RNA–Protein interactions for RNA: ENST00000498731.5

SOX2-OT-218, SOX2 overlapping transcript, humanhuman

TSL 1 (best) BASIC

Gene SOX2-OT, Length 3,576 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-218ENST00000498731 SCGB1C2P0DMR2 95 aa4.4□□□□□ -1.71
SOX2-OT-218ENST00000498731 ZNF80P51504 273 aaPredicted RBP4.4□□□□□ -1.71
SOX2-OT-218ENST00000498731 OR4C13Q8NGP0 309 aa4.4□□□□□ -1.71
SOX2-OT-218ENST00000498731 BPESC1Q9GZL8 116 aa4.4□□□□□ -1.71
SOX2-OT-218ENST00000498731 TRAV8-4A0A0B4J246 113 aa4.39□□□□□ -1.71
SOX2-OT-218ENST00000498731 M0R2P5 195 aa4.39□□□□□ -1.71
SOX2-OT-218ENST00000498731 UPK2O00526 184 aa4.39□□□□□ -1.71
SOX2-OT-218ENST00000498731 AVPP01185 164 aa4.39□□□□□ -1.71
SOX2-OT-218ENST00000498731 GP9P14770 177 aa4.39□□□□□ -1.71
SOX2-OT-218ENST00000498731 PMVKQ15126 192 aa4.39□□□□□ -1.71
SOX2-OT-218ENST00000498731 IGFL4Q6B9Z1 124 aa4.39□□□□□ -1.71
SOX2-OT-218ENST00000498731 Q6Q795 121 aa4.39□□□□□ -1.71
SOX2-OT-218ENST00000498731 MAPK1IP1LQ8NDC0 245 aa4.39□□□□□ -1.71
SOX2-OT-218ENST00000498731 COL6A5A8TX70 2615 aa4.39□□□□□ -1.71
SOX2-OT-218ENST00000498731 J3KT08 172 aa4.39□□□□□ -1.71
SOX2-OT-218ENST00000498731 TRGV3P03979 118 aa4.39□□□□□ -1.71
SOX2-OT-218ENST00000498731 CGB3P0DN86 165 aa4.39□□□□□ -1.71
SOX2-OT-218ENST00000498731 CGB7P0DN87 165 aa4.39□□□□□ -1.71
SOX2-OT-218ENST00000498731 ITLN2Q8WWU7 325 aaPredicted RBP4.39□□□□□ -1.71
SOX2-OT-218ENST00000498731 NACAE9PAV3 2078 aa4.39□□□□□ -1.71
SOX2-OT-218ENST00000498731 IGHV3OR16-8A0A075B7F1 116 aa4.39□□□□□ -1.71
SOX2-OT-218ENST00000498731 PRYO14603 147 aa4.39□□□□□ -1.71
SOX2-OT-218ENST00000498731 RPL27AP46776 148 aaKnown RBP4.39□□□□□ -1.71
SOX2-OT-218ENST00000498731 EBI3Q14213 229 aa4.39□□□□□ -1.71
SOX2-OT-218ENST00000498731 TWIST1Q15672 202 aa4.39□□□□□ -1.71
SOX2-OT-218ENST00000498731 C2orf48Q96LS8 159 aa4.39□□□□□ -1.71
SOX2-OT-218ENST00000498731 IGLV2-18A0A075B6J9 118 aa4.38□□□□□ -1.71
SOX2-OT-218ENST00000498731 ZNF815PA8K554 130 aa4.38□□□□□ -1.71
SOX2-OT-218ENST00000498731 IGHV3-23P01764 117 aa4.38□□□□□ -1.71
SOX2-OT-218ENST00000498731 WT1-ASQ06250 92 aa4.38□□□□□ -1.71
SOX2-OT-218ENST00000498731 ERCC8Q13216 396 aa4.38□□□□□ -1.71
SOX2-OT-218ENST00000498731 RIGQ13278 110 aa4.38□□□□□ -1.71
SOX2-OT-218ENST00000498731 C3orf22Q8N5N4 141 aa4.38□□□□□ -1.71
SOX2-OT-218ENST00000498731 THAP8Q8NA92 274 aa4.38□□□□□ -1.71
SOX2-OT-218ENST00000498731 Q8TAT8 98 aa4.38□□□□□ -1.71
SOX2-OT-218ENST00000498731 H7C1H1 209 aa4.38□□□□□ -1.71
SOX2-OT-218ENST00000498731 LGALS9O00182 355 aa4.38□□□□□ -1.71
SOX2-OT-218ENST00000498731 NRACQ8N912 160 aa4.38□□□□□ -1.71
SOX2-OT-218ENST00000498731 Q9H8V8 135 aa4.38□□□□□ -1.71
SOX2-OT-218ENST00000498731 IGHV1-3A0A0C4DH29 117 aa4.38□□□□□ -1.71
SOX2-OT-218ENST00000498731 EGR2P11161 476 aaPredicted RBP4.38□□□□□ -1.71
SOX2-OT-218ENST00000498731 ASIPP42127 132 aa4.38□□□□□ -1.71
SOX2-OT-218ENST00000498731 SUB1P53999 127 aaKnown RBP eCLIP4.38□□□□□ -1.71
SOX2-OT-218ENST00000498731 C10orf105Q8TEF2 133 aa4.38□□□□□ -1.71
SOX2-OT-218ENST00000498731 DPH3Q96FX2 82 aa4.38□□□□□ -1.71
SOX2-OT-218ENST00000498731 FMC1Q96HJ9 113 aa4.38□□□□□ -1.71
SOX2-OT-218ENST00000498731 ZNF580Q9UK33 172 aa4.38□□□□□ -1.71
SOX2-OT-218ENST00000498731 NF1P21359 2839 aa4.37□□□□□ -1.71
SOX2-OT-218ENST00000498731 GYPEP15421 78 aa4.37□□□□□ -1.71
SOX2-OT-218ENST00000498731 LY6EQ16553 131 aa4.37□□□□□ -1.71
SOX2-OT-218ENST00000498731 SCGB1D4Q6XE38 83 aa4.37□□□□□ -1.71
SOX2-OT-218ENST00000498731 BRD3OSQ6XYD6 125 aa4.37□□□□□ -1.71
SOX2-OT-218ENST00000498731 CCL19Q99731 98 aa4.37□□□□□ -1.71
SOX2-OT-218ENST00000498731 DPM3Q9P2X0 92 aa4.37□□□□□ -1.71
SOX2-OT-218ENST00000498731 HRNRQ86YZ3 2850 aaPredicted RBP4.37□□□□□ -1.71
SOX2-OT-218ENST00000498731 BUB1B-PAK6H3BSN5 160 aa4.37□□□□□ -1.71
SOX2-OT-218ENST00000498731 OVOL1O14753 267 aa4.37□□□□□ -1.71
SOX2-OT-218ENST00000498731 KRTAP10-9P60411 292 aa4.37□□□□□ -1.71
SOX2-OT-218ENST00000498731 C19orf54Q5BKX5 351 aa4.37□□□□□ -1.71
SOX2-OT-218ENST00000498731 VMO1Q7Z5L0 202 aa4.37□□□□□ -1.71
SOX2-OT-218ENST00000498731 CLEC2BQ92478 149 aa4.37□□□□□ -1.71
SOX2-OT-218ENST00000498731 IGHV3-30P01768 117 aa4.37□□□□□ -1.71
SOX2-OT-218ENST00000498731 IGHV3-30-5P0DP03 117 aa4.37□□□□□ -1.71
SOX2-OT-218ENST00000498731 LYZP61626 148 aa4.37□□□□□ -1.71
SOX2-OT-218ENST00000498731 PRCDQ00LT1 54 aa4.37□□□□□ -1.71
SOX2-OT-218ENST00000498731 ECSCRQ19T08 205 aa4.37□□□□□ -1.71
SOX2-OT-218ENST00000498731 FBXL19-AS1Q494R0 122 aa4.37□□□□□ -1.71
SOX2-OT-218ENST00000498731 PRR25Q96S07 402 aa4.37□□□□□ -1.71
SOX2-OT-218ENST00000498731 MDFIQ99750 246 aa4.37□□□□□ -1.71
SOX2-OT-218ENST00000498731 NOTCH3Q9UM47 2321 aa4.37□□□□□ -1.71
SOX2-OT-218ENST00000498731 A0A0J9YY99 117 aa4.36□□□□□ -1.71
SOX2-OT-218ENST00000498731 SH2D1AO60880 128 aa4.36□□□□□ -1.71
SOX2-OT-218ENST00000498731 ZFP36P26651 326 aaKnown RBP4.36□□□□□ -1.71
SOX2-OT-218ENST00000498731 HLA-DMBP28068 263 aa4.36□□□□□ -1.71
SOX2-OT-218ENST00000498731 CIRBPQ14011 172 aaKnown RBP4.36□□□□□ -1.71
SOX2-OT-218ENST00000498731 ZNF833PQ6ZTB9 187 aa4.36□□□□□ -1.71
SOX2-OT-218ENST00000498731 TMEM219Q86XT9 240 aa4.36□□□□□ -1.71
SOX2-OT-218ENST00000498731 Q8N8P6 123 aa4.36□□□□□ -1.71
SOX2-OT-218ENST00000498731 ADARB2-AS1A8MUL3 147 aa4.36□□□□□ -1.71
SOX2-OT-218ENST00000498731 H7C423 109 aa4.36□□□□□ -1.71
SOX2-OT-218ENST00000498731 IGKV2-40A0A087WW87 121 aaPredicted RBP4.35□□□□□ -1.71
SOX2-OT-218ENST00000498731 IGKV2D-40P01614 121 aaPredicted RBP4.35□□□□□ -1.71
SOX2-OT-218ENST00000498731 HOXB4P17483 251 aaPredicted RBP4.35□□□□□ -1.71
SOX2-OT-218ENST00000498731 DTX2Q86UW9 622 aa4.35□□□□□ -1.71
SOX2-OT-218ENST00000498731 KAAG1Q9UBP8 84 aa4.35□□□□□ -1.71
SOX2-OT-218ENST00000498731 PYGO1Q9Y3Y4 419 aa4.35□□□□□ -1.71
SOX2-OT-218ENST00000498731 IGHV3OR16-13A0A075B7E8 117 aa4.35□□□□□ -1.71
SOX2-OT-218ENST00000498731 IGHV3-74A0A0B4J1X5 117 aa4.35□□□□□ -1.71
SOX2-OT-218ENST00000498731 APRG1Q8IVJ8 170 aa4.35□□□□□ -1.71
SOX2-OT-218ENST00000498731 LINC00526Q96FQ7 95 aa4.35□□□□□ -1.71
SOX2-OT-218ENST00000498731 JPT2Q9H910 190 aa4.35□□□□□ -1.71
SOX2-OT-218ENST00000498731 IGHV3-64A0A075B6Q5 118 aa4.35□□□□□ -1.71
SOX2-OT-218ENST00000498731 TRIAP1O43715 76 aa4.35□□□□□ -1.71
SOX2-OT-218ENST00000498731 IGHV3-33P01772 117 aa4.35□□□□□ -1.71
SOX2-OT-218ENST00000498731 C2orf83Q53S99 150 aa4.35□□□□□ -1.71
SOX2-OT-218ENST00000498731 TRBV7-7A0A0K0K1E9 115 aa4.34□□□□□ -1.71
SOX2-OT-218ENST00000498731 H3BMM0 161 aa4.34□□□□□ -1.71
SOX2-OT-218ENST00000498731 ATP5LO75964 103 aa4.34□□□□□ -1.71
SOX2-OT-218ENST00000498731 TMEM30BQ3MIR4 351 aa4.34□□□□□ -1.71
SOX2-OT-218ENST00000498731 TMEM167AQ8TBQ9 72 aa4.34□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 73 ms