RNA–Protein interactions for RNA: ENST00000507597.5

USP53-203, Transcript of ubiquitin specific peptidase 53, humanhuman

TSL 3

Gene USP53, Length 503 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-203ENST00000507597 M0QY20 66 aa13.96□□□□□ -0.17
USP53-203ENST00000507597 RAB4AP20338 218 aa13.96□□□□□ -0.17
USP53-203ENST00000507597 SMCO4Q9NRQ5 59 aa13.96□□□□□ -0.17
USP53-203ENST00000507597 NACAE9PAV3 2078 aa13.95□□□□□ -0.18
USP53-203ENST00000507597 PPBPP02775 128 aa13.95□□□□□ -0.18
USP53-203ENST00000507597 TMEM97Q5BJF2 176 aa13.95□□□□□ -0.18
USP53-203ENST00000507597 AMN1Q8IY45 258 aa13.95□□□□□ -0.18
USP53-203ENST00000507597 LOC100131303A0A0U1RQF7 123 aa13.94□□□□□ -0.18
USP53-203ENST00000507597 TIRAPP58753 221 aa13.94□□□□□ -0.18
USP53-203ENST00000507597 DAZ4Q86SG3 579 aaKnown RBP13.94□□□□□ -0.18
USP53-203ENST00000507597 NEXN-AS1Q8NBZ9 246 aa13.94□□□□□ -0.18
USP53-203ENST00000507597 GTSF1LQ9H1H1 148 aa13.94□□□□□ -0.18
USP53-203ENST00000507597 DAZ3Q9NR90 486 aaKnown RBP13.94□□□□□ -0.18
USP53-203ENST00000507597 S100A1P23297 94 aa13.93□□□□□ -0.18
USP53-203ENST00000507597 CKS2P33552 79 aa13.93□□□□□ -0.18
USP53-203ENST00000507597 HLA-DQA1P01909 254 aa13.92□□□□□ -0.18
USP53-203ENST00000507597 LYPD5Q6UWN5 251 aa13.92□□□□□ -0.18
USP53-203ENST00000507597 RNF185Q96GF1 192 aa13.92□□□□□ -0.18
USP53-203ENST00000507597 LY6G6CO95867 125 aa13.91□□□□□ -0.18
USP53-203ENST00000507597 MT-ND6P03923 174 aa13.91□□□□□ -0.18
USP53-203ENST00000507597 UBE2D3P61077 147 aa13.91□□□□□ -0.18
USP53-203ENST00000507597 UBE2D2P62837 147 aa13.91□□□□□ -0.18
USP53-203ENST00000507597 MRPL51Q4U2R6 128 aaKnown RBP13.91□□□□□ -0.18
USP53-203ENST00000507597 OR10J3Q5JRS4 329 aa13.91□□□□□ -0.18
USP53-203ENST00000507597 GNB1LQ9BYB4 327 aa13.91□□□□□ -0.18
USP53-203ENST00000507597 TRBV24-1A0A075B6N3 115 aa13.9□□□□□ -0.18
USP53-203ENST00000507597 ELOBQ15370 118 aa13.9□□□□□ -0.18
USP53-203ENST00000507597 ESRGQ1W209 222 aa13.9□□□□□ -0.18
USP53-203ENST00000507597 TRAV8-6A0A0B4J262 113 aa13.89□□□□□ -0.19
USP53-203ENST00000507597 TRAV26-2A0A0B4J265 109 aa13.89□□□□□ -0.19
USP53-203ENST00000507597 LINC00694P0DN24 101 aa13.89□□□□□ -0.19
USP53-203ENST00000507597 ORMDL3Q8N138 153 aa13.89□□□□□ -0.19
USP53-203ENST00000507597 LINC00476Q8WZB0 136 aa13.89□□□□□ -0.19
USP53-203ENST00000507597 ST20Q9HBF5 79 aa13.89□□□□□ -0.19
USP53-203ENST00000507597 MRPS16Q9Y3D3 137 aaKnown RBP13.89□□□□□ -0.19
USP53-203ENST00000507597 TRBV6-5A0A0K0K1A5 114 aa13.88□□□□□ -0.19
USP53-203ENST00000507597 PHOX2AO14813 284 aa13.88□□□□□ -0.19
USP53-203ENST00000507597 ATRAIDQ6UW56 229 aa13.88□□□□□ -0.19
USP53-203ENST00000507597 LAMTOR2Q9Y2Q5 125 aa13.88□□□□□ -0.19
USP53-203ENST00000507597 LELP1Q5T871 98 aa13.87□□□□□ -0.19
USP53-203ENST00000507597 TMEM136Q6ZRR5 245 aa13.87□□□□□ -0.19
USP53-203ENST00000507597 UPK3BQ9BT76 320 aa13.87□□□□□ -0.19
USP53-203ENST00000507597 LINC00588Q9Y4M8 146 aa13.87□□□□□ -0.19
USP53-203ENST00000507597 APCSP02743 223 aa13.86□□□□□ -0.19
USP53-203ENST00000507597 C20orf78Q9BR46 151 aa13.86□□□□□ -0.19
USP53-203ENST00000507597 CSMD3Q7Z407 3707 aa13.86□□□□□ -0.19
USP53-203ENST00000507597 SDHAF1A6NFY7 115 aa13.85□□□□□ -0.19
USP53-203ENST00000507597 D6R8Y8 96 aa13.85□□□□□ -0.19
USP53-203ENST00000507597 PMCHP20382 165 aa13.85□□□□□ -0.19
USP53-203ENST00000507597 PKIAP61925 76 aa13.85□□□□□ -0.19
USP53-203ENST00000507597 COTL1Q14019 142 aa13.85□□□□□ -0.19
USP53-203ENST00000507597 Q9UF83 564 aa13.85□□□□□ -0.19
USP53-203ENST00000507597 TGIF2-C20orf24A0A0A6YYL0 155 aa13.84□□□□□ -0.19
USP53-203ENST00000507597 LCE6AA0A183 80 aa13.84□□□□□ -0.19
USP53-203ENST00000507597 VCYO14598 125 aa13.84□□□□□ -0.19
USP53-203ENST00000507597 TCAPO15273 167 aa13.84□□□□□ -0.19
USP53-203ENST00000507597 RPL39LQ96EH5 51 aaKnown RBP13.84□□□□□ -0.19
USP53-203ENST00000507597 PRELID3AQ96N28 172 aa13.84□□□□□ -0.19
USP53-203ENST00000507597 I3L3M4 83 aa13.83□□□□□ -0.2
USP53-203ENST00000507597 NCR2O95944 276 aa13.83□□□□□ -0.2
USP53-203ENST00000507597 SUMO2P61956 95 aaKnown RBP13.83□□□□□ -0.2
USP53-203ENST00000507597 DYNC2H1Q8NCM8 4307 aaKnown RBP13.83□□□□□ -0.2
USP53-203ENST00000507597 STARD9Q9P2P6 4700 aa13.82□□□□□ -0.2
USP53-203ENST00000507597 TRBV25-1A0A075B6N4 114 aa13.82□□□□□ -0.2
USP53-203ENST00000507597 TRAV9-2A0A087WT02 112 aa13.82□□□□□ -0.2
USP53-203ENST00000507597 TRBV6-8A0A0A6YYG3 113 aa13.82□□□□□ -0.2
USP53-203ENST00000507597 IGHV3-38A0A0C4DH36 116 aa13.82□□□□□ -0.2
USP53-203ENST00000507597 SMKR1H3BMG3 65 aa13.82□□□□□ -0.2
USP53-203ENST00000507597 SIVA1O15304 175 aa13.82□□□□□ -0.2
USP53-203ENST00000507597 TNFRSF6BO95407 300 aa13.82□□□□□ -0.2
USP53-203ENST00000507597 FABP9Q0Z7S8 132 aa13.82□□□□□ -0.2
USP53-203ENST00000507597 CBLN2Q8IUK8 224 aa13.82□□□□□ -0.2
USP53-203ENST00000507597 KIR2DL4Q99706 377 aa13.82□□□□□ -0.2
USP53-203ENST00000507597 Q9H8V8 135 aa13.82□□□□□ -0.2
USP53-203ENST00000507597 TRAPPC1Q9Y5R8 145 aa13.82□□□□□ -0.2
USP53-203ENST00000507597 IGHV1-24A0A0C4DH33 117 aa13.81□□□□□ -0.2
USP53-203ENST00000507597 K7EP13 123 aa13.81□□□□□ -0.2
USP53-203ENST00000507597 RPL32P62910 135 aaKnown RBP13.81□□□□□ -0.2
USP53-203ENST00000507597 NRACQ8N912 160 aa13.81□□□□□ -0.2
USP53-203ENST00000507597 TMEM70Q9BUB7 260 aa13.81□□□□□ -0.2
USP53-203ENST00000507597 MRPL18Q9H0U6 180 aaKnown RBP13.81□□□□□ -0.2
USP53-203ENST00000507597 TENM2Q9NT68 2774 aa13.81□□□□□ -0.2
USP53-203ENST00000507597 ATP6V1G1O75348 118 aa13.8□□□□□ -0.2
USP53-203ENST00000507597 MAP1LC3AQ9H492 121 aa13.8□□□□□ -0.2
USP53-203ENST00000507597 TRBV27A0A0K0K1C4 114 aa13.79□□□□□ -0.2
USP53-203ENST00000507597 RPS10P46783 165 aaKnown RBP13.79□□□□□ -0.2
USP53-203ENST00000507597 POLR2KP53803 58 aaKnown RBP13.79□□□□□ -0.2
USP53-203ENST00000507597 TTC32Q5I0X7 151 aa13.79□□□□□ -0.2
USP53-203ENST00000507597 FCER1GP30273 86 aa13.78□□□□□ -0.2
USP53-203ENST00000507597 IQCJQ1A5X6 159 aa13.78□□□□□ -0.2
USP53-203ENST00000507597 YPEL4Q96NS1 127 aa13.78□□□□□ -0.2
USP53-203ENST00000507597 UBE2L6O14933 153 aa13.77□□□□□ -0.21
USP53-203ENST00000507597 AMTP48728 403 aa13.77□□□□□ -0.21
USP53-203ENST00000507597 SMAGPQ0VAQ4 97 aa13.77□□□□□ -0.21
USP53-203ENST00000507597 CHCHD5Q9BSY4 110 aa13.77□□□□□ -0.21
USP53-203ENST00000507597 TMEM243Q9BU79 118 aa13.77□□□□□ -0.21
USP53-203ENST00000507597 CHCHD7Q9BUK0 85 aa13.77□□□□□ -0.21
USP53-203ENST00000507597 A0A087WX48 190 aa13.76□□□□□ -0.21
USP53-203ENST00000507597 TMEM262E9PQX1 116 aa13.76□□□□□ -0.21
USP53-203ENST00000507597 GAS8-AS1O95177 125 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 80.5 ms