RNA–Protein interactions for RNA: ENST00000498822.5

PCBP4-218, Transcript of poly(rC) binding protein 4, humanhuman

TSL 2

Gene PCBP4, Length 2,547 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCBP4-218ENST00000498822 C9orf85Q96MD7 179 aa11.8□□□□□ -0.52
PCBP4-218ENST00000498822 KIR2DL4Q99706 377 aa11.8□□□□□ -0.52
PCBP4-218ENST00000498822 SPANXB1Q9NS25 103 aaPredicted RBP11.8□□□□□ -0.52
PCBP4-218ENST00000498822 PGPEP1Q9NXJ5 209 aa11.8□□□□□ -0.52
PCBP4-218ENST00000498822 K7EQG2 157 aa11.79□□□□□ -0.52
PCBP4-218ENST00000498822 RRN3P1Q2M238 152 aa11.79□□□□□ -0.52
PCBP4-218ENST00000498822 ZNF580Q9UK33 172 aa11.79□□□□□ -0.52
PCBP4-218ENST00000498822 TRBV7-9A0A0J9YWB2 115 aa11.79□□□□□ -0.52
PCBP4-218ENST00000498822 APOMO95445 188 aa11.79□□□□□ -0.52
PCBP4-218ENST00000498822 SNRPD3P62318 126 aaKnown RBP11.79□□□□□ -0.52
PCBP4-218ENST00000498822 SRSF9Q13242 221 aaKnown RBP eCLIP11.79□□□□□ -0.52
PCBP4-218ENST00000498822 ETDBQ3ZM63 59 aa11.79□□□□□ -0.52
PCBP4-218ENST00000498822 M0QY20 66 aa11.78□□□□□ -0.52
PCBP4-218ENST00000498822 SLURP1P55000 103 aa11.78□□□□□ -0.52
PCBP4-218ENST00000498822 ZNF876PQ49A33 203 aa11.78□□□□□ -0.52
PCBP4-218ENST00000498822 APCP25054 2843 aa11.78□□□□□ -0.52
PCBP4-218ENST00000498822 A0A1B0GWB2 263 aa11.78□□□□□ -0.52
PCBP4-218ENST00000498822 VCYO14598 125 aa11.78□□□□□ -0.52
PCBP4-218ENST00000498822 INSL3P51460 131 aa11.78□□□□□ -0.52
PCBP4-218ENST00000498822 PMVKQ15126 192 aa11.78□□□□□ -0.52
PCBP4-218ENST00000498822 UBR5O95071 2799 aaPredicted RBP11.77□□□□□ -0.52
PCBP4-218ENST00000498822 LINC01549A6NIU2 74 aa11.77□□□□□ -0.53
PCBP4-218ENST00000498822 SIGMAR1Q99720 223 aa11.77□□□□□ -0.53
PCBP4-218ENST00000498822 IGHV1OR15-1A0A075B7D0 117 aa11.77□□□□□ -0.53
PCBP4-218ENST00000498822 A0A096LNT2 108 aa11.77□□□□□ -0.53
PCBP4-218ENST00000498822 LGALS9O00182 355 aa11.77□□□□□ -0.53
PCBP4-218ENST00000498822 RNASE13Q5GAN3 156 aaKnown RBP11.77□□□□□ -0.53
PCBP4-218ENST00000498822 MRPL16Q9NX20 251 aaKnown RBP11.77□□□□□ -0.53
PCBP4-218ENST00000498822 ITPR3Q14573 2671 aa11.76□□□□□ -0.53
PCBP4-218ENST00000498822 PPP1R17O96001 155 aa11.76□□□□□ -0.53
PCBP4-218ENST00000498822 KRTAP10-9P60411 292 aa11.76□□□□□ -0.53
PCBP4-218ENST00000498822 LINC01356Q8N9X3 169 aa11.76□□□□□ -0.53
PCBP4-218ENST00000498822 C2CD3Q4AC94 2353 aa11.76□□□□□ -0.53
PCBP4-218ENST00000498822 TRBV27A0A0K0K1C4 114 aa11.76□□□□□ -0.53
PCBP4-218ENST00000498822 HOXA3O43365 443 aaPredicted RBP11.76□□□□□ -0.53
PCBP4-218ENST00000498822 CEMP1Q6PRD7 247 aaPredicted RBP11.76□□□□□ -0.53
PCBP4-218ENST00000498822 A0A0J9YY99 117 aa11.75□□□□□ -0.53
PCBP4-218ENST00000498822 CIDEAO60543 219 aa11.75□□□□□ -0.53
PCBP4-218ENST00000498822 AZU1P20160 251 aa11.75□□□□□ -0.53
PCBP4-218ENST00000498822 ZNF702PQ9H963 129 aa11.75□□□□□ -0.53
PCBP4-218ENST00000498822 TSSC4Q9Y5U2 329 aaPredicted RBP11.75□□□□□ -0.53
PCBP4-218ENST00000498822 TMEM238LA0A1B0GVL6 79 aa11.74□□□□□ -0.53
PCBP4-218ENST00000498822 GAGE12HA6NDE8 117 aa11.74□□□□□ -0.53
PCBP4-218ENST00000498822 GAGE13Q4V321 117 aa11.74□□□□□ -0.53
PCBP4-218ENST00000498822 TCTEX1D4Q5JR98 221 aa11.74□□□□□ -0.53
PCBP4-218ENST00000498822 TSPAN13O95857 204 aa11.74□□□□□ -0.53
PCBP4-218ENST00000498822 SPATA25Q9BR10 227 aa11.74□□□□□ -0.53
PCBP4-218ENST00000498822 LOC107984156A0A0G2JMH3 177 aa11.73□□□□□ -0.53
PCBP4-218ENST00000498822 ARL17AQ8IVW1 177 aa11.73□□□□□ -0.53
PCBP4-218ENST00000498822 GTSF1LQ9H1H1 148 aa11.73□□□□□ -0.53
PCBP4-218ENST00000498822 PRO0461Q9UI25 63 aa11.73□□□□□ -0.53
PCBP4-218ENST00000498822 VPREB3Q9UKI3 123 aa11.73□□□□□ -0.53
PCBP4-218ENST00000498822 FLNAP21333 2647 aaKnown RBP11.73□□□□□ -0.53
PCBP4-218ENST00000498822 SETXQ7Z333 2677 aaKnown RBP11.73□□□□□ -0.53
PCBP4-218ENST00000498822 RBMY1BA6NDE4 496 aaKnown RBP11.73□□□□□ -0.53
PCBP4-218ENST00000498822 RBMY1EA6NEQ0 496 aaKnown RBP11.73□□□□□ -0.53
PCBP4-218ENST00000498822 RBMY1DP0C7P1 496 aaKnown RBP11.73□□□□□ -0.53
PCBP4-218ENST00000498822 DEFB131AP59861 70 aa11.73□□□□□ -0.53
PCBP4-218ENST00000498822 ADARB2-AS1A8MUL3 147 aa11.72□□□□□ -0.53
PCBP4-218ENST00000498822 KHDC1LQ5JSQ8 128 aa11.72□□□□□ -0.53
PCBP4-218ENST00000498822 AMELXQ99217 191 aa11.72□□□□□ -0.53
PCBP4-218ENST00000498822 TIMM17AQ99595 171 aa11.72□□□□□ -0.53
PCBP4-218ENST00000498822 SYT8Q8NBV8 401 aa11.71□□□□□ -0.53
PCBP4-218ENST00000498822 ACANP16112 2415 aa11.71□□□□□ -0.53
PCBP4-218ENST00000498822 A0A0J9YXV3 536 aa11.71□□□□□ -0.53
PCBP4-218ENST00000498822 A6NJY4 79 aa11.71□□□□□ -0.53
PCBP4-218ENST00000498822 RPL32P62910 135 aaKnown RBP11.71□□□□□ -0.53
PCBP4-218ENST00000498822 UBE2D1P51668 147 aa11.7□□□□□ -0.54
PCBP4-218ENST00000498822 SMAGPQ0VAQ4 97 aa11.7□□□□□ -0.54
PCBP4-218ENST00000498822 SPAG8Q99932 426 aaPredicted RBP11.7□□□□□ -0.54
PCBP4-218ENST00000498822 MTORP42345 2549 aa11.7□□□□□ -0.54
PCBP4-218ENST00000498822 TRBV6-5A0A0K0K1A5 114 aa11.7□□□□□ -0.54
PCBP4-218ENST00000498822 PSMB2P49721 201 aa11.7□□□□□ -0.54
PCBP4-218ENST00000498822 HERVK_113P61574 105 aa11.7□□□□□ -0.54
PCBP4-218ENST00000498822 Q6ZSN1 163 aa11.7□□□□□ -0.54
PCBP4-218ENST00000498822 TMEM141Q96I45 108 aa11.7□□□□□ -0.54
PCBP4-218ENST00000498822 J3QQQ9 107 aa11.69□□□□□ -0.54
PCBP4-218ENST00000498822 GATA3P23771 443 aa11.69□□□□□ -0.54
PCBP4-218ENST00000498822 ZNF418Q8TF45 676 aaPredicted RBP11.69□□□□□ -0.54
PCBP4-218ENST00000498822 PTH2Q96A98 100 aa11.69□□□□□ -0.54
PCBP4-218ENST00000498822 SMCPP49901 116 aaPredicted RBP11.69□□□□□ -0.54
PCBP4-218ENST00000498822 TRPT1Q86TN4 253 aaKnown RBP11.69□□□□□ -0.54
PCBP4-218ENST00000498822 IGHV3-30P01768 117 aa11.68□□□□□ -0.54
PCBP4-218ENST00000498822 IGHV3-30-5P0DP03 117 aa11.68□□□□□ -0.54
PCBP4-218ENST00000498822 TMEM61Q8N0U2 210 aa11.68□□□□□ -0.54
PCBP4-218ENST00000498822 C20orf203Q8NBC4 194 aa11.68□□□□□ -0.54
PCBP4-218ENST00000498822 BBC3Q96PG8 261 aaPredicted RBP11.68□□□□□ -0.54
PCBP4-218ENST00000498822 ODF3Q96PU9 254 aa11.68□□□□□ -0.54
PCBP4-218ENST00000498822 EIF4EBP3O60516 100 aaPredicted RBP11.68□□□□□ -0.54
PCBP4-218ENST00000498822 NSUN5P1Q3KNT7 163 aa11.68□□□□□ -0.54
PCBP4-218ENST00000498822 NDUFA11Q86Y39 141 aa11.68□□□□□ -0.54
PCBP4-218ENST00000498822 C11orf44Q8N8P7 122 aa11.68□□□□□ -0.54
PCBP4-218ENST00000498822 IGLV4-3A0A075B6K6 122 aa11.67□□□□□ -0.54
PCBP4-218ENST00000498822 CFC1BP0CG36 223 aa11.67□□□□□ -0.54
PCBP4-218ENST00000498822 CFC1P0CG37 223 aa11.67□□□□□ -0.54
PCBP4-218ENST00000498822 Q6YL49 198 aa11.67□□□□□ -0.54
PCBP4-218ENST00000498822 FAM104AQ969W3 186 aa11.67□□□□□ -0.54
PCBP4-218ENST00000498822 IGHV3-38A0A0C4DH36 116 aa11.67□□□□□ -0.54
PCBP4-218ENST00000498822 A8MZ25 164 aa11.67□□□□□ -0.54
PCBP4-218ENST00000498822 H7C2G1 150 aa11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms