RNA–Protein interactions for RNA: ENST00000498077.6

XRN1-214, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 5

Gene XRN1, Length 5,600 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-214ENST00000498077 LCN2P80188 198 aa0.95□□□□□ -2.26
XRN1-214ENST00000498077 ZNF345Q14585 488 aa0.95□□□□□ -2.26
XRN1-214ENST00000498077 Q5BKY6 102 aa0.95□□□□□ -2.26
XRN1-214ENST00000498077 PIP5KL1Q5T9C9 394 aa0.95□□□□□ -2.26
XRN1-214ENST00000498077 TMED4Q7Z7H5 227 aa0.95□□□□□ -2.26
XRN1-214ENST00000498077 FAM58AQ8N1B3 248 aa0.95□□□□□ -2.26
XRN1-214ENST00000498077 C10orf111Q8N326 155 aa0.95□□□□□ -2.26
XRN1-214ENST00000498077 PMCHL2Q9BQD1 86 aa0.95□□□□□ -2.26
XRN1-214ENST00000498077 Q9UF83 564 aa0.95□□□□□ -2.26
XRN1-214ENST00000498077 R4GMQ9 66 aa0.95□□□□□ -2.26
XRN1-214ENST00000498077 FOCADQ5VW36 1801 aa0.95□□□□□ -2.26
XRN1-214ENST00000498077 TINCRA0A1B0GVN0 87 aa0.95□□□□□ -2.26
XRN1-214ENST00000498077 TSPAN11A1L157 253 aa0.95□□□□□ -2.26
XRN1-214ENST00000498077 PRKAB2O43741 272 aa0.95□□□□□ -2.26
XRN1-214ENST00000498077 TIMM8AO60220 97 aaPredicted RBP0.95□□□□□ -2.26
XRN1-214ENST00000498077 MBPP02686 304 aaPredicted RBP0.95□□□□□ -2.26
XRN1-214ENST00000498077 PROK1P58294 105 aa0.95□□□□□ -2.26
XRN1-214ENST00000498077 KRTAP10-2P60368 255 aa0.95□□□□□ -2.26
XRN1-214ENST00000498077 KRTAP25-1Q3LHN0 102 aa0.95□□□□□ -2.26
XRN1-214ENST00000498077 TMEM42Q69YG0 159 aa0.95□□□□□ -2.26
XRN1-214ENST00000498077 SPATA8Q6RVD6 105 aa0.95□□□□□ -2.26
XRN1-214ENST00000498077 VMO1Q7Z5L0 202 aa0.95□□□□□ -2.26
XRN1-214ENST00000498077 PRNTQ86SH4 94 aa0.95□□□□□ -2.26
XRN1-214ENST00000498077 PPP1R27Q86WC6 154 aa0.95□□□□□ -2.26
XRN1-214ENST00000498077 GVQW1Q8N7I0 195 aa0.95□□□□□ -2.26
XRN1-214ENST00000498077 ZNF563Q8TA94 476 aa0.95□□□□□ -2.26
XRN1-214ENST00000498077 RNASE8Q8TDE3 154 aaKnown RBP0.95□□□□□ -2.26
XRN1-214ENST00000498077 SAP25Q8TEE9 199 aa0.95□□□□□ -2.26
XRN1-214ENST00000498077 ROPN1LQ96C74 230 aa0.95□□□□□ -2.26
XRN1-214ENST00000498077 MCEEQ96PE7 176 aa0.95□□□□□ -2.26
XRN1-214ENST00000498077 GEMIN7Q9H840 131 aaKnown RBP0.95□□□□□ -2.26
XRN1-214ENST00000498077 FBXL12Q9NXK8 326 aa0.95□□□□□ -2.26
XRN1-214ENST00000498077 ANK1P16157 1881 aa0.95□□□□□ -2.26
XRN1-214ENST00000498077 DOCK3Q8IZD9 2030 aa0.95□□□□□ -2.26
XRN1-214ENST00000498077 DOCK6Q96HP0 2047 aa0.95□□□□□ -2.26
XRN1-214ENST00000498077 LAMA4Q16363 1823 aa0.95□□□□□ -2.26
XRN1-214ENST00000498077 A0A1W2PNU3 283 aaPredicted RBP0.95□□□□□ -2.26
XRN1-214ENST00000498077 CXCL14O95715 111 aa0.95□□□□□ -2.26
XRN1-214ENST00000498077 TXNP10599 105 aaKnown RBP0.95□□□□□ -2.26
XRN1-214ENST00000498077 DLX6P56179 175 aa0.95□□□□□ -2.26
XRN1-214ENST00000498077 DYNLT1P63172 113 aa0.95□□□□□ -2.26
XRN1-214ENST00000498077 ATP11AUNQ6ZP68 121 aa0.95□□□□□ -2.26
XRN1-214ENST00000498077 CCL19Q99731 98 aa0.95□□□□□ -2.26
XRN1-214ENST00000498077 LINC00470Q9BZP3 86 aa0.95□□□□□ -2.26
XRN1-214ENST00000498077 SPANXB1Q9NS25 103 aaPredicted RBP0.95□□□□□ -2.26
XRN1-214ENST00000498077 PLAC8Q9NZF1 115 aa0.95□□□□□ -2.26
XRN1-214ENST00000498077 CCDC167Q9P0B6 97 aa0.95□□□□□ -2.26
XRN1-214ENST00000498077 FAT4Q6V0I7 4981 aa0.95□□□□□ -2.26
XRN1-214ENST00000498077 DNAH7Q8WXX0 4024 aa0.95□□□□□ -2.26
XRN1-214ENST00000498077 CST7O76096 145 aa0.95□□□□□ -2.26
XRN1-214ENST00000498077 FHITP49789 147 aa0.95□□□□□ -2.26
XRN1-214ENST00000498077 RPS20P60866 119 aaKnown RBP0.95□□□□□ -2.26
XRN1-214ENST00000498077 OR1C1Q15619 314 aa0.95□□□□□ -2.26
XRN1-214ENST00000498077 FAM229BQ4G0N7 80 aa0.95□□□□□ -2.26
XRN1-214ENST00000498077 PCOTHQ58A44 107 aa0.95□□□□□ -2.26
XRN1-214ENST00000498077 SYPL2Q5VXT5 272 aa0.95□□□□□ -2.26
XRN1-214ENST00000498077 KRTAP5-7Q6L8G8 165 aa0.95□□□□□ -2.26
XRN1-214ENST00000498077 SCIMPQ6UWF3 145 aa0.95□□□□□ -2.26
XRN1-214ENST00000498077 TVP23CQ96ET8 276 aa0.95□□□□□ -2.26
XRN1-214ENST00000498077 RNF185Q96GF1 192 aa0.95□□□□□ -2.26
XRN1-214ENST00000498077 Q9HAA7 133 aa0.95□□□□□ -2.26
XRN1-214ENST00000498077 GREB1LQ9C091 1923 aaPredicted RBP0.94□□□□□ -2.26
XRN1-214ENST00000498077 IGHV3-38A0A0C4DH36 116 aa0.94□□□□□ -2.26
XRN1-214ENST00000498077 EPM2AB3EWF7 344 aa0.94□□□□□ -2.26
XRN1-214ENST00000498077 GABARAPH6UMI1 98 aa0.94□□□□□ -2.26
XRN1-214ENST00000498077 M0R2N4 97 aa0.94□□□□□ -2.26
XRN1-214ENST00000498077 CSTAP01040 98 aa0.94□□□□□ -2.26
XRN1-214ENST00000498077 CD164Q04900 197 aa0.94□□□□□ -2.26
XRN1-214ENST00000498077 Q0VFX4 171 aa0.94□□□□□ -2.26
XRN1-214ENST00000498077 TMEM14EPQ6UXP3 125 aa0.94□□□□□ -2.26
XRN1-214ENST00000498077 OR51H1Q8NH63 302 aa0.94□□□□□ -2.26
XRN1-214ENST00000498077 YPEL2Q96QA6 119 aa0.94□□□□□ -2.26
XRN1-214ENST00000498077 OCR1Q9BZK8 76 aa0.94□□□□□ -2.26
XRN1-214ENST00000498077 C19orf12Q9NSK7 152 aa0.94□□□□□ -2.26
XRN1-214ENST00000498077 HCFC1P51610 2035 aa0.94□□□□□ -2.26
XRN1-214ENST00000498077 CHTF8P0CG12 524 aa0.94□□□□□ -2.26
XRN1-214ENST00000498077 KRTAP10-4P60372 401 aaPredicted RBP0.94□□□□□ -2.26
XRN1-214ENST00000498077 ERVS71-1P61550 626 aa0.94□□□□□ -2.26
XRN1-214ENST00000498077 RANP62826 216 aaKnown RBP0.94□□□□□ -2.26
XRN1-214ENST00000498077 RPS28P62857 69 aaKnown RBP0.94□□□□□ -2.26
XRN1-214ENST00000498077 HTD2P86397 168 aa0.94□□□□□ -2.26
XRN1-214ENST00000498077 MIC13Q5XKP0 118 aa0.94□□□□□ -2.26
XRN1-214ENST00000498077 NEXN-AS1Q8NBZ9 246 aa0.94□□□□□ -2.26
XRN1-214ENST00000498077 IGLV3-9A0A075B6K5 115 aa0.94□□□□□ -2.26
XRN1-214ENST00000498077 A0A1B0GX51 115 aa0.94□□□□□ -2.26
XRN1-214ENST00000498077 ERC2-IT1O76042 136 aa0.94□□□□□ -2.26
XRN1-214ENST00000498077 ABHD2P08910 425 aa0.94□□□□□ -2.26
XRN1-214ENST00000498077 TPPP2P59282 170 aa0.94□□□□□ -2.26
XRN1-214ENST00000498077 BEX3Q00994 111 aa0.94□□□□□ -2.26
XRN1-214ENST00000498077 LIN52Q52LA3 116 aa0.94□□□□□ -2.26
XRN1-214ENST00000498077 SBSPONQ8IVN8 264 aa0.94□□□□□ -2.26
XRN1-214ENST00000498077 SMR3AQ99954 134 aa0.94□□□□□ -2.26
XRN1-214ENST00000498077 PPDPFQ9H3Y8 114 aa0.94□□□□□ -2.26
XRN1-214ENST00000498077 LIN28AQ9H9Z2 209 aaKnown RBP0.94□□□□□ -2.26
XRN1-214ENST00000498077 RANBP2P49792 3224 aaKnown RBP0.94□□□□□ -2.26
XRN1-214ENST00000498077 TMEM131Q92545 1883 aa0.94□□□□□ -2.26
XRN1-214ENST00000498077 IGHG1P01857 330 aa0.94□□□□□ -2.26
XRN1-214ENST00000498077 LINC00614P0C842 121 aa0.94□□□□□ -2.26
XRN1-214ENST00000498077 SEC61BP60468 96 aaKnown RBP0.94□□□□□ -2.26
XRN1-214ENST00000498077 LRBAP50851 2863 aa0.93□□□□□ -2.26
Retrieved 100 of 20,778 RNA–protein pairs in 82.1 ms