RNA–Protein interactions for RNA: ENST00000502443.1

USP46-203, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 2

Gene USP46, Length 572 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-203ENST00000502443 KIF25-AS1Q9Y6Z4 181 aa4.99□□□□□ -1.61
USP46-203ENST00000502443 TRBV7-3A0A075B6L6 115 aa4.98□□□□□ -1.61
USP46-203ENST00000502443 TRAV9-2A0A087WT02 112 aa4.98□□□□□ -1.61
USP46-203ENST00000502443 PRSS29PA6NIE9 313 aa4.98□□□□□ -1.61
USP46-203ENST00000502443 LINC00694P0DN24 101 aa4.98□□□□□ -1.61
USP46-203ENST00000502443 LINC00315P59091 139 aa4.98□□□□□ -1.61
USP46-203ENST00000502443 RPL36AP83881 106 aaKnown RBP4.98□□□□□ -1.61
USP46-203ENST00000502443 CT83Q5H943 113 aa4.98□□□□□ -1.61
USP46-203ENST00000502443 LELP1Q5T871 98 aa4.98□□□□□ -1.61
USP46-203ENST00000502443 WDR73Q6P4I2 378 aa4.98□□□□□ -1.61
USP46-203ENST00000502443 SREK1IP1Q8N9Q2 155 aaPredicted RBP4.98□□□□□ -1.61
USP46-203ENST00000502443 RPL36ALQ969Q0 106 aaKnown RBP4.98□□□□□ -1.61
USP46-203ENST00000502443 PGLYRP4Q96LB8 373 aa4.98□□□□□ -1.61
USP46-203ENST00000502443 CNFNQ9BYD5 112 aa4.98□□□□□ -1.61
USP46-203ENST00000502443 OSTCQ9NRP0 149 aa4.98□□□□□ -1.61
USP46-203ENST00000502443 IGHV3-38A0A0C4DH36 116 aa4.97□□□□□ -1.61
USP46-203ENST00000502443 HIGD1CA8MV81 97 aa4.97□□□□□ -1.61
USP46-203ENST00000502443 MT-ND4LP03901 98 aa4.97□□□□□ -1.61
USP46-203ENST00000502443 DNAH10OSP0CZ25 163 aa4.97□□□□□ -1.61
USP46-203ENST00000502443 SMIM15Q7Z3B0 74 aa4.97□□□□□ -1.61
USP46-203ENST00000502443 NEXN-AS1Q8NBZ9 246 aa4.97□□□□□ -1.61
USP46-203ENST00000502443 OR10G8Q8NGN5 311 aa4.97□□□□□ -1.61
USP46-203ENST00000502443 TSKUQ8WUA8 353 aa4.97□□□□□ -1.61
USP46-203ENST00000502443 BORCS7Q96B45 105 aa4.97□□□□□ -1.61
USP46-203ENST00000502443 DPH3P1Q9H4G8 78 aa4.97□□□□□ -1.61
USP46-203ENST00000502443 H7C1H1 209 aa4.96□□□□□ -1.62
USP46-203ENST00000502443 K7EP13 123 aa4.96□□□□□ -1.62
USP46-203ENST00000502443 M0QY20 66 aa4.96□□□□□ -1.62
USP46-203ENST00000502443 FOXA3P55318 350 aaPredicted RBP4.96□□□□□ -1.62
USP46-203ENST00000502443 UBE2D3P61077 147 aa4.96□□□□□ -1.62
USP46-203ENST00000502443 UBE2D2P62837 147 aa4.96□□□□□ -1.62
USP46-203ENST00000502443 ELOBQ15370 118 aa4.96□□□□□ -1.62
USP46-203ENST00000502443 SUMO4Q6EEV6 95 aa4.96□□□□□ -1.62
USP46-203ENST00000502443 ANAPC16Q96DE5 110 aa4.96□□□□□ -1.62
USP46-203ENST00000502443 GFRA4Q9GZZ7 299 aa4.96□□□□□ -1.62
USP46-203ENST00000502443 TNFRSF18Q9Y5U5 241 aa4.96□□□□□ -1.62
USP46-203ENST00000502443 V9GYV3 84 aa4.96□□□□□ -1.62
USP46-203ENST00000502443 TRBV24-1A0A075B6N3 115 aa4.95□□□□□ -1.62
USP46-203ENST00000502443 TGIF2-C20orf24A0A0A6YYL0 155 aa4.95□□□□□ -1.62
USP46-203ENST00000502443 A0A1B0GUT8 65 aa4.95□□□□□ -1.62
USP46-203ENST00000502443 FAM231BA6NCW3 169 aa4.95□□□□□ -1.62
USP46-203ENST00000502443 PPP1R2P9O14990 202 aa4.95□□□□□ -1.62
USP46-203ENST00000502443 IGHV3-30P01768 117 aa4.95□□□□□ -1.62
USP46-203ENST00000502443 IGHV3-33P01772 117 aa4.95□□□□□ -1.62
USP46-203ENST00000502443 IGHV3-30-3P0DP02 117 aa4.95□□□□□ -1.62
USP46-203ENST00000502443 IGHV3-30-5P0DP03 117 aa4.95□□□□□ -1.62
USP46-203ENST00000502443 BTF3P20290 206 aaKnown RBP4.95□□□□□ -1.62
USP46-203ENST00000502443 TNP2Q05952 138 aa4.95□□□□□ -1.62
USP46-203ENST00000502443 LINC01556Q5JQF7 62 aa4.95□□□□□ -1.62
USP46-203ENST00000502443 RASL11AQ6T310 242 aa4.95□□□□□ -1.62
USP46-203ENST00000502443 DAZ4Q86SG3 579 aaKnown RBP4.95□□□□□ -1.62
USP46-203ENST00000502443 C10orf126Q8N4M7 172 aa4.95□□□□□ -1.62
USP46-203ENST00000502443 DAZ3Q9NR90 486 aaKnown RBP4.95□□□□□ -1.62
USP46-203ENST00000502443 URGCP-MRPS24S4R325 110 aa4.95□□□□□ -1.62
USP46-203ENST00000502443 FRAS1Q86XX4 4008 aa4.95□□□□□ -1.62
USP46-203ENST00000502443 TRAV26-2A0A0B4J265 109 aa4.94□□□□□ -1.62
USP46-203ENST00000502443 RAB5AP20339 215 aa4.94□□□□□ -1.62
USP46-203ENST00000502443 NFE4Q86UQ8 179 aa4.94□□□□□ -1.62
USP46-203ENST00000502443 Q8N3U1 123 aa4.94□□□□□ -1.62
USP46-203ENST00000502443 NUP35Q8NFH5 326 aa4.94□□□□□ -1.62
USP46-203ENST00000502443 DNAJC30Q96LL9 226 aa4.94□□□□□ -1.62
USP46-203ENST00000502443 IMMP2LQ96T52 175 aa4.94□□□□□ -1.62
USP46-203ENST00000502443 NIT2Q9NQR4 276 aa4.94□□□□□ -1.62
USP46-203ENST00000502443 NAT8BQ9UHF3 227 aa4.94□□□□□ -1.62
USP46-203ENST00000502443 TMA7Q9Y2S6 64 aaKnown RBP4.94□□□□□ -1.62
USP46-203ENST00000502443 TRBV6-8A0A0A6YYG3 113 aa4.93□□□□□ -1.62
USP46-203ENST00000502443 A0A1B0GVY2 172 aa4.93□□□□□ -1.62
USP46-203ENST00000502443 SMIM27A0A1W2PRY6 76 aa4.93□□□□□ -1.62
USP46-203ENST00000502443 IBA57-AS1B1ANH7 110 aa4.93□□□□□ -1.62
USP46-203ENST00000502443 RIGQ13278 110 aa4.93□□□□□ -1.62
USP46-203ENST00000502443 TMEM97Q5BJF2 176 aa4.93□□□□□ -1.62
USP46-203ENST00000502443 KCNIP4Q6PIL6 250 aa4.93□□□□□ -1.62
USP46-203ENST00000502443 NIT1Q86X76 327 aa4.93□□□□□ -1.62
USP46-203ENST00000502443 GATD1Q8NB37 220 aa4.93□□□□□ -1.62
USP46-203ENST00000502443 A0A087WX48 190 aa4.92□□□□□ -1.62
USP46-203ENST00000502443 TMEM262E9PQX1 116 aa4.92□□□□□ -1.62
USP46-203ENST00000502443 Q6ZRN7 208 aaPredicted RBP4.92□□□□□ -1.62
USP46-203ENST00000502443 NTM-AS1Q6ZSK4 140 aa4.92□□□□□ -1.62
USP46-203ENST00000502443 FRZBQ92765 325 aa4.92□□□□□ -1.62
USP46-203ENST00000502443 RPL39LQ96EH5 51 aaKnown RBP4.92□□□□□ -1.62
USP46-203ENST00000502443 CHCHD5Q9BSY4 110 aa4.92□□□□□ -1.62
USP46-203ENST00000502443 TMEM191AQ9H0A3 160 aa4.92□□□□□ -1.62
USP46-203ENST00000502443 Q9HAA7 133 aa4.92□□□□□ -1.62
USP46-203ENST00000502443 TRBV25-1A0A075B6N4 114 aa4.91□□□□□ -1.62
USP46-203ENST00000502443 IGHV1-24A0A0C4DH33 117 aa4.91□□□□□ -1.62
USP46-203ENST00000502443 PHOX2AO14813 284 aa4.91□□□□□ -1.62
USP46-203ENST00000502443 PSCAO43653 123 aa4.91□□□□□ -1.62
USP46-203ENST00000502443 RAB4AP20338 218 aa4.91□□□□□ -1.62
USP46-203ENST00000502443 S100PP25815 95 aa4.91□□□□□ -1.62
USP46-203ENST00000502443 CAMPP49913 170 aa4.91□□□□□ -1.62
USP46-203ENST00000502443 LAGE3Q14657 143 aa4.91□□□□□ -1.62
USP46-203ENST00000502443 AMN1Q8IY45 258 aa4.91□□□□□ -1.62
USP46-203ENST00000502443 DEFB104AQ8WTQ1 72 aa4.91□□□□□ -1.62
USP46-203ENST00000502443 RNF185Q96GF1 192 aa4.91□□□□□ -1.62
USP46-203ENST00000502443 KLK12Q9UKR0 248 aa4.91□□□□□ -1.62
USP46-203ENST00000502443 EPPK1P58107 5090 aaKnown RBP4.91□□□□□ -1.62
USP46-203ENST00000502443 DNAH10Q8IVF4 4471 aa4.91□□□□□ -1.62
USP46-203ENST00000502443 TRAV9-1A0A075B6T8 112 aa4.9□□□□□ -1.63
USP46-203ENST00000502443 TRAV8-3A0A0A6YYJ7 113 aa4.9□□□□□ -1.63
USP46-203ENST00000502443 A0A1B0GW15 77 aa4.9□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms