RNA–Protein interactions for RNA: ENST00000504526.1

TRAPPC11-203, Transcript of trafficking protein particle complex 11, humanhuman

TSL 4

Gene TRAPPC11, Length 503 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-203ENST00000504526 FAM231DQ6ZW35 169 aa14.21□□□□□ -0.13
TRAPPC11-203ENST00000504526 NIT1Q86X76 327 aa14.21□□□□□ -0.13
TRAPPC11-203ENST00000504526 Q9HAA7 133 aa14.21□□□□□ -0.13
TRAPPC11-203ENST00000504526 TRAV8-3A0A0A6YYJ7 113 aa14.2□□□□□ -0.14
TRAPPC11-203ENST00000504526 MGPP08493 103 aa14.2□□□□□ -0.14
TRAPPC11-203ENST00000504526 NTF3P20783 257 aa14.2□□□□□ -0.14
TRAPPC11-203ENST00000504526 KCNIP4Q6PIL6 250 aa14.2□□□□□ -0.14
TRAPPC11-203ENST00000504526 SMIM7Q9BQ49 75 aa14.2□□□□□ -0.14
TRAPPC11-203ENST00000504526 TM2D2Q9BX73 214 aa14.2□□□□□ -0.14
TRAPPC11-203ENST00000504526 CNFNQ9BYD5 112 aa14.2□□□□□ -0.14
TRAPPC11-203ENST00000504526 DYNC1H1Q14204 4646 aaKnown RBP14.2□□□□□ -0.14
TRAPPC11-203ENST00000504526 TRBV6-8A0A0A6YYG3 113 aa14.19□□□□□ -0.14
TRAPPC11-203ENST00000504526 GATCO43716 136 aaKnown RBP14.19□□□□□ -0.14
TRAPPC11-203ENST00000504526 DAZ4Q86SG3 579 aaKnown RBP14.19□□□□□ -0.14
TRAPPC11-203ENST00000504526 DNAJC30Q96LL9 226 aa14.19□□□□□ -0.14
TRAPPC11-203ENST00000504526 DPH3P1Q9H4G8 78 aa14.19□□□□□ -0.14
TRAPPC11-203ENST00000504526 DAZ3Q9NR90 486 aaKnown RBP14.19□□□□□ -0.14
TRAPPC11-203ENST00000504526 A0A087WX48 190 aa14.18□□□□□ -0.14
TRAPPC11-203ENST00000504526 A8MWL6 223 aa14.18□□□□□ -0.14
TRAPPC11-203ENST00000504526 CDK2AP2O75956 126 aa14.18□□□□□ -0.14
TRAPPC11-203ENST00000504526 ELOBQ15370 118 aa14.18□□□□□ -0.14
TRAPPC11-203ENST00000504526 Q8N3U1 123 aa14.18□□□□□ -0.14
TRAPPC11-203ENST00000504526 ZNF727A8MUV8 499 aa14.17□□□□□ -0.14
TRAPPC11-203ENST00000504526 M0QY20 66 aa14.17□□□□□ -0.14
TRAPPC11-203ENST00000504526 SRP19P09132 144 aaKnown RBP14.17□□□□□ -0.14
TRAPPC11-203ENST00000504526 PKIAP61925 76 aa14.17□□□□□ -0.14
TRAPPC11-203ENST00000504526 CT83Q5H943 113 aa14.17□□□□□ -0.14
TRAPPC11-203ENST00000504526 TEX261Q6UWH6 196 aa14.17□□□□□ -0.14
TRAPPC11-203ENST00000504526 TWIST1Q15672 202 aa14.16□□□□□ -0.14
TRAPPC11-203ENST00000504526 SUMO4Q6EEV6 95 aa14.16□□□□□ -0.14
TRAPPC11-203ENST00000504526 LINC01551Q86U37 167 aa14.16□□□□□ -0.14
TRAPPC11-203ENST00000504526 COX11Q9Y6N1 276 aa14.16□□□□□ -0.14
TRAPPC11-203ENST00000504526 RASL11AQ6T310 242 aa14.15□□□□□ -0.14
TRAPPC11-203ENST00000504526 RMI2Q96E14 147 aa14.15□□□□□ -0.14
TRAPPC11-203ENST00000504526 LRCOL1A6NCL2 159 aa14.14□□□□□ -0.15
TRAPPC11-203ENST00000504526 SMIM15Q7Z3B0 74 aa14.14□□□□□ -0.15
TRAPPC11-203ENST00000504526 GTSF1Q8WW33 167 aa14.14□□□□□ -0.15
TRAPPC11-203ENST00000504526 TMEM262E9PQX1 116 aa14.13□□□□□ -0.15
TRAPPC11-203ENST00000504526 FAM74A3Q4VXF1 159 aa14.13□□□□□ -0.15
TRAPPC11-203ENST00000504526 KLK12Q9UKR0 248 aa14.13□□□□□ -0.15
TRAPPC11-203ENST00000504526 FOXA3P55318 350 aaPredicted RBP14.12□□□□□ -0.15
TRAPPC11-203ENST00000504526 CHCHD5Q9BSY4 110 aa14.12□□□□□ -0.15
TRAPPC11-203ENST00000504526 SMDT1Q9H4I9 107 aa14.12□□□□□ -0.15
TRAPPC11-203ENST00000504526 NIT2Q9NQR4 276 aa14.12□□□□□ -0.15
TRAPPC11-203ENST00000504526 OSTCQ9NRP0 149 aa14.12□□□□□ -0.15
TRAPPC11-203ENST00000504526 TRBV25-1A0A075B6N4 114 aa14.11□□□□□ -0.15
TRAPPC11-203ENST00000504526 Q0VG73 95 aa14.11□□□□□ -0.15
TRAPPC11-203ENST00000504526 PEA15Q15121 130 aa14.11□□□□□ -0.15
TRAPPC11-203ENST00000504526 NTM-AS1Q6ZSK4 140 aa14.11□□□□□ -0.15
TRAPPC11-203ENST00000504526 NTN5Q8WTR8 489 aaPredicted RBP14.11□□□□□ -0.15
TRAPPC11-203ENST00000504526 FRZBQ92765 325 aa14.11□□□□□ -0.15
TRAPPC11-203ENST00000504526 BORCS7Q96B45 105 aa14.11□□□□□ -0.15
TRAPPC11-203ENST00000504526 FAM231BA6NCW3 169 aa14.1□□□□□ -0.15
TRAPPC11-203ENST00000504526 C15orf54Q8N8G6 183 aa14.1□□□□□ -0.15
TRAPPC11-203ENST00000504526 GFRA4Q9GZZ7 299 aa14.1□□□□□ -0.15
TRAPPC11-203ENST00000504526 IQCJQ1A5X6 159 aa14.09□□□□□ -0.15
TRAPPC11-203ENST00000504526 TMEM241Q24JQ0 296 aa14.09□□□□□ -0.15
TRAPPC11-203ENST00000504526 Q8N814 137 aa14.09□□□□□ -0.15
TRAPPC11-203ENST00000504526 TSKUQ8WUA8 353 aa14.09□□□□□ -0.15
TRAPPC11-203ENST00000504526 PGLYRP4Q96LB8 373 aa14.09□□□□□ -0.15
TRAPPC11-203ENST00000504526 IGHV1-24A0A0C4DH33 117 aa14.08□□□□□ -0.16
TRAPPC11-203ENST00000504526 UBE2WQ96B02 151 aa14.08□□□□□ -0.16
TRAPPC11-203ENST00000504526 MPV17L2Q567V2 206 aa14.07□□□□□ -0.16
TRAPPC11-203ENST00000504526 ATRAIDQ6UW56 229 aa14.07□□□□□ -0.16
TRAPPC11-203ENST00000504526 IGKV2D-24A0A075B6R9 120 aa14.06□□□□□ -0.16
TRAPPC11-203ENST00000504526 IGLV5-52A0A0A0MRZ9 124 aa14.06□□□□□ -0.16
TRAPPC11-203ENST00000504526 CRPP02741 224 aa14.06□□□□□ -0.16
TRAPPC11-203ENST00000504526 FUSP35637 526 aaKnown RBP eCLIP14.06□□□□□ -0.16
TRAPPC11-203ENST00000504526 RYR1P21817 5038 aa14.05□□□□□ -0.16
TRAPPC11-203ENST00000504526 HIGD1CA8MV81 97 aa14.05□□□□□ -0.16
TRAPPC11-203ENST00000504526 ANGP03950 147 aaKnown RBP14.05□□□□□ -0.16
TRAPPC11-203ENST00000504526 GCSHP23434 173 aa14.05□□□□□ -0.16
TRAPPC11-203ENST00000504526 GATD1Q8NB37 220 aa14.05□□□□□ -0.16
TRAPPC11-203ENST00000504526 ISOC2Q96AB3 205 aa14.05□□□□□ -0.16
TRAPPC11-203ENST00000504526 NAT8Q9UHE5 227 aa14.05□□□□□ -0.16
TRAPPC11-203ENST00000504526 PCLOQ9Y6V0 5065 aa14.04□□□□□ -0.16
TRAPPC11-203ENST00000504526 LRP1BQ9NZR2 4599 aa14.04□□□□□ -0.16
TRAPPC11-203ENST00000504526 A0A1B0GUT8 65 aa14.04□□□□□ -0.16
TRAPPC11-203ENST00000504526 C9JQL5 133 aa14.04□□□□□ -0.16
TRAPPC11-203ENST00000504526 RPL23P62829 140 aaKnown RBP14.04□□□□□ -0.16
TRAPPC11-203ENST00000504526 RBX1P62877 108 aa14.03□□□□□ -0.16
TRAPPC11-203ENST00000504526 GAGE6Q13070 117 aa14.03□□□□□ -0.16
TRAPPC11-203ENST00000504526 COTL1Q14019 142 aa14.03□□□□□ -0.16
TRAPPC11-203ENST00000504526 Q8N976 141 aa14.03□□□□□ -0.16
TRAPPC11-203ENST00000504526 TMEM243Q9BU79 118 aa14.03□□□□□ -0.16
TRAPPC11-203ENST00000504526 C1orf43Q9BWL3 253 aa14.03□□□□□ -0.16
TRAPPC11-203ENST00000504526 V9GYV3 84 aa14.03□□□□□ -0.16
TRAPPC11-203ENST00000504526 SRSF3P84103 164 aaKnown RBP14.02□□□□□ -0.17
TRAPPC11-203ENST00000504526 ADIRFQ15847 76 aa14.02□□□□□ -0.17
TRAPPC11-203ENST00000504526 ENHOQ6UWT2 76 aa14.02□□□□□ -0.17
TRAPPC11-203ENST00000504526 MAPKAPK5-AS1Q8N8E1 139 aa14.02□□□□□ -0.17
TRAPPC11-203ENST00000504526 TRAV26-2A0A0B4J265 109 aa14.01□□□□□ -0.17
TRAPPC11-203ENST00000504526 KRTAP10-1P60331 282 aa14.01□□□□□ -0.17
TRAPPC11-203ENST00000504526 MIAQ16674 131 aa14.01□□□□□ -0.17
TRAPPC11-203ENST00000504526 TMEM191AQ9H0A3 160 aa14.01□□□□□ -0.17
TRAPPC11-203ENST00000504526 WFDC2Q14508 124 aa14□□□□□ -0.17
TRAPPC11-203ENST00000504526 BAALCQ8WXS3 180 aa14□□□□□ -0.17
TRAPPC11-203ENST00000504526 PRR34Q9NV39 138 aa14□□□□□ -0.17
TRAPPC11-203ENST00000504526 AMTP48728 403 aa13.99□□□□□ -0.17
TRAPPC11-203ENST00000504526 RIGQ13278 110 aa13.99□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms