P07477 247 aa10.42□□□□□ -0.74
HOXC4-203ENST00000507650 MIAQ16674 131 aa10.42□□□□□ -0.74
HOXC4-203ENST00000507650 RASL11AQ6T310 242 aa10.42□□□□□ -0.74
HOXC4-203ENST00000507650 ALKAL2Q6UX46 152 aa10.42□□□□□ -0.74
HOXC4-203ENST00000507650 CHAC1Q9BUX1 264 aa10.42□□□□□ -0.74
HOXC4-203ENST00000507650 IGHV1-24A0A0C4DH33 117 aa10.41□□□□□ -0.74
HOXC4-203ENST00000507650 FOXA3P55318 350 aaPredicted RBP10.41□□□□□ -0.74
HOXC4-203ENST00000507650 TMEM97Q5BJF2 176 aa10.41□□□□□ -0.74
HOXC4-203ENST00000507650 LYPD6BQ8NI32 183 aa10.41□□□□□ -0.74
HOXC4-203ENST00000507650 DPH3P1Q9H4G8 78 aa10.41□□□□□ -0.74
HOXC4-203ENST00000507650 RPP21Q9H633 154 aaKnown RBP10.41□□□□□ -0.74
HOXC4-203ENST00000507650 TRAV26-2A0A0B4J265 109 aa10.4□□□□□ -0.74
HOXC4-203ENST00000507650 AKAP14Q86UN6 197 aa10.4□□□□□ -0.74
HOXC4-203ENST00000507650 GATD1Q8NB37 220 aa10.4□□□□□ -0.74
HOXC4-203ENST00000507650 XKRY2A2RUG3 117 aa10.39□□□□□ -0.75
HOXC4-203ENST00000507650 H7C1H1 209 aa10.39□□□□□ -0.75
HOXC4-203ENST00000507650 PANO1I0J062 215 aa10.39□□□□□ -0.75
HOXC4-203ENST00000507650 TRGC1P0CF51 173 aa10.39□□□□□ -0.75
HOXC4-203ENST00000507650 WDR73Q6P4I2 378 aa10.39□□□□□ -0.75
HOXC4-203ENST00000507650 NIT2Q9NQR4 276 aa10.39□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms