RNA–Protein interactions for RNA: ENST00000505199.5

SNCA-208, Transcript of synuclein alpha, humanhuman

TSL 1 (best) BASIC

Gene SNCA, Length 411 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-208ENST00000505199 UBE2D2P62837 147 aa8.59□□□□□ -1.03
SNCA-208ENST00000505199 LELP1Q5T871 98 aa8.59□□□□□ -1.03
SNCA-208ENST00000505199 MRAP2Q96G30 205 aa8.59□□□□□ -1.03
SNCA-208ENST00000505199 BTF3L4Q96K17 158 aa8.59□□□□□ -1.03
SNCA-208ENST00000505199 NIT2Q9NQR4 276 aa8.59□□□□□ -1.03
SNCA-208ENST00000505199 SSTP61278 116 aa8.58□□□□□ -1.04
SNCA-208ENST00000505199 TTC32Q5I0X7 151 aa8.58□□□□□ -1.04
SNCA-208ENST00000505199 SUMO4Q6EEV6 95 aa8.58□□□□□ -1.04
SNCA-208ENST00000505199 NEXN-AS1Q8NBZ9 246 aa8.58□□□□□ -1.04
SNCA-208ENST00000505199 CLRN3Q8NCR9 226 aa8.58□□□□□ -1.04
SNCA-208ENST00000505199 TRAV8-6A0A0B4J262 113 aa8.57□□□□□ -1.04
SNCA-208ENST00000505199 TRBV6-5A0A0K0K1A5 114 aa8.57□□□□□ -1.04
SNCA-208ENST00000505199 LOC100131303A0A0U1RQF7 123 aa8.57□□□□□ -1.04
SNCA-208ENST00000505199 PPBPP02775 128 aa8.57□□□□□ -1.04
SNCA-208ENST00000505199 MGPP08493 103 aa8.57□□□□□ -1.04
SNCA-208ENST00000505199 S100PP25815 95 aa8.57□□□□□ -1.04
SNCA-208ENST00000505199 PKIAP61925 76 aa8.57□□□□□ -1.04
SNCA-208ENST00000505199 Q9H8V8 135 aa8.57□□□□□ -1.04
SNCA-208ENST00000505199 TNFRSF18Q9Y5U5 241 aa8.57□□□□□ -1.04
SNCA-208ENST00000505199 C7orf77A4D0Y5 90 aa8.56□□□□□ -1.04
SNCA-208ENST00000505199 GAGE12JA6NER3 117 aa8.56□□□□□ -1.04
SNCA-208ENST00000505199 SIVA1O15304 175 aa8.56□□□□□ -1.04
SNCA-208ENST00000505199 DNAH10OSP0CZ25 163 aa8.56□□□□□ -1.04
SNCA-208ENST00000505199 RAB4AP20338 218 aa8.56□□□□□ -1.04
SNCA-208ENST00000505199 GAGE1Q13065 139 aa8.56□□□□□ -1.04
SNCA-208ENST00000505199 GAGE4Q13068 117 aa8.56□□□□□ -1.04
SNCA-208ENST00000505199 GAGE5Q13069 117 aa8.56□□□□□ -1.04
SNCA-208ENST00000505199 COX19Q49B96 90 aa8.56□□□□□ -1.04
SNCA-208ENST00000505199 GAGE13Q4V321 117 aa8.56□□□□□ -1.04
SNCA-208ENST00000505199 FAM104BQ5XKR9 115 aa8.56□□□□□ -1.04
SNCA-208ENST00000505199 CHCHD7Q9BUK0 85 aa8.56□□□□□ -1.04
SNCA-208ENST00000505199 TRAV9-2A0A087WT02 112 aa8.55□□□□□ -1.04
SNCA-208ENST00000505199 APOC3P02656 99 aa8.55□□□□□ -1.04
SNCA-208ENST00000505199 Q6ZR54 194 aa8.55□□□□□ -1.04
SNCA-208ENST00000505199 C10orf126Q8N4M7 172 aa8.55□□□□□ -1.04
SNCA-208ENST00000505199 PHOX2AO14813 284 aa8.54□□□□□ -1.04
SNCA-208ENST00000505199 CAMPP49913 170 aa8.54□□□□□ -1.04
SNCA-208ENST00000505199 LINC01556Q5JQF7 62 aa8.54□□□□□ -1.04
SNCA-208ENST00000505199 RNF185Q96GF1 192 aa8.54□□□□□ -1.04
SNCA-208ENST00000505199 Q9UF83 564 aa8.54□□□□□ -1.04
SNCA-208ENST00000505199 LAMTOR2Q9Y2Q5 125 aa8.54□□□□□ -1.04
SNCA-208ENST00000505199 KMT2CQ8NEZ4 4911 aaKnown RBP8.54□□□□□ -1.04
SNCA-208ENST00000505199 PLECQ15149 4684 aaKnown RBP8.53□□□□□ -1.04
SNCA-208ENST00000505199 TRBV24-1A0A075B6N3 115 aa8.53□□□□□ -1.04
SNCA-208ENST00000505199 TRBV6-8A0A0A6YYG3 113 aa8.53□□□□□ -1.04
SNCA-208ENST00000505199 IGHV3-38A0A0C4DH36 116 aa8.53□□□□□ -1.04
SNCA-208ENST00000505199 NBDYA0A0U1RRE5 68 aa8.53□□□□□ -1.04
SNCA-208ENST00000505199 NCR2O95944 276 aa8.53□□□□□ -1.04
SNCA-208ENST00000505199 RPL32P62910 135 aaKnown RBP8.53□□□□□ -1.04
SNCA-208ENST00000505199 MRPL54Q6P161 138 aaKnown RBP8.53□□□□□ -1.04
SNCA-208ENST00000505199 AMN1Q8IY45 258 aa8.53□□□□□ -1.04
SNCA-208ENST00000505199 C20orf78Q9BR46 151 aa8.53□□□□□ -1.04
SNCA-208ENST00000505199 RPS10P5Q9NQ39 176 aa8.53□□□□□ -1.04
SNCA-208ENST00000505199 TCAPO15273 167 aa8.52□□□□□ -1.05
SNCA-208ENST00000505199 IQCJQ1A5X6 159 aa8.52□□□□□ -1.05
SNCA-208ENST00000505199 OR10J3Q5JRS4 329 aa8.52□□□□□ -1.05
SNCA-208ENST00000505199 TRBV25-1A0A075B6N4 114 aa8.51□□□□□ -1.05
SNCA-208ENST00000505199 TRBV27A0A0K0K1C4 114 aa8.51□□□□□ -1.05
SNCA-208ENST00000505199 SDHAF1A6NFY7 115 aa8.51□□□□□ -1.05
SNCA-208ENST00000505199 HLA-DQA1P01909 254 aa8.51□□□□□ -1.05
SNCA-208ENST00000505199 MT-ND6P03923 174 aa8.51□□□□□ -1.05
SNCA-208ENST00000505199 LAGE3Q14657 143 aa8.51□□□□□ -1.05
SNCA-208ENST00000505199 MRPL51Q4U2R6 128 aaKnown RBP8.51□□□□□ -1.05
SNCA-208ENST00000505199 GNB1LQ9BYB4 327 aa8.51□□□□□ -1.05
SNCA-208ENST00000505199 ST20Q9HBF5 79 aa8.51□□□□□ -1.05
SNCA-208ENST00000505199 ALMS1Q8TCU4 4167 aa8.51□□□□□ -1.05
SNCA-208ENST00000505199 TRAV26-2A0A0B4J265 109 aa8.5□□□□□ -1.05
SNCA-208ENST00000505199 H7C423 109 aa8.5□□□□□ -1.05
SNCA-208ENST00000505199 I3L3M4 83 aa8.5□□□□□ -1.05
SNCA-208ENST00000505199 CKS2P33552 79 aa8.5□□□□□ -1.05
SNCA-208ENST00000505199 POLR2KP53803 58 aaKnown RBP8.5□□□□□ -1.05
SNCA-208ENST00000505199 ORMDL3Q8N138 153 aa8.5□□□□□ -1.05
SNCA-208ENST00000505199 IGHV1-24A0A0C4DH33 117 aa8.49□□□□□ -1.05
SNCA-208ENST00000505199 VCYO14598 125 aa8.49□□□□□ -1.05
SNCA-208ENST00000505199 SUMO2P61956 95 aaKnown RBP8.49□□□□□ -1.05
SNCA-208ENST00000505199 COTL1Q14019 142 aa8.49□□□□□ -1.05
SNCA-208ENST00000505199 ELOBQ15370 118 aa8.49□□□□□ -1.05
SNCA-208ENST00000505199 NFE4Q86UQ8 179 aa8.49□□□□□ -1.05
SNCA-208ENST00000505199 NIT1Q86X76 327 aa8.49□□□□□ -1.05
SNCA-208ENST00000505199 WFDC10BQ8IUB3 73 aa8.49□□□□□ -1.05
SNCA-208ENST00000505199 NRACQ8N912 160 aa8.49□□□□□ -1.05
SNCA-208ENST00000505199 TMEM70Q9BUB7 260 aa8.49□□□□□ -1.05
SNCA-208ENST00000505199 URGCP-MRPS24S4R325 110 aa8.49□□□□□ -1.05
SNCA-208ENST00000505199 PRSS47A8MTI9 375 aa8.48□□□□□ -1.05
SNCA-208ENST00000505199 SLC7A5P1Q8MH63 180 aa8.48□□□□□ -1.05
SNCA-208ENST00000505199 RPL39LQ96EH5 51 aaKnown RBP8.48□□□□□ -1.05
SNCA-208ENST00000505199 KMT2AQ03164 3969 aa8.48□□□□□ -1.05
SNCA-208ENST00000505199 A0A087WX48 190 aa8.47□□□□□ -1.05
SNCA-208ENST00000505199 A0A1B0GUV1 79 aa8.47□□□□□ -1.05
SNCA-208ENST00000505199 K7EMI3 77 aa8.47□□□□□ -1.05
SNCA-208ENST00000505199 RPS10P46783 165 aaKnown RBP8.47□□□□□ -1.05
SNCA-208ENST00000505199 C1orf134Q5TEV5 83 aa8.47□□□□□ -1.05
SNCA-208ENST00000505199 NTM-AS1Q6ZSK4 140 aa8.47□□□□□ -1.05
SNCA-208ENST00000505199 LINC00336Q6ZUF6 198 aa8.47□□□□□ -1.05
SNCA-208ENST00000505199 KIR2DL4Q99706 377 aa8.47□□□□□ -1.05
SNCA-208ENST00000505199 IGLV2-18A0A075B6J9 118 aa8.46□□□□□ -1.06
SNCA-208ENST00000505199 IBA57-AS1B1ANH7 110 aa8.46□□□□□ -1.06
SNCA-208ENST00000505199 D6R8Y8 96 aa8.46□□□□□ -1.06
SNCA-208ENST00000505199 TNFRSF6BO95407 300 aa8.46□□□□□ -1.06
SNCA-208ENST00000505199 SMAGPQ0VAQ4 97 aa8.46□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms