RNA–Protein interactions for RNA: ENST00000507536.1

PDGFRA-205, Transcript of platelet derived growth factor receptor alpha, humanhuman

TSL 1 (best)

Gene PDGFRA, Length 1,146 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRA-205ENST00000507536 KRTAP26-1Q6PEX3 210 aa6.63□□□□□ -1.35
PDGFRA-205ENST00000507536 OR10G8Q8NGN5 311 aa6.63□□□□□ -1.35
PDGFRA-205ENST00000507536 TRBV7-3A0A075B6L6 115 aa6.62□□□□□ -1.35
PDGFRA-205ENST00000507536 TRBV6-8A0A0A6YYG3 113 aa6.62□□□□□ -1.35
PDGFRA-205ENST00000507536 CTXND1A0A1B0GTU2 59 aa6.62□□□□□ -1.35
PDGFRA-205ENST00000507536 USP17L23D6RBM5 183 aa6.62□□□□□ -1.35
PDGFRA-205ENST00000507536 M0R381 172 aa6.62□□□□□ -1.35
PDGFRA-205ENST00000507536 IFNA7P01567 189 aa6.62□□□□□ -1.35
PDGFRA-205ENST00000507536 PRSS1P07477 247 aa6.62□□□□□ -1.35
PDGFRA-205ENST00000507536 SEC11BP0C7V7 166 aa6.62□□□□□ -1.35
PDGFRA-205ENST00000507536 RPL37AP61513 92 aaKnown RBP6.62□□□□□ -1.35
PDGFRA-205ENST00000507536 Q0VG73 95 aa6.62□□□□□ -1.35
PDGFRA-205ENST00000507536 FAM162BQ5T6X4 162 aa6.62□□□□□ -1.35
PDGFRA-205ENST00000507536 PRR27Q6MZM9 219 aa6.62□□□□□ -1.35
PDGFRA-205ENST00000507536 NEXN-AS1Q8NBZ9 246 aa6.62□□□□□ -1.35
PDGFRA-205ENST00000507536 C1orf43Q9BWL3 253 aa6.62□□□□□ -1.35
PDGFRA-205ENST00000507536 PHLDA3Q9Y5J5 127 aa6.62□□□□□ -1.35
PDGFRA-205ENST00000507536 TMSB15BA0A087X1C1 80 aa6.61□□□□□ -1.35
PDGFRA-205ENST00000507536 LTAP01374 205 aa6.61□□□□□ -1.35
PDGFRA-205ENST00000507536 DEFA1P59665 94 aa6.61□□□□□ -1.35
PDGFRA-205ENST00000507536 DEFA3P59666 94 aa6.61□□□□□ -1.35
PDGFRA-205ENST00000507536 RPL36AP83881 106 aaKnown RBP6.61□□□□□ -1.35
PDGFRA-205ENST00000507536 ELOBQ15370 118 aa6.61□□□□□ -1.35
PDGFRA-205ENST00000507536 NTM-AS1Q6ZSK4 140 aa6.61□□□□□ -1.35
PDGFRA-205ENST00000507536 C15orf54Q8N8G6 183 aa6.61□□□□□ -1.35
PDGFRA-205ENST00000507536 RPL36ALQ969Q0 106 aaKnown RBP6.61□□□□□ -1.35
PDGFRA-205ENST00000507536 HIST1H2BAQ96A08 127 aa6.61□□□□□ -1.35
PDGFRA-205ENST00000507536 ZFP30Q9Y2G7 519 aa6.61□□□□□ -1.35
PDGFRA-205ENST00000507536 TRBV6-1A0A0K0K1D8 114 aa6.6□□□□□ -1.35
PDGFRA-205ENST00000507536 HLA-DQA1P01909 254 aa6.6□□□□□ -1.35
PDGFRA-205ENST00000507536 TPT1P13693 172 aaKnown RBP6.6□□□□□ -1.35
PDGFRA-205ENST00000507536 C14orf177Q52M58 125 aa6.6□□□□□ -1.35
PDGFRA-205ENST00000507536 ZFP82Q8N141 532 aa6.6□□□□□ -1.35
PDGFRA-205ENST00000507536 C9orf163Q8N9P6 203 aa6.6□□□□□ -1.35
PDGFRA-205ENST00000507536 OR10AG1Q8NH19 301 aa6.6□□□□□ -1.35
PDGFRA-205ENST00000507536 FMC1Q96HJ9 113 aa6.6□□□□□ -1.35
PDGFRA-205ENST00000507536 PRR34Q9NV39 138 aa6.6□□□□□ -1.35
PDGFRA-205ENST00000507536 RNF213Q63HN8 5207 aa6.6□□□□□ -1.35
PDGFRA-205ENST00000507536 G3V3Q6 166 aa6.59□□□□□ -1.35
PDGFRA-205ENST00000507536 RAB4BP61018 213 aa6.59□□□□□ -1.35
PDGFRA-205ENST00000507536 RPL19P84098 196 aaKnown RBP6.59□□□□□ -1.35
PDGFRA-205ENST00000507536 NKX6-2Q9C056 277 aaPredicted RBP6.59□□□□□ -1.35
PDGFRA-205ENST00000507536 TMEM262E9PQX1 116 aa6.58□□□□□ -1.36
PDGFRA-205ENST00000507536 PTTG1O95997 202 aa6.58□□□□□ -1.36
PDGFRA-205ENST00000507536 CRPP02741 224 aa6.58□□□□□ -1.36
PDGFRA-205ENST00000507536 ANGP03950 147 aaKnown RBP6.58□□□□□ -1.36
PDGFRA-205ENST00000507536 S100A1P23297 94 aa6.58□□□□□ -1.36
PDGFRA-205ENST00000507536 CIRBPQ14011 172 aaKnown RBP6.58□□□□□ -1.36
PDGFRA-205ENST00000507536 MIAQ16674 131 aa6.58□□□□□ -1.36
PDGFRA-205ENST00000507536 CLPSL2Q6UWE3 100 aa6.58□□□□□ -1.36
PDGFRA-205ENST00000507536 SDIM1Q6ZPB5 146 aa6.58□□□□□ -1.36
PDGFRA-205ENST00000507536 VAX2Q9UIW0 290 aa6.58□□□□□ -1.36
PDGFRA-205ENST00000507536 MAP1LC3B2A6NCE7 125 aa6.57□□□□□ -1.36
PDGFRA-205ENST00000507536 SNAI2O43623 268 aa6.57□□□□□ -1.36
PDGFRA-205ENST00000507536 GIPP09681 153 aaPredicted RBP6.57□□□□□ -1.36
PDGFRA-205ENST00000507536 FHITP49789 147 aa6.57□□□□□ -1.36
PDGFRA-205ENST00000507536 PTTG1IPP53801 180 aa6.57□□□□□ -1.36
PDGFRA-205ENST00000507536 UBE2G1P62253 170 aa6.57□□□□□ -1.36
PDGFRA-205ENST00000507536 ZNF56Q15929 161 aa6.57□□□□□ -1.36
PDGFRA-205ENST00000507536 DGAT2L7PQ6IED9 249 aa6.57□□□□□ -1.36
PDGFRA-205ENST00000507536 KCNIP4Q6PIL6 250 aa6.57□□□□□ -1.36
PDGFRA-205ENST00000507536 MAP1LC3BQ9GZQ8 125 aa6.57□□□□□ -1.36
PDGFRA-205ENST00000507536 CYTL1Q9NRR1 136 aa6.57□□□□□ -1.36
PDGFRA-205ENST00000507536 KIF25-AS1Q9Y6Z4 181 aa6.57□□□□□ -1.36
PDGFRA-205ENST00000507536 MUC21A0A0G2JKD1 596 aa6.56□□□□□ -1.36
PDGFRA-205ENST00000507536 MUC21A0A140T8X8 626 aa6.56□□□□□ -1.36
PDGFRA-205ENST00000507536 CXCL1P09341 107 aa6.56□□□□□ -1.36
PDGFRA-205ENST00000507536 RBX1P62877 108 aa6.56□□□□□ -1.36
PDGFRA-205ENST00000507536 Q6ZNX1 250 aa6.56□□□□□ -1.36
PDGFRA-205ENST00000507536 LINC00269Q8N2A0 174 aa6.56□□□□□ -1.36
PDGFRA-205ENST00000507536 TCEAL7Q9BRU2 100 aa6.56□□□□□ -1.36
PDGFRA-205ENST00000507536 CHCHD5Q9BSY4 110 aa6.56□□□□□ -1.36
PDGFRA-205ENST00000507536 MLST8Q9BVC4 326 aa6.56□□□□□ -1.36
PDGFRA-205ENST00000507536 MED28Q9H204 178 aa6.56□□□□□ -1.36
PDGFRA-205ENST00000507536 hCG_2014768A0A024R1R8 64 aa6.55□□□□□ -1.36
PDGFRA-205ENST00000507536 FXYD6-FXYD2A0A087WZ82 144 aa6.55□□□□□ -1.36
PDGFRA-205ENST00000507536 BORCS7-ASMTA0A0B4J1R7 106 aa6.55□□□□□ -1.36
PDGFRA-205ENST00000507536 OR5AL1P0C617 328 aa6.55□□□□□ -1.36
PDGFRA-205ENST00000507536 AKR1C3P42330 323 aa6.55□□□□□ -1.36
PDGFRA-205ENST00000507536 CNBPP62633 177 aaKnown RBP6.55□□□□□ -1.36
PDGFRA-205ENST00000507536 NDUFA5Q16718 116 aa6.55□□□□□ -1.36
PDGFRA-205ENST00000507536 AKR1C8PQ5T2L2 129 aa6.55□□□□□ -1.36
PDGFRA-205ENST00000507536 INO80EQ8NBZ0 244 aaPredicted RBP6.55□□□□□ -1.36
PDGFRA-205ENST00000507536 GAGE6Q13070 117 aa6.54□□□□□ -1.36
PDGFRA-205ENST00000507536 IQCJQ1A5X6 159 aa6.54□□□□□ -1.36
PDGFRA-205ENST00000507536 CST9LP1Q5W188 147 aa6.54□□□□□ -1.36
PDGFRA-205ENST00000507536 Q6ZRU5 148 aa6.54□□□□□ -1.36
PDGFRA-205ENST00000507536 ZNF471Q9BX82 626 aaPredicted RBP6.54□□□□□ -1.36
PDGFRA-205ENST00000507536 GFRA4Q9GZZ7 299 aa6.54□□□□□ -1.36
PDGFRA-205ENST00000507536 IGLV10-54A0A075B6I4 117 aa6.53□□□□□ -1.36
PDGFRA-205ENST00000507536 PAGE4O60829 102 aa6.53□□□□□ -1.36
PDGFRA-205ENST00000507536 CHTF8P0CG12 524 aa6.53□□□□□ -1.36
PDGFRA-205ENST00000507536 PKIAP61925 76 aa6.53□□□□□ -1.36
PDGFRA-205ENST00000507536 CT83Q5H943 113 aa6.53□□□□□ -1.36
PDGFRA-205ENST00000507536 C20orf203Q8NBC4 194 aa6.53□□□□□ -1.36
PDGFRA-205ENST00000507536 DERL1Q9BUN8 251 aa6.53□□□□□ -1.36
PDGFRA-205ENST00000507536 TRBV25-1A0A075B6N4 114 aa6.52□□□□□ -1.37
PDGFRA-205ENST00000507536 M0QY20 66 aa6.52□□□□□ -1.37
PDGFRA-205ENST00000507536 REG3AQ06141 175 aa6.52□□□□□ -1.37
PDGFRA-205ENST00000507536 CLRN3Q8NCR9 226 aa6.52□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 58.8 ms