RNA–Protein interactions for RNA: ENST00000498548.1

NR1H3-227, Transcript of nuclear receptor subfamily 1 group H member 3, humanhuman

TSL 3

Gene NR1H3, Length 559 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H3-227ENST00000498548 TM2D2Q9BX73 214 aa10.7□□□□□ -0.7
NR1H3-227ENST00000498548 VAX2Q9UIW0 290 aa10.7□□□□□ -0.7
NR1H3-227ENST00000498548 KLK12Q9UKR0 248 aa10.7□□□□□ -0.7
NR1H3-227ENST00000498548 KIF25-AS1Q9Y6Z4 181 aa10.7□□□□□ -0.7
NR1H3-227ENST00000498548 URGCP-MRPS24S4R325 110 aa10.7□□□□□ -0.7
NR1H3-227ENST00000498548 TRBV20OR9-2A0A075B6H5 130 aa10.69□□□□□ -0.7
NR1H3-227ENST00000498548 TRAV8-3A0A0A6YYJ7 113 aa10.69□□□□□ -0.7
NR1H3-227ENST00000498548 TMEM262E9PQX1 116 aa10.69□□□□□ -0.7
NR1H3-227ENST00000498548 IGLC6P0CF74 106 aa10.69□□□□□ -0.7
NR1H3-227ENST00000498548 FER1L6-AS1Q8NA97 138 aa10.69□□□□□ -0.7
NR1H3-227ENST00000498548 OR10G8Q8NGN5 311 aa10.69□□□□□ -0.7
NR1H3-227ENST00000498548 DNAH8Q96JB1 4490 aa10.68□□□□□ -0.7
NR1H3-227ENST00000498548 MGPP08493 103 aa10.68□□□□□ -0.7
NR1H3-227ENST00000498548 SMIM17P0DL12 118 aa10.68□□□□□ -0.7
NR1H3-227ENST00000498548 BAALCQ8WXS3 180 aa10.68□□□□□ -0.7
NR1H3-227ENST00000498548 A0A087WX48 190 aa10.67□□□□□ -0.7
NR1H3-227ENST00000498548 P01737 135 aa10.67□□□□□ -0.7
NR1H3-227ENST00000498548 RPS20P60866 119 aaKnown RBP10.67□□□□□ -0.7
NR1H3-227ENST00000498548 BLOC1S1P78537 153 aa10.67□□□□□ -0.7
NR1H3-227ENST00000498548 TOR2AQ5JU69 321 aa10.67□□□□□ -0.7
NR1H3-227ENST00000498548 LYPD6BQ8NI32 183 aa10.67□□□□□ -0.7
NR1H3-227ENST00000498548 UBE2WQ96B02 151 aa10.67□□□□□ -0.7
NR1H3-227ENST00000498548 IGKV2D-24A0A075B6R9 120 aa10.66□□□□□ -0.7
NR1H3-227ENST00000498548 TRBV6-8A0A0A6YYG3 113 aa10.66□□□□□ -0.7
NR1H3-227ENST00000498548 SMR3BP02814 79 aaPredicted RBP10.66□□□□□ -0.7
NR1H3-227ENST00000498548 LYZL1Q6UWQ5 148 aa10.66□□□□□ -0.7
NR1H3-227ENST00000498548 NUDT10Q8NFP7 164 aa10.66□□□□□ -0.7
NR1H3-227ENST00000498548 NTN5Q8WTR8 489 aaPredicted RBP10.66□□□□□ -0.7
NR1H3-227ENST00000498548 NUDT11Q96G61 164 aa10.66□□□□□ -0.7
NR1H3-227ENST00000498548 AP1S3Q96PC3 154 aa10.66□□□□□ -0.7
NR1H3-227ENST00000498548 IGLV2-33A0A075B6J2 118 aaPredicted RBP10.65□□□□□ -0.7
NR1H3-227ENST00000498548 KCNIP4Q6PIL6 250 aa10.65□□□□□ -0.7
NR1H3-227ENST00000498548 NTM-AS1Q6ZSK4 140 aa10.65□□□□□ -0.7
NR1H3-227ENST00000498548 OCC1Q8TAD7 63 aa10.65□□□□□ -0.7
NR1H3-227ENST00000498548 SMIM12Q96EX1 92 aa10.65□□□□□ -0.7
NR1H3-227ENST00000498548 FAT1Q14517 4588 aa10.64□□□□□ -0.71
NR1H3-227ENST00000498548 EPM2AB3EWF7 344 aa10.64□□□□□ -0.71
NR1H3-227ENST00000498548 K7EN84 100 aa10.64□□□□□ -0.71
NR1H3-227ENST00000498548 CACNG7P62955 275 aa10.64□□□□□ -0.71
NR1H3-227ENST00000498548 SUMO4Q6EEV6 95 aa10.64□□□□□ -0.71
NR1H3-227ENST00000498548 RNASE7Q9H1E1 156 aaKnown RBP10.64□□□□□ -0.71
NR1H3-227ENST00000498548 FAM30AQ9NZY2 134 aa10.64□□□□□ -0.71
NR1H3-227ENST00000498548 XKRY2A2RUG3 117 aa10.63□□□□□ -0.71
NR1H3-227ENST00000498548 MPV17L2Q567V2 206 aa10.63□□□□□ -0.71
NR1H3-227ENST00000498548 UQCC3Q6UW78 93 aa10.63□□□□□ -0.71
NR1H3-227ENST00000498548 C15orf54Q8N8G6 183 aa10.63□□□□□ -0.71
NR1H3-227ENST00000498548 RMI2Q96E14 147 aa10.63□□□□□ -0.71
NR1H3-227ENST00000498548 CHCHD5Q9BSY4 110 aa10.63□□□□□ -0.71
NR1H3-227ENST00000498548 BIN3Q9NQY0 253 aa10.63□□□□□ -0.71
NR1H3-227ENST00000498548 M0QY20 66 aa10.62□□□□□ -0.71
NR1H3-227ENST00000498548 NTF3P20783 257 aa10.62□□□□□ -0.71
NR1H3-227ENST00000498548 TAGLN2P37802 199 aaKnown RBP10.62□□□□□ -0.71
NR1H3-227ENST00000498548 ELOBQ15370 118 aa10.62□□□□□ -0.71
NR1H3-227ENST00000498548 ENHOQ6UWT2 76 aa10.62□□□□□ -0.71
NR1H3-227ENST00000498548 Q8N976 141 aa10.62□□□□□ -0.71
NR1H3-227ENST00000498548 SREK1IP1Q8N9Q2 155 aaPredicted RBP10.62□□□□□ -0.71
NR1H3-227ENST00000498548 DEFB104AQ8WTQ1 72 aa10.62□□□□□ -0.71
NR1H3-227ENST00000498548 CHCHD7Q9BUK0 85 aa10.62□□□□□ -0.71
NR1H3-227ENST00000498548 F2Z2F3 143 aa10.61□□□□□ -0.71
NR1H3-227ENST00000498548 ANGP03950 147 aaKnown RBP10.61□□□□□ -0.71
NR1H3-227ENST00000498548 GAGE6Q13070 117 aa10.61□□□□□ -0.71
NR1H3-227ENST00000498548 LINC01620Q4KN68 170 aa10.61□□□□□ -0.71
NR1H3-227ENST00000498548 ATRAIDQ6UW56 229 aa10.61□□□□□ -0.71
NR1H3-227ENST00000498548 COX11Q9Y6N1 276 aa10.61□□□□□ -0.71
NR1H3-227ENST00000498548 CEBPGP53567 150 aa10.6□□□□□ -0.71
NR1H3-227ENST00000498548 RPP21Q9H633 154 aaKnown RBP10.6□□□□□ -0.71
NR1H3-227ENST00000498548 TRGC1P0CF51 173 aa10.59□□□□□ -0.71
NR1H3-227ENST00000498548 TWIST1Q15672 202 aa10.59□□□□□ -0.71
NR1H3-227ENST00000498548 Q5VSD8 79 aa10.59□□□□□ -0.71
NR1H3-227ENST00000498548 CLPSL2Q6UWE3 100 aa10.59□□□□□ -0.71
NR1H3-227ENST00000498548 DPH3P1Q9H4G8 78 aa10.59□□□□□ -0.71
NR1H3-227ENST00000498548 TRBV25-1A0A075B6N4 114 aa10.58□□□□□ -0.72
NR1H3-227ENST00000498548 CRPP02741 224 aa10.58□□□□□ -0.72
NR1H3-227ENST00000498548 Q0VG73 95 aa10.58□□□□□ -0.72
NR1H3-227ENST00000498548 TMEM97Q5BJF2 176 aa10.58□□□□□ -0.72
NR1H3-227ENST00000498548 RASL11AQ6T310 242 aa10.58□□□□□ -0.72
NR1H3-227ENST00000498548 FRZBQ92765 325 aa10.58□□□□□ -0.72
NR1H3-227ENST00000498548 TMEM70Q9BUB7 260 aa10.58□□□□□ -0.72
NR1H3-227ENST00000498548 VPS13BQ7Z7G8 4022 aa10.57□□□□□ -0.72
NR1H3-227ENST00000498548 H7C1H1 209 aa10.57□□□□□ -0.72
NR1H3-227ENST00000498548 GATCO43716 136 aaKnown RBP10.57□□□□□ -0.72
NR1H3-227ENST00000498548 CTRLP40313 264 aa10.57□□□□□ -0.72
NR1H3-227ENST00000498548 RBX1P62877 108 aa10.57□□□□□ -0.72
NR1H3-227ENST00000498548 WDR73Q6P4I2 378 aa10.57□□□□□ -0.72
NR1H3-227ENST00000498548 GTSF1Q8WW33 167 aa10.57□□□□□ -0.72
NR1H3-227ENST00000498548 C1orf43Q9BWL3 253 aa10.57□□□□□ -0.72
NR1H3-227ENST00000498548 IGHV1-24A0A0C4DH33 117 aa10.56□□□□□ -0.72
NR1H3-227ENST00000498548 TMEM218A2RU14 115 aa10.56□□□□□ -0.72
NR1H3-227ENST00000498548 TMEM250H0YL14 139 aa10.56□□□□□ -0.72
NR1H3-227ENST00000498548 INAFM2P0DMQ5 153 aa10.56□□□□□ -0.72
NR1H3-227ENST00000498548 FOXA3P55318 350 aaPredicted RBP10.56□□□□□ -0.72
NR1H3-227ENST00000498548 C10orf91Q5T1B1 145 aa10.56□□□□□ -0.72
NR1H3-227ENST00000498548 EIF5A2Q9GZV4 153 aaKnown RBP10.56□□□□□ -0.72
NR1H3-227ENST00000498548 NIT2Q9NQR4 276 aa10.56□□□□□ -0.72
NR1H3-227ENST00000498548 TRAV26-2A0A0B4J265 109 aa10.55□□□□□ -0.72
NR1H3-227ENST00000498548 SRSF3P84103 164 aaKnown RBP10.55□□□□□ -0.72
NR1H3-227ENST00000498548 IQCJQ1A5X6 159 aa10.55□□□□□ -0.72
NR1H3-227ENST00000498548 LINC00269Q8N2A0 174 aa10.55□□□□□ -0.72
NR1H3-227ENST00000498548 PKIAP61925 76 aa10.54□□□□□ -0.72
NR1H3-227ENST00000498548 GATD1Q8NB37 220 aa10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms