RNA–Protein interactions for RNA: ENST00000506409.1

MED28-204, Transcript of mediator complex subunit 28, humanhuman

TSL 2

Gene MED28, Length 347 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MED28-204ENST00000506409 TRBV6-8A0A0A6YYG3 113 aa10.4□□□□□ -0.74
MED28-204ENST00000506409 CDK2AP2O75956 126 aa10.4□□□□□ -0.74
MED28-204ENST00000506409 NTF3P20783 257 aa10.4□□□□□ -0.74
MED28-204ENST00000506409 CDPF1Q6NVV7 123 aa10.4□□□□□ -0.74
MED28-204ENST00000506409 SMIM7Q9BQ49 75 aa10.4□□□□□ -0.74
MED28-204ENST00000506409 LRP1BQ9NZR2 4599 aa10.39□□□□□ -0.75
MED28-204ENST00000506409 A0A087WX48 190 aa10.39□□□□□ -0.75
MED28-204ENST00000506409 TRAV8-3A0A0A6YYJ7 113 aa10.39□□□□□ -0.75
MED28-204ENST00000506409 H7C1H1 209 aa10.39□□□□□ -0.75
MED28-204ENST00000506409 NDUFS6O75380 124 aaKnown RBP10.39□□□□□ -0.75
MED28-204ENST00000506409 FUSP35637 526 aaKnown RBP eCLIP10.39□□□□□ -0.75
MED28-204ENST00000506409 WDR73Q6P4I2 378 aa10.39□□□□□ -0.75
MED28-204ENST00000506409 KCNIP4Q6PIL6 250 aa10.39□□□□□ -0.75
MED28-204ENST00000506409 TM2D2Q9BX73 214 aa10.39□□□□□ -0.75
MED28-204ENST00000506409 M0QY20 66 aa10.38□□□□□ -0.75
MED28-204ENST00000506409 GATCO43716 136 aaKnown RBP10.38□□□□□ -0.75
MED28-204ENST00000506409 TWIST1Q15672 202 aa10.38□□□□□ -0.75
MED28-204ENST00000506409 SUMO4Q6EEV6 95 aa10.38□□□□□ -0.75
MED28-204ENST00000506409 FAM231DQ6ZW35 169 aa10.38□□□□□ -0.75
MED28-204ENST00000506409 CHCHD7Q9BUK0 85 aa10.38□□□□□ -0.75
MED28-204ENST00000506409 CNFNQ9BYD5 112 aa10.38□□□□□ -0.75
MED28-204ENST00000506409 DPH3P1Q9H4G8 78 aa10.38□□□□□ -0.75
MED28-204ENST00000506409 LRCOL1A6NCL2 159 aa10.37□□□□□ -0.75
MED28-204ENST00000506409 ZNF727A8MUV8 499 aa10.37□□□□□ -0.75
MED28-204ENST00000506409 TMEM262E9PQX1 116 aa10.37□□□□□ -0.75
MED28-204ENST00000506409 SRP19P09132 144 aaKnown RBP10.37□□□□□ -0.75
MED28-204ENST00000506409 GTSF1Q8WW33 167 aa10.37□□□□□ -0.75
MED28-204ENST00000506409 DNAJC30Q96LL9 226 aa10.37□□□□□ -0.75
MED28-204ENST00000506409 KLK12Q9UKR0 248 aa10.37□□□□□ -0.75
MED28-204ENST00000506409 ELOBQ15370 118 aa10.36□□□□□ -0.75
MED28-204ENST00000506409 TMEM97Q5BJF2 176 aa10.36□□□□□ -0.75
MED28-204ENST00000506409 TEX261Q6UWH6 196 aa10.36□□□□□ -0.75
MED28-204ENST00000506409 LINC01551Q86U37 167 aa10.36□□□□□ -0.75
MED28-204ENST00000506409 A8MWL6 223 aa10.35□□□□□ -0.75
MED28-204ENST00000506409 RASL11AQ6T310 242 aa10.35□□□□□ -0.75
MED28-204ENST00000506409 CHCHD5Q9BSY4 110 aa10.35□□□□□ -0.75
MED28-204ENST00000506409 PKIAP61925 76 aa10.34□□□□□ -0.75
MED28-204ENST00000506409 CT83Q5H943 113 aa10.34□□□□□ -0.75
MED28-204ENST00000506409 NTM-AS1Q6ZSK4 140 aa10.34□□□□□ -0.75
MED28-204ENST00000506409 UBE2WQ96B02 151 aa10.34□□□□□ -0.75
MED28-204ENST00000506409 RMI2Q96E14 147 aa10.34□□□□□ -0.75
MED28-204ENST00000506409 COX11Q9Y6N1 276 aa10.34□□□□□ -0.75
MED28-204ENST00000506409 RYR1P21817 5038 aa10.33□□□□□ -0.76
MED28-204ENST00000506409 TRBV25-1A0A075B6N4 114 aa10.33□□□□□ -0.76
MED28-204ENST00000506409 MPV17L2Q567V2 206 aa10.33□□□□□ -0.76
MED28-204ENST00000506409 SMIM15Q7Z3B0 74 aa10.33□□□□□ -0.76
MED28-204ENST00000506409 Q8N814 137 aa10.33□□□□□ -0.76
MED28-204ENST00000506409 PGLYRP4Q96LB8 373 aa10.33□□□□□ -0.76
MED28-204ENST00000506409 NIT2Q9NQR4 276 aa10.33□□□□□ -0.76
MED28-204ENST00000506409 HSPG2P98160 4391 aa10.33□□□□□ -0.76
MED28-204ENST00000506409 DNAH5Q8TE73 4624 aa10.33□□□□□ -0.76
MED28-204ENST00000506409 IGKV2D-24A0A075B6R9 120 aa10.32□□□□□ -0.76
MED28-204ENST00000506409 IGLV5-52A0A0A0MRZ9 124 aa10.32□□□□□ -0.76
MED28-204ENST00000506409 C15orf54Q8N8G6 183 aa10.32□□□□□ -0.76
MED28-204ENST00000506409 NTN5Q8WTR8 489 aaPredicted RBP10.32□□□□□ -0.76
MED28-204ENST00000506409 OSTCQ9NRP0 149 aa10.32□□□□□ -0.76
MED28-204ENST00000506409 IGHV1-24A0A0C4DH33 117 aa10.31□□□□□ -0.76
MED28-204ENST00000506409 CRPP02741 224 aa10.31□□□□□ -0.76
MED28-204ENST00000506409 ANGP03950 147 aaKnown RBP10.31□□□□□ -0.76
MED28-204ENST00000506409 GCSHP23434 173 aa10.31□□□□□ -0.76
MED28-204ENST00000506409 FOXA3P55318 350 aaPredicted RBP10.31□□□□□ -0.76
MED28-204ENST00000506409 Q0VG73 95 aa10.31□□□□□ -0.76
MED28-204ENST00000506409 IQCJQ1A5X6 159 aa10.31□□□□□ -0.76
MED28-204ENST00000506409 FAM74A3Q4VXF1 159 aa10.31□□□□□ -0.76
MED28-204ENST00000506409 MAPKAPK5-AS1Q8N8E1 139 aa10.31□□□□□ -0.76
MED28-204ENST00000506409 TSKUQ8WUA8 353 aa10.31□□□□□ -0.76
MED28-204ENST00000506409 BORCS7Q96B45 105 aa10.31□□□□□ -0.76
MED28-204ENST00000506409 TRAV26-2A0A0B4J265 109 aa10.3□□□□□ -0.76
MED28-204ENST00000506409 C9JQL5 133 aa10.3□□□□□ -0.76
MED28-204ENST00000506409 LECT2O14960 151 aa10.3□□□□□ -0.76
MED28-204ENST00000506409 KRTAP10-1P60331 282 aa10.3□□□□□ -0.76
MED28-204ENST00000506409 GAGE6Q13070 117 aa10.3□□□□□ -0.76
MED28-204ENST00000506409 WFDC2Q14508 124 aa10.3□□□□□ -0.76
MED28-204ENST00000506409 PEA15Q15121 130 aa10.3□□□□□ -0.76
MED28-204ENST00000506409 TMEM241Q24JQ0 296 aa10.3□□□□□ -0.76
MED28-204ENST00000506409 ATRAIDQ6UW56 229 aa10.3□□□□□ -0.76
MED28-204ENST00000506409 Q8N976 141 aa10.3□□□□□ -0.76
MED28-204ENST00000506409 GATD1Q8NB37 220 aa10.3□□□□□ -0.76
MED28-204ENST00000506409 FRZBQ92765 325 aa10.3□□□□□ -0.76
MED28-204ENST00000506409 GFRA4Q9GZZ7 299 aa10.3□□□□□ -0.76
MED28-204ENST00000506409 APOBP04114 4563 aaKnown RBP10.29□□□□□ -0.76
MED28-204ENST00000506409 HIGD1CA8MV81 97 aa10.29□□□□□ -0.76
MED28-204ENST00000506409 SRSF3P84103 164 aaKnown RBP10.29□□□□□ -0.76
MED28-204ENST00000506409 BAALCQ8WXS3 180 aa10.29□□□□□ -0.76
MED28-204ENST00000506409 FAM231BA6NCW3 169 aa10.28□□□□□ -0.76
MED28-204ENST00000506409 RPL23P62829 140 aaKnown RBP10.28□□□□□ -0.76
MED28-204ENST00000506409 RBX1P62877 108 aa10.28□□□□□ -0.76
MED28-204ENST00000506409 ENHOQ6UWT2 76 aa10.28□□□□□ -0.76
MED28-204ENST00000506409 ISOC2Q96AB3 205 aa10.28□□□□□ -0.76
MED28-204ENST00000506409 TMEM243Q9BU79 118 aa10.28□□□□□ -0.76
MED28-204ENST00000506409 C1orf43Q9BWL3 253 aa10.28□□□□□ -0.76
MED28-204ENST00000506409 SMDT1Q9H4I9 107 aa10.28□□□□□ -0.76
MED28-204ENST00000506409 NAT8Q9UHE5 227 aa10.28□□□□□ -0.76
MED28-204ENST00000506409 A0A1B0GUT8 65 aa10.27□□□□□ -0.77
MED28-204ENST00000506409 COTL1Q14019 142 aa10.27□□□□□ -0.77
MED28-204ENST00000506409 ADIRFQ15847 76 aa10.27□□□□□ -0.77
MED28-204ENST00000506409 DEFB104AQ8WTQ1 72 aa10.27□□□□□ -0.77
MED28-204ENST00000506409 V9GYV3 84 aa10.27□□□□□ -0.77
MED28-204ENST00000506409 MIAQ16674 131 aa10.26□□□□□ -0.77
MED28-204ENST00000506409 RPL39LQ96EH5 51 aaKnown RBP10.26□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 75.8 ms