RNA–Protein interactions for RNA: ENST00000505081.5

DDX41-205, Transcript of DEAD-box helicase 41, humanhuman

TSL 2

Gene DDX41, Length 2,949 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-205ENST00000505081 TRBV6-5A0A0K0K1A5 114 aa11.83□□□□□ -0.52
DDX41-205ENST00000505081 TMEM238LA0A1B0GVL6 79 aa11.83□□□□□ -0.52
DDX41-205ENST00000505081 GAGE12HA6NDE8 117 aa11.83□□□□□ -0.52
DDX41-205ENST00000505081 A6NJY4 79 aa11.83□□□□□ -0.52
DDX41-205ENST00000505081 AMELXQ99217 191 aa11.83□□□□□ -0.52
DDX41-205ENST00000505081 RBMY1A1P0DJD3 496 aaKnown RBP11.82□□□□□ -0.52
DDX41-205ENST00000505081 RBMY1CP0DJD4 496 aa11.82□□□□□ -0.52
DDX41-205ENST00000505081 PROK1P58294 105 aa11.82□□□□□ -0.52
DDX41-205ENST00000505081 RBMY1FQ15415 496 aaKnown RBP11.82□□□□□ -0.52
DDX41-205ENST00000505081 ZNF580Q9UK33 172 aa11.82□□□□□ -0.52
DDX41-205ENST00000505081 PAPPA-AS1Q5QFB9 102 aa11.82□□□□□ -0.52
DDX41-205ENST00000505081 SAMD13Q5VXD3 122 aa11.82□□□□□ -0.52
DDX41-205ENST00000505081 NDUFA11Q86Y39 141 aa11.82□□□□□ -0.52
DDX41-205ENST00000505081 SYT8Q8NBV8 401 aa11.82□□□□□ -0.52
DDX41-205ENST00000505081 ZNF418Q8TF45 676 aaPredicted RBP11.82□□□□□ -0.52
DDX41-205ENST00000505081 J3QQQ9 107 aa11.81□□□□□ -0.52
DDX41-205ENST00000505081 IGHV3-30P01768 117 aa11.81□□□□□ -0.52
DDX41-205ENST00000505081 IGHV3-30-5P0DP03 117 aa11.81□□□□□ -0.52
DDX41-205ENST00000505081 PTH2Q96A98 100 aa11.81□□□□□ -0.52
DDX41-205ENST00000505081 MYO9AB2RTY4 2548 aa11.81□□□□□ -0.52
DDX41-205ENST00000505081 KNCNA6PVL3 124 aa11.81□□□□□ -0.52
DDX41-205ENST00000505081 HIST2H2BDQ6DRA6 164 aa11.81□□□□□ -0.52
DDX41-205ENST00000505081 CFC1BP0CG36 223 aa11.8□□□□□ -0.52
DDX41-205ENST00000505081 CFC1P0CG37 223 aa11.8□□□□□ -0.52
DDX41-205ENST00000505081 CFAP126Q5VTH2 177 aa11.8□□□□□ -0.52
DDX41-205ENST00000505081 C18orf65Q6ZTR6 163 aa11.8□□□□□ -0.52
DDX41-205ENST00000505081 DLX4Q92988 240 aaPredicted RBP11.8□□□□□ -0.52
DDX41-205ENST00000505081 A0A0J9YXV3 536 aa11.8□□□□□ -0.52
DDX41-205ENST00000505081 DEFB136Q30KP8 78 aa11.8□□□□□ -0.52
DDX41-205ENST00000505081 SLC25A29Q8N8R3 303 aa11.8□□□□□ -0.52
DDX41-205ENST00000505081 SIGMAR1Q99720 223 aa11.8□□□□□ -0.52
DDX41-205ENST00000505081 Q9UF83 564 aa11.8□□□□□ -0.52
DDX41-205ENST00000505081 LGALS3P17931 250 aaKnown RBP11.79□□□□□ -0.52
DDX41-205ENST00000505081 HOXD3P31249 432 aaPredicted RBP11.79□□□□□ -0.52
DDX41-205ENST00000505081 TRPT1Q86TN4 253 aaKnown RBP11.79□□□□□ -0.52
DDX41-205ENST00000505081 TEX15Q9BXT5 2789 aa11.79□□□□□ -0.52
DDX41-205ENST00000505081 LRRK2Q5S007 2527 aa11.79□□□□□ -0.52
DDX41-205ENST00000505081 ODF3Q96PU9 254 aa11.79□□□□□ -0.52
DDX41-205ENST00000505081 NSUN5P1Q3KNT7 163 aa11.78□□□□□ -0.52
DDX41-205ENST00000505081 CEMP1Q6PRD7 247 aaPredicted RBP11.78□□□□□ -0.52
DDX41-205ENST00000505081 ABCA12Q86UK0 2595 aa11.78□□□□□ -0.52
DDX41-205ENST00000505081 NFE4Q86UQ8 179 aa11.78□□□□□ -0.52
DDX41-205ENST00000505081 C20orf203Q8NBC4 194 aa11.78□□□□□ -0.52
DDX41-205ENST00000505081 J3QR89 54 aa11.78□□□□□ -0.52
DDX41-205ENST00000505081 UBE2D3P61077 147 aa11.78□□□□□ -0.52
DDX41-205ENST00000505081 UBE2D2P62837 147 aa11.78□□□□□ -0.52
DDX41-205ENST00000505081 RNASE13Q5GAN3 156 aaKnown RBP11.78□□□□□ -0.52
DDX41-205ENST00000505081 TCL1BO95988 128 aa11.77□□□□□ -0.52
DDX41-205ENST00000505081 TMEM223A0PJW6 202 aa11.77□□□□□ -0.53
DDX41-205ENST00000505081 EIF4EBP3O60516 100 aaPredicted RBP11.77□□□□□ -0.53
DDX41-205ENST00000505081 ZNF22P17026 224 aaPredicted RBP11.77□□□□□ -0.53
DDX41-205ENST00000505081 PTPN13Q12923 2485 aa11.77□□□□□ -0.53
DDX41-205ENST00000505081 ADARB2-AS1A8MUL3 147 aa11.76□□□□□ -0.53
DDX41-205ENST00000505081 IGLV4-3A0A075B6K6 122 aa11.76□□□□□ -0.53
DDX41-205ENST00000505081 I3L3M4 83 aa11.76□□□□□ -0.53
DDX41-205ENST00000505081 SLURP1P55000 103 aa11.76□□□□□ -0.53
DDX41-205ENST00000505081 DUX3Q96PT4 197 aa11.76□□□□□ -0.53
DDX41-205ENST00000505081 BEX4Q9NWD9 120 aaPredicted RBP11.76□□□□□ -0.53
DDX41-205ENST00000505081 RHOHQ15669 191 aa11.76□□□□□ -0.53
DDX41-205ENST00000505081 TCTEX1D4Q5JR98 221 aa11.76□□□□□ -0.53
DDX41-205ENST00000505081 RAX2Q96IS3 184 aa11.76□□□□□ -0.53
DDX41-205ENST00000505081 TLN2Q9Y4G6 2542 aa11.76□□□□□ -0.53
DDX41-205ENST00000505081 TRAV2A0A0B4J234 112 aa11.75□□□□□ -0.53
DDX41-205ENST00000505081 H7C2G1 150 aa11.75□□□□□ -0.53
DDX41-205ENST00000505081 LINC01356Q8N9X3 169 aa11.75□□□□□ -0.53
DDX41-205ENST00000505081 SPATA25Q9BR10 227 aa11.75□□□□□ -0.53
DDX41-205ENST00000505081 A4D1N5 150 aa11.75□□□□□ -0.53
DDX41-205ENST00000505081 RHODO00212 210 aa11.75□□□□□ -0.53
DDX41-205ENST00000505081 DEFB131AP59861 70 aa11.75□□□□□ -0.53
DDX41-205ENST00000505081 FOXI1Q12951 378 aa11.75□□□□□ -0.53
DDX41-205ENST00000505081 C1QTNF4Q9BXJ3 329 aa11.74□□□□□ -0.53
DDX41-205ENST00000505081 VCX2Q9H322 139 aa11.74□□□□□ -0.53
DDX41-205ENST00000505081 LEPROTO15243 131 aa11.74□□□□□ -0.53
DDX41-205ENST00000505081 C10orf126Q8N4M7 172 aa11.74□□□□□ -0.53
DDX41-205ENST00000505081 FAM104AQ969W3 186 aa11.74□□□□□ -0.53
DDX41-205ENST00000505081 SPXQ9BT56 116 aa11.74□□□□□ -0.53
DDX41-205ENST00000505081 RBMY1BA6NDE4 496 aaKnown RBP11.73□□□□□ -0.53
DDX41-205ENST00000505081 RBMY1EA6NEQ0 496 aaKnown RBP11.73□□□□□ -0.53
DDX41-205ENST00000505081 RBMY1DP0C7P1 496 aaKnown RBP11.73□□□□□ -0.53
DDX41-205ENST00000505081 ZNF702PQ9H963 129 aa11.73□□□□□ -0.53
DDX41-205ENST00000505081 Q6ZSN1 163 aa11.73□□□□□ -0.53
DDX41-205ENST00000505081 SCGB1C2P0DMR2 95 aa11.73□□□□□ -0.53
DDX41-205ENST00000505081 GATA3P23771 443 aa11.73□□□□□ -0.53
DDX41-205ENST00000505081 MUSTN1Q8IVN3 82 aa11.73□□□□□ -0.53
DDX41-205ENST00000505081 PRO1854Q9UHT4 67 aa11.73□□□□□ -0.53
DDX41-205ENST00000505081 NACAE9PAV3 2078 aa11.72□□□□□ -0.53
DDX41-205ENST00000505081 TRGV11A0A075B6L2 103 aa11.72□□□□□ -0.53
DDX41-205ENST00000505081 A0A096LNT2 108 aa11.72□□□□□ -0.53
DDX41-205ENST00000505081 FHL3Q13643 280 aa11.72□□□□□ -0.53
DDX41-205ENST00000505081 VPREB3Q9UKI3 123 aa11.72□□□□□ -0.53
DDX41-205ENST00000505081 ZNF462Q96JM2 2506 aa11.72□□□□□ -0.53
DDX41-205ENST00000505081 CHD6Q8TD26 2715 aa11.72□□□□□ -0.53
DDX41-205ENST00000505081 TRAV8-3A0A0A6YYJ7 113 aa11.72□□□□□ -0.53
DDX41-205ENST00000505081 CARD19Q96LW7 228 aa11.72□□□□□ -0.53
DDX41-205ENST00000505081 CD28P10747 220 aa11.71□□□□□ -0.53
DDX41-205ENST00000505081 EPG5Q9HCE0 2579 aa11.71□□□□□ -0.54
DDX41-205ENST00000505081 A8MZ25 164 aa11.71□□□□□ -0.54
DDX41-205ENST00000505081 TMEM89A2RUT3 159 aa11.7□□□□□ -0.54
DDX41-205ENST00000505081 PRRC2AP48634 2157 aaKnown RBP11.7□□□□□ -0.54
DDX41-205ENST00000505081 NAV2Q8IVL1 2488 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 323.5 ms