RNA–Protein interactions for RNA: ENST00000506924.1

CLCN3-205, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 4

Gene CLCN3, Length 567 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-205ENST00000506924 PRADC1Q9BSG0 188 aa6.5□□□□□ -1.37
CLCN3-205ENST00000506924 BIN3Q9NQY0 253 aa6.5□□□□□ -1.37
CLCN3-205ENST00000506924 TRBV6-4A0A1B0GX49 114 aa6.49□□□□□ -1.37
CLCN3-205ENST00000506924 SNAI2O43623 268 aa6.49□□□□□ -1.37
CLCN3-205ENST00000506924 CRYGDP07320 174 aa6.49□□□□□ -1.37
CLCN3-205ENST00000506924 CXCL1P09341 107 aa6.49□□□□□ -1.37
CLCN3-205ENST00000506924 OR5AL1P0C617 328 aa6.49□□□□□ -1.37
CLCN3-205ENST00000506924 RPS20P60866 119 aaKnown RBP6.49□□□□□ -1.37
CLCN3-205ENST00000506924 GAGE1Q13065 139 aa6.49□□□□□ -1.37
CLCN3-205ENST00000506924 GAGE4Q13068 117 aa6.49□□□□□ -1.37
CLCN3-205ENST00000506924 GAGE5Q13069 117 aa6.49□□□□□ -1.37
CLCN3-205ENST00000506924 RHOHQ15669 191 aa6.49□□□□□ -1.37
CLCN3-205ENST00000506924 TMEM18Q96B42 140 aa6.49□□□□□ -1.37
CLCN3-205ENST00000506924 URB1-AS1Q96HZ7 61 aa6.49□□□□□ -1.37
CLCN3-205ENST00000506924 RPP21Q9H633 154 aaKnown RBP6.49□□□□□ -1.37
CLCN3-205ENST00000506924 Q9H8V8 135 aa6.49□□□□□ -1.37
CLCN3-205ENST00000506924 MRPS16Q9Y3D3 137 aaKnown RBP6.49□□□□□ -1.37
CLCN3-205ENST00000506924 NBDYA0A0U1RRE5 68 aa6.48□□□□□ -1.37
CLCN3-205ENST00000506924 GATCO43716 136 aaKnown RBP6.48□□□□□ -1.37
CLCN3-205ENST00000506924 CIDEAO60543 219 aa6.48□□□□□ -1.37
CLCN3-205ENST00000506924 NXPH4O95158 308 aa6.48□□□□□ -1.37
CLCN3-205ENST00000506924 IGLC6P0CF74 106 aa6.48□□□□□ -1.37
CLCN3-205ENST00000506924 ERVFC1-1P60608 527 aa6.48□□□□□ -1.37
CLCN3-205ENST00000506924 PEA15Q15121 130 aa6.48□□□□□ -1.37
CLCN3-205ENST00000506924 ZNF56Q15929 161 aa6.48□□□□□ -1.37
CLCN3-205ENST00000506924 SERTAD4-AS1Q5TG53 156 aa6.48□□□□□ -1.37
CLCN3-205ENST00000506924 LYZL1Q6UWQ5 148 aa6.48□□□□□ -1.37
CLCN3-205ENST00000506924 ZFP2Q6ZN57 461 aa6.48□□□□□ -1.37
CLCN3-205ENST00000506924 LINC01551Q86U37 167 aa6.48□□□□□ -1.37
CLCN3-205ENST00000506924 XKRY2A2RUG3 117 aa6.47□□□□□ -1.37
CLCN3-205ENST00000506924 RAB14P61106 215 aa6.47□□□□□ -1.37
CLCN3-205ENST00000506924 IFITM2Q01629 132 aa6.47□□□□□ -1.37
CLCN3-205ENST00000506924 Q6ZR54 194 aa6.47□□□□□ -1.37
CLCN3-205ENST00000506924 WFDC10BQ8IUB3 73 aa6.47□□□□□ -1.37
CLCN3-205ENST00000506924 KRTAP1-5Q9BYS1 174 aa6.47□□□□□ -1.37
CLCN3-205ENST00000506924 MGPP08493 103 aa6.46□□□□□ -1.38
CLCN3-205ENST00000506924 ADIRFQ15847 76 aa6.46□□□□□ -1.38
CLCN3-205ENST00000506924 TMEM241Q24JQ0 296 aa6.46□□□□□ -1.38
CLCN3-205ENST00000506924 ATP6V0E2Q8NHE4 81 aa6.46□□□□□ -1.38
CLCN3-205ENST00000506924 GTSF1Q8WW33 167 aa6.46□□□□□ -1.38
CLCN3-205ENST00000506924 PGLYRP4Q96LB8 373 aa6.46□□□□□ -1.38
CLCN3-205ENST00000506924 UPK3BQ9BT76 320 aa6.46□□□□□ -1.38
CLCN3-205ENST00000506924 LY96Q9Y6Y9 160 aa6.46□□□□□ -1.38
CLCN3-205ENST00000506924 DNAH6Q9C0G6 4158 aa6.46□□□□□ -1.38
CLCN3-205ENST00000506924 RTL8CO15255 209 aa6.45□□□□□ -1.38
CLCN3-205ENST00000506924 SIVA1O15304 175 aa6.45□□□□□ -1.38
CLCN3-205ENST00000506924 SMIM17P0DL12 118 aa6.45□□□□□ -1.38
CLCN3-205ENST00000506924 NTF3P20783 257 aa6.45□□□□□ -1.38
CLCN3-205ENST00000506924 EVI2AP22794 236 aa6.45□□□□□ -1.38
CLCN3-205ENST00000506924 RPL23P62829 140 aaKnown RBP6.45□□□□□ -1.38
CLCN3-205ENST00000506924 CACNG7P62955 275 aa6.45□□□□□ -1.38
CLCN3-205ENST00000506924 FAM231DQ6ZW35 169 aa6.45□□□□□ -1.38
CLCN3-205ENST00000506924 AP1S3Q96PC3 154 aa6.45□□□□□ -1.38
CLCN3-205ENST00000506924 KIF25-AS1Q9Y6Z4 181 aa6.45□□□□□ -1.38
CLCN3-205ENST00000506924 EPPK1P58107 5090 aaKnown RBP6.45□□□□□ -1.38
CLCN3-205ENST00000506924 A0A1W2PPQ1 181 aa6.44□□□□□ -1.38
CLCN3-205ENST00000506924 F2Z2F3 143 aa6.44□□□□□ -1.38
CLCN3-205ENST00000506924 NDUFS6O75380 124 aaKnown RBP6.44□□□□□ -1.38
CLCN3-205ENST00000506924 FOXA3P55318 350 aaPredicted RBP6.44□□□□□ -1.38
CLCN3-205ENST00000506924 RAB4BP61018 213 aa6.44□□□□□ -1.38
CLCN3-205ENST00000506924 FAM74A3Q4VXF1 159 aa6.44□□□□□ -1.38
CLCN3-205ENST00000506924 OR10J3Q5JRS4 329 aa6.44□□□□□ -1.38
CLCN3-205ENST00000506924 SOHLH1Q5JUK2 328 aa6.44□□□□□ -1.38
CLCN3-205ENST00000506924 C1orf134Q5TEV5 83 aa6.44□□□□□ -1.38
CLCN3-205ENST00000506924 SH2D6Q7Z4S9 175 aa6.44□□□□□ -1.38
CLCN3-205ENST00000506924 ISOC2Q96AB3 205 aa6.44□□□□□ -1.38
CLCN3-205ENST00000506924 NAT8Q9UHE5 227 aa6.44□□□□□ -1.38
CLCN3-205ENST00000506924 IGHV3-38A0A0C4DH36 116 aa6.43□□□□□ -1.38
CLCN3-205ENST00000506924 A8MWL6 223 aa6.43□□□□□ -1.38
CLCN3-205ENST00000506924 LINC00694P0DN24 101 aa6.43□□□□□ -1.38
CLCN3-205ENST00000506924 CTRLP40313 264 aa6.43□□□□□ -1.38
CLCN3-205ENST00000506924 LINC00315P59091 139 aa6.43□□□□□ -1.38
CLCN3-205ENST00000506924 CLLU1Q5K131 121 aa6.43□□□□□ -1.38
CLCN3-205ENST00000506924 C6orf223Q8N319 242 aa6.43□□□□□ -1.38
CLCN3-205ENST00000506924 NEXN-AS1Q8NBZ9 246 aa6.43□□□□□ -1.38
CLCN3-205ENST00000506924 GTSF1LQ9H1H1 148 aa6.43□□□□□ -1.38
CLCN3-205ENST00000506924 OSTCQ9NRP0 149 aa6.43□□□□□ -1.38
CLCN3-205ENST00000506924 FRAS1Q86XX4 4008 aa6.43□□□□□ -1.38
CLCN3-205ENST00000506924 TRAV8-6A0A0B4J262 113 aa6.42□□□□□ -1.38
CLCN3-205ENST00000506924 IGHV3-30P01768 117 aa6.42□□□□□ -1.38
CLCN3-205ENST00000506924 IGHV3-33P01772 117 aa6.42□□□□□ -1.38
CLCN3-205ENST00000506924 TRGC1P0CF51 173 aa6.42□□□□□ -1.38
CLCN3-205ENST00000506924 IGHV3-30-3P0DP02 117 aa6.42□□□□□ -1.38
CLCN3-205ENST00000506924 IGHV3-30-5P0DP03 117 aa6.42□□□□□ -1.38
CLCN3-205ENST00000506924 RPL36AP83881 106 aaKnown RBP6.42□□□□□ -1.38
CLCN3-205ENST00000506924 LELP1Q5T871 98 aa6.42□□□□□ -1.38
CLCN3-205ENST00000506924 C15orf54Q8N8G6 183 aa6.42□□□□□ -1.38
CLCN3-205ENST00000506924 OR10G8Q8NGN5 311 aa6.42□□□□□ -1.38
CLCN3-205ENST00000506924 TSKUQ8WUA8 353 aa6.42□□□□□ -1.38
CLCN3-205ENST00000506924 SMDT1Q9H4I9 107 aa6.42□□□□□ -1.38
CLCN3-205ENST00000506924 V9GYV3 84 aa6.42□□□□□ -1.38
CLCN3-205ENST00000506924 DNAH10Q8IVF4 4471 aa6.42□□□□□ -1.38
CLCN3-205ENST00000506924 TRBV7-3A0A075B6L6 115 aa6.41□□□□□ -1.38
CLCN3-205ENST00000506924 TRAV26-2A0A0B4J265 109 aa6.41□□□□□ -1.38
CLCN3-205ENST00000506924 TRBV10-1A0A0K0K1A3 114 aa6.41□□□□□ -1.38
CLCN3-205ENST00000506924 HIGD1CA8MV81 97 aa6.41□□□□□ -1.38
CLCN3-205ENST00000506924 UBE2D3P61077 147 aa6.41□□□□□ -1.38
CLCN3-205ENST00000506924 UBE2D2P62837 147 aa6.41□□□□□ -1.38
CLCN3-205ENST00000506924 TTC32Q5I0X7 151 aa6.41□□□□□ -1.38
CLCN3-205ENST00000506924 WDR73Q6P4I2 378 aa6.41□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms