RNA–Protein interactions for RNA: ENST00000507075.1

ARRDC3-204, Transcript of arrestin domain containing 3, humanhuman

TSL 2

Gene ARRDC3, Length 355 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARRDC3-204ENST00000507075 USP9YO00507 2555 aaPredicted RBP-0.59□□□□□ -2.5
ARRDC3-204ENST00000507075 CHD8Q9HCK8 2581 aa-0.59□□□□□ -2.5
ARRDC3-204ENST00000507075 TRAV2A0A0B4J234 112 aa-0.59□□□□□ -2.5
ARRDC3-204ENST00000507075 TRBV7-6A0A0J9YX20 115 aa-0.59□□□□□ -2.5
ARRDC3-204ENST00000507075 PNMA8CA0A1B0GUJ8 204 aa-0.59□□□□□ -2.5
ARRDC3-204ENST00000507075 CLPSL1A2RUU4 121 aa-0.59□□□□□ -2.5
ARRDC3-204ENST00000507075 J3KT08 172 aa-0.59□□□□□ -2.5
ARRDC3-204ENST00000507075 SPINK4O60575 86 aa-0.59□□□□□ -2.5
ARRDC3-204ENST00000507075 SLC25A5P05141 298 aaKnown RBP-0.59□□□□□ -2.5
ARRDC3-204ENST00000507075 S100A6P06703 90 aa-0.59□□□□□ -2.5
ARRDC3-204ENST00000507075 CDKN2CP42773 168 aa-0.59□□□□□ -2.5
ARRDC3-204ENST00000507075 SRP9P49458 86 aaKnown RBP-0.59□□□□□ -2.5
ARRDC3-204ENST00000507075 PLGLB1Q02325 96 aa-0.59□□□□□ -2.5
ARRDC3-204ENST00000507075 SPCS2Q15005 226 aa-0.59□□□□□ -2.5
ARRDC3-204ENST00000507075 PIGYQ3MUY2 71 aa-0.59□□□□□ -2.5
ARRDC3-204ENST00000507075 HSD17B12Q53GQ0 312 aa-0.59□□□□□ -2.5
ARRDC3-204ENST00000507075 PTRHD1Q6GMV3 140 aaKnown RBP-0.59□□□□□ -2.5
ARRDC3-204ENST00000507075 HRCT1Q6UXD1 115 aa-0.59□□□□□ -2.5
ARRDC3-204ENST00000507075 DEFB105AQ8NG35 78 aa-0.59□□□□□ -2.5
ARRDC3-204ENST00000507075 PPP1R14BQ96C90 147 aa-0.59□□□□□ -2.5
ARRDC3-204ENST00000507075 LXNQ9BS40 222 aa-0.59□□□□□ -2.5
ARRDC3-204ENST00000507075 SLC35B3Q9H1N7 401 aa-0.59□□□□□ -2.5
ARRDC3-204ENST00000507075 CBLN4Q9NTU7 201 aa-0.59□□□□□ -2.5
ARRDC3-204ENST00000507075 MED11Q9P086 117 aa-0.59□□□□□ -2.5
ARRDC3-204ENST00000507075 METTL1Q9UBP6 276 aaKnown RBP-0.59□□□□□ -2.5
ARRDC3-204ENST00000507075 ERG28Q9UKR5 140 aa-0.59□□□□□ -2.5
ARRDC3-204ENST00000507075 ARL2BPQ9Y2Y0 163 aa-0.59□□□□□ -2.5
ARRDC3-204ENST00000507075 PKHD1L1Q86WI1 4243 aa-0.59□□□□□ -2.5
ARRDC3-204ENST00000507075 BTAF1O14981 1849 aa-0.59□□□□□ -2.5
ARRDC3-204ENST00000507075 PATJQ8NI35 1801 aa-0.59□□□□□ -2.5
ARRDC3-204ENST00000507075 ANKHD1Q8IWZ3 2542 aaKnown RBP-0.6□□□□□ -2.5
ARRDC3-204ENST00000507075 MYH6P13533 1939 aa-0.6□□□□□ -2.5
ARRDC3-204ENST00000507075 PAPPA2Q9BXP8 1791 aa-0.6□□□□□ -2.5
ARRDC3-204ENST00000507075 KIAA0556O60303 1618 aa-0.6□□□□□ -2.5
ARRDC3-204ENST00000507075 A2MP01023 1474 aa-0.6□□□□□ -2.5
ARRDC3-204ENST00000507075 SYNMO15061 1565 aa-0.6□□□□□ -2.51
ARRDC3-204ENST00000507075 CASKIN1Q8WXD9 1431 aa-0.6□□□□□ -2.51
ARRDC3-204ENST00000507075 PGRMC1O00264 195 aaKnown RBP-0.6□□□□□ -2.51
ARRDC3-204ENST00000507075 UQCRQO14949 82 aa-0.6□□□□□ -2.51
ARRDC3-204ENST00000507075 TNFP01375 233 aa-0.6□□□□□ -2.51
ARRDC3-204ENST00000507075 IFNA1P01562 189 aa-0.6□□□□□ -2.51
ARRDC3-204ENST00000507075 TCRAP04437 139 aa-0.6□□□□□ -2.51
ARRDC3-204ENST00000507075 S100A3P33764 101 aa-0.6□□□□□ -2.51
ARRDC3-204ENST00000507075 LSM3P62310 102 aaKnown RBP-0.6□□□□□ -2.51
ARRDC3-204ENST00000507075 GNG3P63215 75 aa-0.6□□□□□ -2.51
ARRDC3-204ENST00000507075 MRPS15P82914 257 aaKnown RBP-0.6□□□□□ -2.51
ARRDC3-204ENST00000507075 DEFB112Q30KQ8 113 aa-0.6□□□□□ -2.51
ARRDC3-204ENST00000507075 DHRS4L2Q6PKH6 230 aa-0.6□□□□□ -2.51
ARRDC3-204ENST00000507075 SNX29P2Q8IUI4 249 aa-0.6□□□□□ -2.51
ARRDC3-204ENST00000507075 SMIM20Q8N5G0 67 aa-0.6□□□□□ -2.51
ARRDC3-204ENST00000507075 OR13C6PQ8NH95 151 aa-0.6□□□□□ -2.51
ARRDC3-204ENST00000507075 DYNLRB2Q8TF09 96 aa-0.6□□□□□ -2.51
ARRDC3-204ENST00000507075 DYDC1Q8WWB3 177 aa-0.6□□□□□ -2.51
ARRDC3-204ENST00000507075 AGPAT4-IT1Q9H0P7 198 aa-0.6□□□□□ -2.51
ARRDC3-204ENST00000507075 LINC00472Q9H8W2 130 aa-0.6□□□□□ -2.51
ARRDC3-204ENST00000507075 NOP16Q9Y3C1 178 aaKnown RBP-0.6□□□□□ -2.51
ARRDC3-204ENST00000507075 UFC1Q9Y3C8 167 aa-0.6□□□□□ -2.51
ARRDC3-204ENST00000507075 VPS13DQ5THJ4 4388 aa-0.6□□□□□ -2.51
ARRDC3-204ENST00000507075 SPEF2Q9C093 1822 aa-0.6□□□□□ -2.51
ARRDC3-204ENST00000507075 COL4A6Q14031 1691 aa-0.6□□□□□ -2.51
ARRDC3-204ENST00000507075 UHRF1BP1LA0JNW5 1464 aa-0.61□□□□□ -2.51
ARRDC3-204ENST00000507075 GAPVD1Q14C86 1478 aa-0.61□□□□□ -2.51
ARRDC3-204ENST00000507075 ITPR3Q14573 2671 aa-0.61□□□□□ -2.51
ARRDC3-204ENST00000507075 A0A0C4DFX4 3053 aa-0.61□□□□□ -2.51
ARRDC3-204ENST00000507075 NSD3Q9BZ95 1437 aa-0.61□□□□□ -2.51
ARRDC3-204ENST00000507075 YTHDC2Q9H6S0 1430 aaKnown RBP-0.61□□□□□ -2.51
ARRDC3-204ENST00000507075 FAM92AA1XBS5 289 aa-0.61□□□□□ -2.51
ARRDC3-204ENST00000507075 CCDC179H3BU77 68 aa-0.61□□□□□ -2.51
ARRDC3-204ENST00000507075 CTXN2P0C2S0 81 aa-0.61□□□□□ -2.51
ARRDC3-204ENST00000507075 HIST1H1BP16401 226 aaKnown RBP-0.61□□□□□ -2.51
ARRDC3-204ENST00000507075 RPL22P35268 128 aaKnown RBP-0.61□□□□□ -2.51
ARRDC3-204ENST00000507075 UBE2D1P51668 147 aa-0.61□□□□□ -2.51
ARRDC3-204ENST00000507075 C9orf116Q5BN46 136 aaPredicted RBP-0.61□□□□□ -2.51
ARRDC3-204ENST00000507075 TMEM91Q6ZNR0 172 aa-0.61□□□□□ -2.51
ARRDC3-204ENST00000507075 BAGE3Q86Y29 109 aa-0.61□□□□□ -2.51
ARRDC3-204ENST00000507075 FAM24BQ8N5W8 94 aa-0.61□□□□□ -2.51
ARRDC3-204ENST00000507075 DEFB123Q8N688 67 aa-0.61□□□□□ -2.51
ARRDC3-204ENST00000507075 ATP6V0E2Q8NHE4 81 aa-0.61□□□□□ -2.51
ARRDC3-204ENST00000507075 C10orf82Q8WW14 230 aa-0.61□□□□□ -2.51
ARRDC3-204ENST00000507075 TRAPPC2LQ9UL33 140 aa-0.61□□□□□ -2.51
ARRDC3-204ENST00000507075 LAMTOR2Q9Y2Q5 125 aa-0.61□□□□□ -2.51
ARRDC3-204ENST00000507075 MED31Q9Y3C7 131 aa-0.61□□□□□ -2.51
ARRDC3-204ENST00000507075 RNF213Q63HN8 5207 aa-0.61□□□□□ -2.51
ARRDC3-204ENST00000507075 HMGXB3Q12766 1538 aa-0.61□□□□□ -2.51
ARRDC3-204ENST00000507075 MED23Q9ULK4 1368 aa-0.61□□□□□ -2.51
ARRDC3-204ENST00000507075 EPG5Q9HCE0 2579 aa-0.61□□□□□ -2.51
ARRDC3-204ENST00000507075 SONP18583 2426 aaKnown RBP-0.62□□□□□ -2.51
ARRDC3-204ENST00000507075 KALRNO60229 2985 aa-0.62□□□□□ -2.51
ARRDC3-204ENST00000507075 COL14A1Q05707 1796 aaKnown RBP-0.62□□□□□ -2.51
ARRDC3-204ENST00000507075 NIPBLQ6KC79 2804 aaeCLIP-0.62□□□□□ -2.51
ARRDC3-204ENST00000507075 ARHGEF12Q9NZN5 1544 aa-0.62□□□□□ -2.51
ARRDC3-204ENST00000507075 CDK5RAP2Q96SN8 1893 aa-0.62□□□□□ -2.51
ARRDC3-204ENST00000507075 H0YJX3 145 aa-0.62□□□□□ -2.51
ARRDC3-204ENST00000507075 J3QLW9 94 aa-0.62□□□□□ -2.51
ARRDC3-204ENST00000507075 NIPSNAP2O75323 286 aa-0.62□□□□□ -2.51
ARRDC3-204ENST00000507075 PITX3O75364 302 aa-0.62□□□□□ -2.51
ARRDC3-204ENST00000507075 MT1AP04731 61 aa-0.62□□□□□ -2.51
ARRDC3-204ENST00000507075 RPL7P18124 248 aaKnown RBP-0.62□□□□□ -2.51
ARRDC3-204ENST00000507075 HSD11B1P28845 292 aa-0.62□□□□□ -2.51
ARRDC3-204ENST00000507075 POLR2HP52434 150 aaKnown RBP-0.62□□□□□ -2.51
Retrieved 100 of 20,778 RNA–protein pairs in 72 ms