RNA–Protein interactions for RNA: ENST00000497722.2

PSPC1-205, Transcript of paraspeckle component 1, humanhuman

TSL 2

Gene PSPC1, Length 448 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-205ENST00000497722 GUCA1AP43080 201 aaPredicted RBP0.05□□□□□ -2.4
PSPC1-205ENST00000497722 INSL4Q14641 139 aa0.05□□□□□ -2.4
PSPC1-205ENST00000497722 ZNF818PQ6ZRF7 136 aa0.05□□□□□ -2.4
PSPC1-205ENST00000497722 TSTD1Q8NFU3 115 aa0.05□□□□□ -2.4
PSPC1-205ENST00000497722 TCEAL4Q96EI5 215 aa0.05□□□□□ -2.4
PSPC1-205ENST00000497722 TPT1P8Q9HAU6 139 aa0.05□□□□□ -2.4
PSPC1-205ENST00000497722 RPRMQ9NS64 109 aa0.05□□□□□ -2.4
PSPC1-205ENST00000497722 POLQO75417 2590 aa0.05□□□□□ -2.4
PSPC1-205ENST00000497722 MYO7AQ13402 2215 aa0.05□□□□□ -2.4
PSPC1-205ENST00000497722 ZFYVE26Q68DK2 2539 aa0.05□□□□□ -2.4
PSPC1-205ENST00000497722 PRDM2Q13029 1718 aa0.04□□□□□ -2.4
PSPC1-205ENST00000497722 FSIP2Q5CZC0 6907 aa0.04□□□□□ -2.4
PSPC1-205ENST00000497722 ZNF518AQ6AHZ1 1483 aa0.04□□□□□ -2.4
PSPC1-205ENST00000497722 IFT140Q96RY7 1462 aa0.04□□□□□ -2.4
PSPC1-205ENST00000497722 FOCADQ5VW36 1801 aa0.04□□□□□ -2.4
PSPC1-205ENST00000497722 CADP27708 2225 aa0.04□□□□□ -2.4
PSPC1-205ENST00000497722 TMEM14DPA8MWL7 114 aa0.04□□□□□ -2.4
PSPC1-205ENST00000497722 IL5P05113 134 aa0.04□□□□□ -2.4
PSPC1-205ENST00000497722 NMBP08949 121 aa0.04□□□□□ -2.4
PSPC1-205ENST00000497722 PIPP12273 146 aaPredicted RBP0.04□□□□□ -2.4
PSPC1-205ENST00000497722 ACYP2P14621 99 aa0.04□□□□□ -2.4
PSPC1-205ENST00000497722 CBLN1P23435 193 aa0.04□□□□□ -2.4
PSPC1-205ENST00000497722 EDDM3BP56851 147 aa0.04□□□□□ -2.4
PSPC1-205ENST00000497722 COPZ1P61923 177 aa0.04□□□□□ -2.4
PSPC1-205ENST00000497722 Q5VV11 94 aa0.04□□□□□ -2.4
PSPC1-205ENST00000497722 PFDN5Q99471 154 aa0.04□□□□□ -2.4
PSPC1-205ENST00000497722 WFDC6Q9BQY6 131 aa0.04□□□□□ -2.4
PSPC1-205ENST00000497722 PSMG3Q9BT73 122 aaPredicted RBP0.04□□□□□ -2.4
PSPC1-205ENST00000497722 SCP2D1Q9UJQ7 156 aa0.04□□□□□ -2.4
PSPC1-205ENST00000497722 NCOR2Q9Y618 2525 aa0.04□□□□□ -2.4
PSPC1-205ENST00000497722 BCL9LQ86UU0 1499 aa0.03□□□□□ -2.4
PSPC1-205ENST00000497722 IGF2RP11717 2491 aa0.03□□□□□ -2.4
PSPC1-205ENST00000497722 TRGV1A0A0A0MS02 117 aa0.03□□□□□ -2.4
PSPC1-205ENST00000497722 NDUFB6O95139 128 aa0.03□□□□□ -2.4
PSPC1-205ENST00000497722 UBE2G1P62253 170 aa0.03□□□□□ -2.4
PSPC1-205ENST00000497722 Q6ZRX8 168 aa0.03□□□□□ -2.4
PSPC1-205ENST00000497722 SPTSSAQ969W0 71 aa0.03□□□□□ -2.4
PSPC1-205ENST00000497722 DPH3Q96FX2 82 aa0.03□□□□□ -2.4
PSPC1-205ENST00000497722 CCDC167Q9P0B6 97 aa0.03□□□□□ -2.4
PSPC1-205ENST00000497722 U3KQA8 63 aa0.03□□□□□ -2.4
PSPC1-205ENST00000497722 PATJQ8NI35 1801 aa0.03□□□□□ -2.4
PSPC1-205ENST00000497722 CASKIN1Q8WXD9 1431 aa0.03□□□□□ -2.41
PSPC1-205ENST00000497722 CFTRP13569 1480 aa0.03□□□□□ -2.41
PSPC1-205ENST00000497722 MYH9P35579 1960 aaKnown RBP0.03□□□□□ -2.41
PSPC1-205ENST00000497722 ZMYM4Q5VZL5 1548 aa0.03□□□□□ -2.41
PSPC1-205ENST00000497722 DOCK11Q5JSL3 2073 aa0.02□□□□□ -2.41
PSPC1-205ENST00000497722 DMBT1Q9UGM3 2413 aaPredicted RBP0.02□□□□□ -2.41
PSPC1-205ENST00000497722 TRBV10-3A0A0K0K1G6 114 aa0.02□□□□□ -2.41
PSPC1-205ENST00000497722 SPAARA0A1B0GVQ0 90 aa0.02□□□□□ -2.41
PSPC1-205ENST00000497722 G3V318 75 aa0.02□□□□□ -2.41
PSPC1-205ENST00000497722 APOC4-APOC2K7ER74 178 aa0.02□□□□□ -2.41
PSPC1-205ENST00000497722 CCL8P80075 99 aa0.02□□□□□ -2.41
PSPC1-205ENST00000497722 S100A12P80511 92 aa0.02□□□□□ -2.41
PSPC1-205ENST00000497722 KCNRGQ8N5I3 272 aa0.02□□□□□ -2.41
PSPC1-205ENST00000497722 CELSR2Q9HCU4 2923 aa0.02□□□□□ -2.41
PSPC1-205ENST00000497722 MYH8P13535 1937 aa0.01□□□□□ -2.41
PSPC1-205ENST00000497722 A6NIN4 97 aa0.01□□□□□ -2.41
PSPC1-205ENST00000497722 RPL7L1Q6DKI1 246 aaKnown RBP0.01□□□□□ -2.41
PSPC1-205ENST00000497722 HRNRQ86YZ3 2850 aaPredicted RBP0.01□□□□□ -2.41
PSPC1-205ENST00000497722 COL7A1Q02388 2944 aa0.01□□□□□ -2.41
PSPC1-205ENST00000497722 BIVM-ERCC5R4GMW8 1640 aa0.01□□□□□ -2.41
PSPC1-205ENST00000497722 DOCK1Q14185 1865 aa0.01□□□□□ -2.41
PSPC1-205ENST00000497722 ASXL3Q9C0F0 2248 aa0.01□□□□□ -2.41
PSPC1-205ENST00000497722 HIVEP3Q5T1R4 2406 aa0.01□□□□□ -2.41
PSPC1-205ENST00000497722 FLNCQ14315 2725 aa0□□□□□ -2.41
PSPC1-205ENST00000497722 FAM92AA1XBS5 289 aa0□□□□□ -2.41
PSPC1-205ENST00000497722 NDUFA2O43678 99 aa0□□□□□ -2.41
PSPC1-205ENST00000497722 MYH7P12883 1935 aa0□□□□□ -2.41
PSPC1-205ENST00000497722 GCHFRP30047 84 aa0□□□□□ -2.41
PSPC1-205ENST00000497722 ARPC4P59998 168 aa0□□□□□ -2.41
PSPC1-205ENST00000497722 SHROOM2Q13796 1616 aa0□□□□□ -2.41
PSPC1-205ENST00000497722 KDM3BQ7LBC6 1761 aa0□□□□□ -2.41
PSPC1-205ENST00000497722 QRICH2Q9H0J4 1663 aa0□□□□□ -2.41
PSPC1-205ENST00000497722 MBD5Q9P267 1494 aa0□□□□□ -2.41
PSPC1-205ENST00000497722 DOCK2Q92608 1830 aa-0.01□□□□□ -2.41
PSPC1-205ENST00000497722 NSD1Q96L73 2696 aaPredicted RBP-0.01□□□□□ -2.41
PSPC1-205ENST00000497722 SSPOA2VEC9 5147 aa-0.01□□□□□ -2.41
PSPC1-205ENST00000497722 TRAV1-2A0A0B4J238 106 aa-0.01□□□□□ -2.41
PSPC1-205ENST00000497722 SNCGO76070 127 aa-0.01□□□□□ -2.41
PSPC1-205ENST00000497722 SIX6O95475 246 aa-0.01□□□□□ -2.41
PSPC1-205ENST00000497722 CCL18P55774 89 aa-0.01□□□□□ -2.41
PSPC1-205ENST00000497722 SELENOWP63302 87 aa-0.01□□□□□ -2.41
PSPC1-205ENST00000497722 SNRNP25Q9BV90 132 aaKnown RBP-0.01□□□□□ -2.41
PSPC1-205ENST00000497722 LINC00312Q9Y6C7 94 aa-0.01□□□□□ -2.41
PSPC1-205ENST00000497722 F8P00451 2351 aa-0.01□□□□□ -2.41
PSPC1-205ENST00000497722 DSTQ03001 7570 aaKnown RBP-0.01□□□□□ -2.41
PSPC1-205ENST00000497722 OTOGQ6ZRI0 2925 aa-0.01□□□□□ -2.41
PSPC1-205ENST00000497722 PLXNB2O15031 1838 aa-0.01□□□□□ -2.41
PSPC1-205ENST00000497722 WNK3Q9BYP7 1800 aa-0.01□□□□□ -2.41
PSPC1-205ENST00000497722 UBR5O95071 2799 aaPredicted RBP-0.02□□□□□ -2.41
PSPC1-205ENST00000497722 K7EP13 123 aa-0.02□□□□□ -2.41
PSPC1-205ENST00000497722 PIN1P1O15428 100 aa-0.02□□□□□ -2.41
PSPC1-205ENST00000497722 BTG2P78543 158 aa-0.02□□□□□ -2.41
PSPC1-205ENST00000497722 S100A7L2Q5SY68 101 aa-0.02□□□□□ -2.41
PSPC1-205ENST00000497722 C12orf73Q69YU5 71 aa-0.02□□□□□ -2.41
PSPC1-205ENST00000497722 Q6AWC8 147 aa-0.02□□□□□ -2.41
PSPC1-205ENST00000497722 BAGE3Q86Y29 109 aa-0.02□□□□□ -2.41
PSPC1-205ENST00000497722 Q8N8P6 123 aa-0.02□□□□□ -2.41
PSPC1-205ENST00000497722 SPTSSBQ8NFR3 76 aa-0.02□□□□□ -2.41
PSPC1-205ENST00000497722 ARL11Q969Q4 196 aa-0.02□□□□□ -2.41
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms