RNA–Protein interactions for RNA: ENST00000504178.1

SYNPO2-205, Transcript of synaptopodin 2, humanhuman

TSL 1 (best)

Gene SYNPO2, Length 6,779 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2-205ENST00000504178 TRBV10-1A0A0K0K1A3 114 aa5.43□□□□□ -1.54
SYNPO2-205ENST00000504178 JMJD7-PLA2G4BH0Y9G9 81 aa5.43□□□□□ -1.54
SYNPO2-205ENST00000504178 FAM110AQ9BQ89 295 aa5.43□□□□□ -1.54
SYNPO2-205ENST00000504178 SPATA25Q9BR10 227 aa5.43□□□□□ -1.54
SYNPO2-205ENST00000504178 DENND4AQ7Z401 1863 aa5.43□□□□□ -1.54
SYNPO2-205ENST00000504178 C20orf203Q8NBC4 194 aa5.43□□□□□ -1.54
SYNPO2-205ENST00000504178 SPANXCQ9NY87 97 aa5.43□□□□□ -1.54
SYNPO2-205ENST00000504178 MED12Q93074 2177 aa5.43□□□□□ -1.54
SYNPO2-205ENST00000504178 FXYD2P54710 66 aa5.43□□□□□ -1.54
SYNPO2-205ENST00000504178 FAM222AQ5U5X8 452 aa5.43□□□□□ -1.54
SYNPO2-205ENST00000504178 ZNF843Q8N446 348 aa5.43□□□□□ -1.54
SYNPO2-205ENST00000504178 C20orf173Q96LM9 149 aa5.43□□□□□ -1.54
SYNPO2-205ENST00000504178 HIGD1BQ9P298 99 aa5.43□□□□□ -1.54
SYNPO2-205ENST00000504178 TMEM256-PLSCR3K7ERE1 68 aa5.43□□□□□ -1.54
SYNPO2-205ENST00000504178 C19orf71A6NCJ1 209 aa5.42□□□□□ -1.54
SYNPO2-205ENST00000504178 SMIM9A6NGZ8 99 aa5.42□□□□□ -1.54
SYNPO2-205ENST00000504178 DEFB131BA0A096LNP1 70 aa5.42□□□□□ -1.54
SYNPO2-205ENST00000504178 DEFB114Q30KQ6 69 aa5.42□□□□□ -1.54
SYNPO2-205ENST00000504178 TRBV10-2A0A0K0K1G8 114 aa5.42□□□□□ -1.54
SYNPO2-205ENST00000504178 ODF1Q14990 250 aa5.42□□□□□ -1.54
SYNPO2-205ENST00000504178 TTTY13Q9BZ97 58 aa5.42□□□□□ -1.54
SYNPO2-205ENST00000504178 LY6G6DO95868 133 aa5.41□□□□□ -1.54
SYNPO2-205ENST00000504178 IGF1P05019 195 aa5.41□□□□□ -1.54
SYNPO2-205ENST00000504178 ZNF80P51504 273 aaPredicted RBP5.41□□□□□ -1.54
SYNPO2-205ENST00000504178 CHCHD10Q8WYQ3 142 aaPredicted RBP5.41□□□□□ -1.54
SYNPO2-205ENST00000504178 SPTBN2O15020 2390 aa5.41□□□□□ -1.54
SYNPO2-205ENST00000504178 LRCOL1A6NCL2 159 aa5.41□□□□□ -1.54
SYNPO2-205ENST00000504178 H7C423 109 aa5.41□□□□□ -1.54
SYNPO2-205ENST00000504178 MIAQ16674 131 aa5.41□□□□□ -1.54
SYNPO2-205ENST00000504178 UFSP1Q6NVU6 142 aa5.41□□□□□ -1.54
SYNPO2-205ENST00000504178 SHISA2Q6UWI4 295 aa5.41□□□□□ -1.54
SYNPO2-205ENST00000504178 ALPK2Q86TB3 2170 aa5.41□□□□□ -1.54
SYNPO2-205ENST00000504178 ATOX1O00244 68 aa5.41□□□□□ -1.54
SYNPO2-205ENST00000504178 FAM19A1Q7Z5A9 133 aa5.41□□□□□ -1.54
SYNPO2-205ENST00000504178 EML6Q6ZMW3 1958 aa5.4□□□□□ -1.54
SYNPO2-205ENST00000504178 TNRC6AQ8NDV7 1962 aaKnown RBP5.4□□□□□ -1.54
SYNPO2-205ENST00000504178 LINC00467Q9BRT7 94 aa5.4□□□□□ -1.54
SYNPO2-205ENST00000504178 C11orf1Q9H5F2 150 aa5.4□□□□□ -1.54
SYNPO2-205ENST00000504178 NUP210LQ5VU65 1888 aa5.4□□□□□ -1.54
SYNPO2-205ENST00000504178 LINC00482Q8N8I6 264 aa5.4□□□□□ -1.54
SYNPO2-205ENST00000504178 LINC00574Q9H8X3 128 aa5.4□□□□□ -1.54
SYNPO2-205ENST00000504178 COA6Q5JTJ3 125 aaKnown RBP5.4□□□□□ -1.55
SYNPO2-205ENST00000504178 SS18L2Q9UHA2 77 aa5.4□□□□□ -1.55
SYNPO2-205ENST00000504178 SEC61GP60059 68 aa5.4□□□□□ -1.55
SYNPO2-205ENST00000504178 TDRG1Q3Y452 100 aa5.4□□□□□ -1.55
SYNPO2-205ENST00000504178 HIST2H2BDQ6DRA6 164 aa5.4□□□□□ -1.55
SYNPO2-205ENST00000504178 NEXN-AS1Q8NBZ9 246 aa5.4□□□□□ -1.55
SYNPO2-205ENST00000504178 FAM236AA0A1B0GUQ0 79 aa5.4□□□□□ -1.55
SYNPO2-205ENST00000504178 FAM236BA0A1B0GV22 79 aa5.4□□□□□ -1.55
SYNPO2-205ENST00000504178 Q6ZSV7 163 aa5.4□□□□□ -1.55
SYNPO2-205ENST00000504178 K7EQG2 157 aa5.39□□□□□ -1.55
SYNPO2-205ENST00000504178 C11orf71Q6IPW1 123 aa5.39□□□□□ -1.55
SYNPO2-205ENST00000504178 HIGD2AQ9BW72 106 aa5.39□□□□□ -1.55
SYNPO2-205ENST00000504178 A0A087WZ39 114 aa5.39□□□□□ -1.55
SYNPO2-205ENST00000504178 C1orf229Q6ZS94 237 aaPredicted RBP5.39□□□□□ -1.55
SYNPO2-205ENST00000504178 TEN1Q86WV5 123 aa5.39□□□□□ -1.55
SYNPO2-205ENST00000504178 IGKV4-1P06312 121 aa5.39□□□□□ -1.55
SYNPO2-205ENST00000504178 FRMD6-AS1P0C7T7 363 aa5.39□□□□□ -1.55
SYNPO2-205ENST00000504178 FAM19A5Q7Z5A7 132 aaPredicted RBP5.39□□□□□ -1.55
SYNPO2-205ENST00000504178 CRYGBP07316 175 aa5.39□□□□□ -1.55
SYNPO2-205ENST00000504178 P0C879 139 aa5.39□□□□□ -1.55
SYNPO2-205ENST00000504178 KIR2DL5BQ8NHK3 375 aa5.39□□□□□ -1.55
SYNPO2-205ENST00000504178 A0A0J9YXY3 114 aa5.38□□□□□ -1.55
SYNPO2-205ENST00000504178 MIFP14174 115 aa5.38□□□□□ -1.55
SYNPO2-205ENST00000504178 SMIM20Q8N5G0 67 aa5.38□□□□□ -1.55
SYNPO2-205ENST00000504178 CFAP126Q5VTH2 177 aa5.38□□□□□ -1.55
SYNPO2-205ENST00000504178 AHCTF1Q8WYP5 2266 aa5.38□□□□□ -1.55
SYNPO2-205ENST00000504178 IGKV2D-26A0A0A0MRZ7 120 aa5.38□□□□□ -1.55
SYNPO2-205ENST00000504178 LY6LH3BQJ8 138 aa5.38□□□□□ -1.55
SYNPO2-205ENST00000504178 ZNF702PQ9H963 129 aa5.38□□□□□ -1.55
SYNPO2-205ENST00000504178 CACNA1BQ00975 2339 aa5.38□□□□□ -1.55
SYNPO2-205ENST00000504178 B5MCH6 92 aa5.37□□□□□ -1.55
SYNPO2-205ENST00000504178 FOXI1Q12951 378 aa5.37□□□□□ -1.55
SYNPO2-205ENST00000504178 WFDC2Q14508 124 aa5.37□□□□□ -1.55
SYNPO2-205ENST00000504178 H3BT86 120 aa5.37□□□□□ -1.55
SYNPO2-205ENST00000504178 FSTL3O95633 263 aa5.37□□□□□ -1.55
SYNPO2-205ENST00000504178 C22orf34Q6ZV56 151 aa5.37□□□□□ -1.55
SYNPO2-205ENST00000504178 TRAV10A0A0B4J240 114 aa5.37□□□□□ -1.55
SYNPO2-205ENST00000504178 PDE6GP18545 87 aa5.37□□□□□ -1.55
SYNPO2-205ENST00000504178 C10orf99Q6UWK7 81 aa5.37□□□□□ -1.55
SYNPO2-205ENST00000504178 IGLV2-33A0A075B6J2 118 aaPredicted RBP5.37□□□□□ -1.55
SYNPO2-205ENST00000504178 TAX1BP3O14907 124 aa5.37□□□□□ -1.55
SYNPO2-205ENST00000504178 LINC00322Q6ZN03 302 aaPredicted RBP5.37□□□□□ -1.55
SYNPO2-205ENST00000504178 TMEM223A0PJW6 202 aa5.37□□□□□ -1.55
SYNPO2-205ENST00000504178 DOCK11Q5JSL3 2073 aa5.37□□□□□ -1.55
SYNPO2-205ENST00000504178 A0A1B0GXF2 115 aa5.37□□□□□ -1.55
SYNPO2-205ENST00000504178 IGLC6P0CF74 106 aa5.37□□□□□ -1.55
SYNPO2-205ENST00000504178 GDF5OSQ5U4N7 250 aa5.37□□□□□ -1.55
SYNPO2-205ENST00000504178 IGLV2-8P01709 118 aa5.36□□□□□ -1.55
SYNPO2-205ENST00000504178 C7orf33Q8WU49 177 aa5.36□□□□□ -1.55
SYNPO2-205ENST00000504178 UPK3BQ9BT76 320 aa5.36□□□□□ -1.55
SYNPO2-205ENST00000504178 POLEQ07864 2286 aa5.36□□□□□ -1.55
SYNPO2-205ENST00000504178 DYSFO75923 2080 aa5.36□□□□□ -1.55
SYNPO2-205ENST00000504178 TCL1BO95988 128 aa5.36□□□□□ -1.55
SYNPO2-205ENST00000504178 EIF4EBP1Q13541 118 aaPredicted RBP5.36□□□□□ -1.55
SYNPO2-205ENST00000504178 ZFAND3Q9H8U3 227 aa5.36□□□□□ -1.55
SYNPO2-205ENST00000504178 COL6A6A6NMZ7 2263 aa5.36□□□□□ -1.55
SYNPO2-205ENST00000504178 A0A096LNI7 61 aa5.36□□□□□ -1.55
SYNPO2-205ENST00000504178 BRWD1-AS2P59051 145 aa5.36□□□□□ -1.55
SYNPO2-205ENST00000504178 CACNA1DQ01668 2161 aa5.36□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms