RNA–Protein interactions for RNA: ENST00000498223.3

CTTN-208, Transcript of cortactin, humanhuman

TSL 3

Gene CTTN, Length 523 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTTN-208ENST00000498223 SMCO4Q9NRQ5 59 aa7.98□□□□□ -1.13
CTTN-208ENST00000498223 TNFRSF18Q9Y5U5 241 aa7.98□□□□□ -1.13
CTTN-208ENST00000498223 TRBV10-1A0A0K0K1A3 114 aa7.97□□□□□ -1.13
CTTN-208ENST00000498223 ATP6V1G1O75348 118 aa7.97□□□□□ -1.13
CTTN-208ENST00000498223 RAB4AP20338 218 aa7.97□□□□□ -1.13
CTTN-208ENST00000498223 FAM104BQ5XKR9 115 aa7.97□□□□□ -1.13
CTTN-208ENST00000498223 SH2D6Q7Z4S9 175 aa7.97□□□□□ -1.13
CTTN-208ENST00000498223 SREK1IP1Q8N9Q2 155 aaPredicted RBP7.97□□□□□ -1.13
CTTN-208ENST00000498223 TGIF2-C20orf24A0A0A6YYL0 155 aa7.96□□□□□ -1.14
CTTN-208ENST00000498223 M0QY20 66 aa7.96□□□□□ -1.14
CTTN-208ENST00000498223 S100A1P23297 94 aa7.96□□□□□ -1.14
CTTN-208ENST00000498223 CCL18P55774 89 aa7.96□□□□□ -1.14
CTTN-208ENST00000498223 MRPL51Q4U2R6 128 aaKnown RBP7.96□□□□□ -1.14
CTTN-208ENST00000498223 CBLN2Q8IUK8 224 aa7.96□□□□□ -1.14
CTTN-208ENST00000498223 GATD1Q8NB37 220 aa7.96□□□□□ -1.14
CTTN-208ENST00000498223 NEXN-AS1Q8NBZ9 246 aa7.96□□□□□ -1.14
CTTN-208ENST00000498223 ATP6V0E2Q8NHE4 81 aa7.96□□□□□ -1.14
CTTN-208ENST00000498223 MRAP2Q96G30 205 aa7.96□□□□□ -1.14
CTTN-208ENST00000498223 RNF185Q96GF1 192 aa7.96□□□□□ -1.14
CTTN-208ENST00000498223 NIT2Q9NQR4 276 aa7.96□□□□□ -1.14
CTTN-208ENST00000498223 Q9UF83 564 aa7.96□□□□□ -1.14
CTTN-208ENST00000498223 TRBV7-3A0A075B6L6 115 aa7.95□□□□□ -1.14
CTTN-208ENST00000498223 SMKR1H3BMG3 65 aa7.95□□□□□ -1.14
CTTN-208ENST00000498223 NCR2O95944 276 aa7.95□□□□□ -1.14
CTTN-208ENST00000498223 CKS2P33552 79 aa7.95□□□□□ -1.14
CTTN-208ENST00000498223 ELOBQ15370 118 aa7.95□□□□□ -1.14
CTTN-208ENST00000498223 COX19Q49B96 90 aa7.95□□□□□ -1.14
CTTN-208ENST00000498223 OR10J3Q5JRS4 329 aa7.95□□□□□ -1.14
CTTN-208ENST00000498223 FRZBQ92765 325 aa7.95□□□□□ -1.14
CTTN-208ENST00000498223 DNAJC30Q96LL9 226 aa7.95□□□□□ -1.14
CTTN-208ENST00000498223 HLA-DQA1P01909 254 aa7.94□□□□□ -1.14
CTTN-208ENST00000498223 RPL39LQ96EH5 51 aaKnown RBP7.94□□□□□ -1.14
CTTN-208ENST00000498223 IGHV3-38A0A0C4DH36 116 aa7.93□□□□□ -1.14
CTTN-208ENST00000498223 LY6G6CO95867 125 aa7.93□□□□□ -1.14
CTTN-208ENST00000498223 APCSP02743 223 aa7.93□□□□□ -1.14
CTTN-208ENST00000498223 TMEM136Q6ZRR5 245 aa7.93□□□□□ -1.14
CTTN-208ENST00000498223 GNB1LQ9BYB4 327 aa7.93□□□□□ -1.14
CTTN-208ENST00000498223 ST20Q9HBF5 79 aa7.93□□□□□ -1.14
CTTN-208ENST00000498223 TRBV24-1A0A075B6N3 115 aa7.92□□□□□ -1.14
CTTN-208ENST00000498223 D6R8Y8 96 aa7.92□□□□□ -1.14
CTTN-208ENST00000498223 SCO1O75880 301 aa7.92□□□□□ -1.14
CTTN-208ENST00000498223 GAS8-AS1O95177 125 aa7.92□□□□□ -1.14
CTTN-208ENST00000498223 PPP1R17O96001 155 aa7.92□□□□□ -1.14
CTTN-208ENST00000498223 PPBPP02775 128 aa7.92□□□□□ -1.14
CTTN-208ENST00000498223 MT-ND6P03923 174 aa7.92□□□□□ -1.14
CTTN-208ENST00000498223 UBE2D3P61077 147 aa7.92□□□□□ -1.14
CTTN-208ENST00000498223 UBE2D2P62837 147 aa7.92□□□□□ -1.14
CTTN-208ENST00000498223 FABP9Q0Z7S8 132 aa7.92□□□□□ -1.14
CTTN-208ENST00000498223 ESRGQ1W209 222 aa7.92□□□□□ -1.14
CTTN-208ENST00000498223 LYPD5Q6UWN5 251 aa7.92□□□□□ -1.14
CTTN-208ENST00000498223 PRELID3AQ96N28 172 aa7.92□□□□□ -1.14
CTTN-208ENST00000498223 GTSF1LQ9H1H1 148 aa7.92□□□□□ -1.14
CTTN-208ENST00000498223 TRAPPC1Q9Y5R8 145 aa7.92□□□□□ -1.14
CTTN-208ENST00000498223 PMCHP20382 165 aa7.91□□□□□ -1.14
CTTN-208ENST00000498223 RPS10P46783 165 aaKnown RBP7.91□□□□□ -1.14
CTTN-208ENST00000498223 KIAA1644Q3SXP7 199 aa7.91□□□□□ -1.14
CTTN-208ENST00000498223 DAZ4Q86SG3 579 aaKnown RBP7.91□□□□□ -1.14
CTTN-208ENST00000498223 ORMDL3Q8N138 153 aa7.91□□□□□ -1.14
CTTN-208ENST00000498223 DEFB104AQ8WTQ1 72 aa7.91□□□□□ -1.14
CTTN-208ENST00000498223 MRPL18Q9H0U6 180 aaKnown RBP7.91□□□□□ -1.14
CTTN-208ENST00000498223 DAZ3Q9NR90 486 aaKnown RBP7.91□□□□□ -1.14
CTTN-208ENST00000498223 LINC00588Q9Y4M8 146 aa7.91□□□□□ -1.14
CTTN-208ENST00000498223 EPPK1P58107 5090 aaKnown RBP7.91□□□□□ -1.14
CTTN-208ENST00000498223 TRAV8-6A0A0B4J262 113 aa7.9□□□□□ -1.14
CTTN-208ENST00000498223 SDHAF1A6NFY7 115 aa7.9□□□□□ -1.14
CTTN-208ENST00000498223 TNFRSF6BO95407 300 aa7.9□□□□□ -1.14
CTTN-208ENST00000498223 LINC00694P0DN24 101 aa7.9□□□□□ -1.14
CTTN-208ENST00000498223 LGALS9CQ6DKI2 356 aa7.9□□□□□ -1.14
CTTN-208ENST00000498223 NPYP01303 97 aa7.89□□□□□ -1.15
CTTN-208ENST00000498223 COTL1Q14019 142 aa7.89□□□□□ -1.15
CTTN-208ENST00000498223 TMEM97Q5BJF2 176 aa7.89□□□□□ -1.15
CTTN-208ENST00000498223 NRACQ8N912 160 aa7.89□□□□□ -1.15
CTTN-208ENST00000498223 MRPS16Q9Y3D3 137 aaKnown RBP7.89□□□□□ -1.15
CTTN-208ENST00000498223 TRBV6-5A0A0K0K1A5 114 aa7.88□□□□□ -1.15
CTTN-208ENST00000498223 I3L3M4 83 aa7.88□□□□□ -1.15
CTTN-208ENST00000498223 VCYO14598 125 aa7.88□□□□□ -1.15
CTTN-208ENST00000498223 TIRAPP58753 221 aa7.88□□□□□ -1.15
CTTN-208ENST00000498223 SUMO2P61956 95 aaKnown RBP7.88□□□□□ -1.15
CTTN-208ENST00000498223 LELP1Q5T871 98 aa7.88□□□□□ -1.15
CTTN-208ENST00000498223 LINC00476Q8WZB0 136 aa7.88□□□□□ -1.15
CTTN-208ENST00000498223 YPEL4Q96NS1 127 aa7.88□□□□□ -1.15
CTTN-208ENST00000498223 C20orf78Q9BR46 151 aa7.88□□□□□ -1.15
CTTN-208ENST00000498223 MAP1LC3AQ9H492 121 aa7.88□□□□□ -1.15
CTTN-208ENST00000498223 ALMS1Q8TCU4 4167 aa7.88□□□□□ -1.15
CTTN-208ENST00000498223 TRBV25-1A0A075B6N4 114 aa7.87□□□□□ -1.15
CTTN-208ENST00000498223 IGHV1-24A0A0C4DH33 117 aa7.87□□□□□ -1.15
CTTN-208ENST00000498223 LOC389332A0A1B0GUA5 103 aa7.87□□□□□ -1.15
CTTN-208ENST00000498223 PHOX2AO14813 284 aa7.87□□□□□ -1.15
CTTN-208ENST00000498223 FCER1GP30273 86 aa7.87□□□□□ -1.15
CTTN-208ENST00000498223 KIR2DL4Q99706 377 aa7.87□□□□□ -1.15
CTTN-208ENST00000498223 CHCHD5Q9BSY4 110 aa7.87□□□□□ -1.15
CTTN-208ENST00000498223 TMEM70Q9BUB7 260 aa7.87□□□□□ -1.15
CTTN-208ENST00000498223 LAMTOR2Q9Y2Q5 125 aa7.87□□□□□ -1.15
CTTN-208ENST00000498223 BIRC6Q9NR09 4857 aa7.87□□□□□ -1.15
CTTN-208ENST00000498223 PLECQ15149 4684 aaKnown RBP7.86□□□□□ -1.15
CTTN-208ENST00000498223 TRBV6-8A0A0A6YYG3 113 aa7.86□□□□□ -1.15
CTTN-208ENST00000498223 TMEM262E9PQX1 116 aa7.86□□□□□ -1.15
CTTN-208ENST00000498223 SIVA1O15304 175 aa7.86□□□□□ -1.15
CTTN-208ENST00000498223 AMTP48728 403 aa7.86□□□□□ -1.15
CTTN-208ENST00000498223 Q9H8V8 135 aa7.86□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 101.6 ms