RNA–Protein interactions for RNA: ENST00000498463.5

SNX13-212, Transcript of sorting nexin 13, humanhuman

TSL 3

Gene SNX13, Length 687 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-212ENST00000498463 IGKV2-28A0A075B6P5 120 aa4.79□□□□□ -1.64
SNX13-212ENST00000498463 TRAV26-2A0A0B4J265 109 aa4.79□□□□□ -1.64
SNX13-212ENST00000498463 TRBV10-2A0A0K0K1G8 114 aa4.79□□□□□ -1.64
SNX13-212ENST00000498463 A0A1B0GWA3 101 aa4.79□□□□□ -1.64
SNX13-212ENST00000498463 IGKV2D-28P01615 120 aa4.79□□□□□ -1.64
SNX13-212ENST00000498463 PLNP26678 52 aa4.79□□□□□ -1.64
SNX13-212ENST00000498463 FXYD4P59646 89 aa4.79□□□□□ -1.64
SNX13-212ENST00000498463 RPL18Q07020 188 aaKnown RBP4.79□□□□□ -1.64
SNX13-212ENST00000498463 COL16A1Q07092 1604 aaPredicted RBP4.79□□□□□ -1.64
SNX13-212ENST00000498463 ADAMTSL1Q8N6G6 1762 aa4.78□□□□□ -1.64
SNX13-212ENST00000498463 A8MUN3 132 aa4.78□□□□□ -1.64
SNX13-212ENST00000498463 LST1O00453 97 aa4.78□□□□□ -1.64
SNX13-212ENST00000498463 NDUFC1O43677 76 aa4.78□□□□□ -1.64
SNX13-212ENST00000498463 COX6CP09669 75 aa4.78□□□□□ -1.64
SNX13-212ENST00000498463 SPANXN5Q5MJ07 72 aa4.78□□□□□ -1.64
SNX13-212ENST00000498463 C5orf38Q86SI9 138 aa4.78□□□□□ -1.64
SNX13-212ENST00000498463 PRR15Q8IV56 129 aa4.78□□□□□ -1.64
SNX13-212ENST00000498463 EXOC3-AS1Q8N2X6 119 aa4.78□□□□□ -1.64
SNX13-212ENST00000498463 RNF182Q8N6D2 247 aa4.78□□□□□ -1.64
SNX13-212ENST00000498463 RNASE6Q93091 150 aaKnown RBP4.78□□□□□ -1.64
SNX13-212ENST00000498463 DPH3P1Q9H4G8 78 aa4.78□□□□□ -1.64
SNX13-212ENST00000498463 LHFPL6Q9Y693 200 aa4.78□□□□□ -1.64
SNX13-212ENST00000498463 TRPM6Q9BX84 2022 aa4.78□□□□□ -1.64
SNX13-212ENST00000498463 DOCK4Q8N1I0 1966 aa4.78□□□□□ -1.64
SNX13-212ENST00000498463 NLRC5Q86WI3 1866 aa4.77□□□□□ -1.65
SNX13-212ENST00000498463 TRBV7-3A0A075B6L6 115 aa4.77□□□□□ -1.65
SNX13-212ENST00000498463 TRBV7-6A0A0J9YX20 115 aa4.77□□□□□ -1.65
SNX13-212ENST00000498463 K7ERJ3 54 aa4.77□□□□□ -1.65
SNX13-212ENST00000498463 SPINK4O60575 86 aa4.77□□□□□ -1.65
SNX13-212ENST00000498463 ARL14EPLP0DKL9 152 aa4.77□□□□□ -1.65
SNX13-212ENST00000498463 UBE2D1P51668 147 aa4.77□□□□□ -1.65
SNX13-212ENST00000498463 TMEM155Q4W5P6 130 aa4.77□□□□□ -1.65
SNX13-212ENST00000498463 DAND5Q8N907 189 aa4.77□□□□□ -1.65
SNX13-212ENST00000498463 TP73-AS1Q9UF72 201 aa4.77□□□□□ -1.65
SNX13-212ENST00000498463 TRAV16A0A0A6YYK6 109 aaPredicted RBP4.76□□□□□ -1.65
SNX13-212ENST00000498463 LINC01549A6NIU2 74 aa4.76□□□□□ -1.65
SNX13-212ENST00000498463 HIGD1CA8MV81 97 aa4.76□□□□□ -1.65
SNX13-212ENST00000498463 FKBP2P26885 142 aaKnown RBP4.76□□□□□ -1.65
SNX13-212ENST00000498463 FCER1GP30273 86 aa4.76□□□□□ -1.65
SNX13-212ENST00000498463 HIST1H4AP62805 103 aaKnown RBP4.76□□□□□ -1.65
SNX13-212ENST00000498463 LINC00167Q96N53 147 aa4.76□□□□□ -1.65
SNX13-212ENST00000498463 UPK3BQ9BT76 320 aa4.76□□□□□ -1.65
SNX13-212ENST00000498463 NOTCH3Q9UM47 2321 aa4.76□□□□□ -1.65
SNX13-212ENST00000498463 PRRC2AP48634 2157 aaKnown RBP4.75□□□□□ -1.65
SNX13-212ENST00000498463 SCN3AQ9NY46 2000 aa4.75□□□□□ -1.65
SNX13-212ENST00000498463 EXPH5Q8NEV8 1989 aa4.75□□□□□ -1.65
SNX13-212ENST00000498463 hADV29S1A0JD25 119 aa4.75□□□□□ -1.65
SNX13-212ENST00000498463 NDUFB3O43676 98 aa4.75□□□□□ -1.65
SNX13-212ENST00000498463 TCL1BO95988 128 aa4.75□□□□□ -1.65
SNX13-212ENST00000498463 FKBP1AP62942 108 aaKnown RBP4.75□□□□□ -1.65
SNX13-212ENST00000498463 KISS1Q15726 138 aa4.75□□□□□ -1.65
SNX13-212ENST00000498463 LINC00305Q7Z4B0 112 aa4.75□□□□□ -1.65
SNX13-212ENST00000498463 NDUFA11Q86Y39 141 aa4.75□□□□□ -1.65
SNX13-212ENST00000498463 LINC00311Q8N616 119 aa4.75□□□□□ -1.65
SNX13-212ENST00000498463 BRK1Q8WUW1 75 aa4.75□□□□□ -1.65
SNX13-212ENST00000498463 IGF2BP2-AS1Q96M15 143 aa4.75□□□□□ -1.65
SNX13-212ENST00000498463 PRO1854Q9UHT4 67 aa4.75□□□□□ -1.65
SNX13-212ENST00000498463 MDC1Q14676 2089 aaKnown RBP4.75□□□□□ -1.65
SNX13-212ENST00000498463 DOCK11Q5JSL3 2073 aa4.74□□□□□ -1.65
SNX13-212ENST00000498463 DSCAML1Q8TD84 2053 aa4.74□□□□□ -1.65
SNX13-212ENST00000498463 FANCMQ8IYD8 2048 aa4.74□□□□□ -1.65
SNX13-212ENST00000498463 LRCOL1A6NCL2 159 aa4.74□□□□□ -1.65
SNX13-212ENST00000498463 CCL16O15467 120 aa4.74□□□□□ -1.65
SNX13-212ENST00000498463 PGLYRP1O75594 196 aaPredicted RBP4.74□□□□□ -1.65
SNX13-212ENST00000498463 LINC00315P59091 139 aa4.74□□□□□ -1.65
SNX13-212ENST00000498463 KLK5Q9Y337 293 aaPredicted RBP4.74□□□□□ -1.65
SNX13-212ENST00000498463 PTPRDP23468 1912 aa4.74□□□□□ -1.65
SNX13-212ENST00000498463 COL27A1Q8IZC6 1860 aaPredicted RBP4.73□□□□□ -1.65
SNX13-212ENST00000498463 ARID1AO14497 2285 aa4.73□□□□□ -1.65
SNX13-212ENST00000498463 A0A1B0GUT8 65 aa4.73□□□□□ -1.65
SNX13-212ENST00000498463 LINC01546A6NGU7 62 aa4.73□□□□□ -1.65
SNX13-212ENST00000498463 IAPPP10997 89 aa4.73□□□□□ -1.65
SNX13-212ENST00000498463 SLC25A16P16260 332 aa4.73□□□□□ -1.65
SNX13-212ENST00000498463 LGALS3P17931 250 aaKnown RBP4.73□□□□□ -1.65
SNX13-212ENST00000498463 IFI27P40305 119 aaPredicted RBP4.73□□□□□ -1.65
SNX13-212ENST00000498463 FXYD3Q14802 87 aa4.73□□□□□ -1.65
SNX13-212ENST00000498463 S100A7L2Q5SY68 101 aa4.73□□□□□ -1.65
SNX13-212ENST00000498463 C2orf82Q6UX34 121 aa4.73□□□□□ -1.65
SNX13-212ENST00000498463 SDIM1Q6ZPB5 146 aa4.73□□□□□ -1.65
SNX13-212ENST00000498463 KIAA2026Q5HYC2 2103 aa4.73□□□□□ -1.65
SNX13-212ENST00000498463 IGLV2-18A0A075B6J9 118 aa4.72□□□□□ -1.65
SNX13-212ENST00000498463 IGHV1-58A0A0C4DH39 117 aa4.72□□□□□ -1.65
SNX13-212ENST00000498463 TRBV30A0A0K0K1B3 111 aa4.72□□□□□ -1.65
SNX13-212ENST00000498463 C19orf71A6NCJ1 209 aa4.72□□□□□ -1.65
SNX13-212ENST00000498463 UBE2L6O14933 153 aa4.72□□□□□ -1.65
SNX13-212ENST00000498463 CCL3P10147 92 aa4.72□□□□□ -1.65
SNX13-212ENST00000498463 KRTAP25-1Q3LHN0 102 aa4.72□□□□□ -1.65
SNX13-212ENST00000498463 OTORQ9NRC9 128 aa4.72□□□□□ -1.65
SNX13-212ENST00000498463 HHLA3Q9XRX5 114 aa4.72□□□□□ -1.65
SNX13-212ENST00000498463 NCOA6Q14686 2063 aaPredicted RBP4.72□□□□□ -1.65
SNX13-212ENST00000498463 DOCK3Q8IZD9 2030 aa4.72□□□□□ -1.65
SNX13-212ENST00000498463 THADAQ6YHU6 1953 aa4.71□□□□□ -1.66
SNX13-212ENST00000498463 MGAMO43451 1857 aa4.71□□□□□ -1.66
SNX13-212ENST00000498463 TRAV12-1A0A0B4J245 112 aa4.71□□□□□ -1.66
SNX13-212ENST00000498463 EFNA4P52798 201 aa4.71□□□□□ -1.66
SNX13-212ENST00000498463 GDF5OSQ5U4N7 250 aa4.71□□□□□ -1.66
SNX13-212ENST00000498463 ZNF818PQ6ZRF7 136 aa4.71□□□□□ -1.66
SNX13-212ENST00000498463 C3orf56Q8N813 242 aa4.71□□□□□ -1.66
SNX13-212ENST00000498463 Q8NAQ8 132 aa4.71□□□□□ -1.66
SNX13-212ENST00000498463 MUC7Q8TAX7 377 aa4.71□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms