RNA–Protein interactions for RNA: ENST00000497026.5

CSMD3-208, Transcript of CUB and Sushi multiple domains 3, humanhuman

TSL 1 (best)

Gene CSMD3, Length 1,406 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-208ENST00000497026 TMEM213A2RRL7 107 aa3.7□□□□□ -1.82
CSMD3-208ENST00000497026 A8MWV9 139 aa3.7□□□□□ -1.82
CSMD3-208ENST00000497026 PRSS46E5RG02 174 aa3.7□□□□□ -1.82
CSMD3-208ENST00000497026 K7ERJ3 54 aa3.7□□□□□ -1.82
CSMD3-208ENST00000497026 BUB3O43684 328 aa3.7□□□□□ -1.82
CSMD3-208ENST00000497026 COX7A2P2O60397 106 aa3.7□□□□□ -1.82
CSMD3-208ENST00000497026 FCGR3BO75015 233 aa3.7□□□□□ -1.82
CSMD3-208ENST00000497026 ATP5LO75964 103 aa3.7□□□□□ -1.82
CSMD3-208ENST00000497026 CSN3P07498 182 aa3.7□□□□□ -1.82
CSMD3-208ENST00000497026 EVI2AP22794 236 aa3.7□□□□□ -1.82
CSMD3-208ENST00000497026 MYCNOSP40205 109 aa3.7□□□□□ -1.82
CSMD3-208ENST00000497026 PLGLAQ15195 96 aa3.7□□□□□ -1.82
CSMD3-208ENST00000497026 MRPL23Q16540 153 aaKnown RBP3.7□□□□□ -1.82
CSMD3-208ENST00000497026 C12orf74Q32Q52 190 aa3.7□□□□□ -1.82
CSMD3-208ENST00000497026 SPINK9Q5DT21 86 aa3.7□□□□□ -1.82
CSMD3-208ENST00000497026 CFAP126Q5VTH2 177 aa3.7□□□□□ -1.82
CSMD3-208ENST00000497026 TMEM116Q8NCL8 245 aa3.7□□□□□ -1.82
CSMD3-208ENST00000497026 OR10J6PQ8NGY7 276 aa3.7□□□□□ -1.82
CSMD3-208ENST00000497026 C4orf3Q8WVX3 66 aa3.7□□□□□ -1.82
CSMD3-208ENST00000497026 PGLYRP4Q96LB8 373 aa3.7□□□□□ -1.82
CSMD3-208ENST00000497026 UBE2E2Q96LR5 201 aa3.7□□□□□ -1.82
CSMD3-208ENST00000497026 FOXA2Q9Y261 457 aaPredicted RBP3.7□□□□□ -1.82
CSMD3-208ENST00000497026 VWFP04275 2813 aa3.69□□□□□ -1.82
CSMD3-208ENST00000497026 PKD1L1Q8TDX9 2849 aa3.69□□□□□ -1.82
CSMD3-208ENST00000497026 TRBV20-1A0A075B6N2 111 aa3.69□□□□□ -1.82
CSMD3-208ENST00000497026 TRAV25A0A0B4J276 109 aa3.69□□□□□ -1.82
CSMD3-208ENST00000497026 A0A1B0GUT8 65 aa3.69□□□□□ -1.82
CSMD3-208ENST00000497026 E7EUB6 86 aa3.69□□□□□ -1.82
CSMD3-208ENST00000497026 J3KT08 172 aa3.69□□□□□ -1.82
CSMD3-208ENST00000497026 M0QXV9 152 aa3.69□□□□□ -1.82
CSMD3-208ENST00000497026 CCL24O00175 119 aa3.69□□□□□ -1.82
CSMD3-208ENST00000497026 DPM2O94777 84 aa3.69□□□□□ -1.82
CSMD3-208ENST00000497026 NCR2O95944 276 aa3.69□□□□□ -1.82
CSMD3-208ENST00000497026 IGKCP01834 107 aa3.69□□□□□ -1.82
CSMD3-208ENST00000497026 EGFEM1PQ0D2K5 195 aa3.69□□□□□ -1.82
CSMD3-208ENST00000497026 C10orf55Q5SWW7 151 aa3.69□□□□□ -1.82
CSMD3-208ENST00000497026 VKORC1L1Q8N0U8 176 aa3.69□□□□□ -1.82
CSMD3-208ENST00000497026 DNAJC30Q96LL9 226 aa3.69□□□□□ -1.82
CSMD3-208ENST00000497026 LINC00479Q96M42 142 aa3.69□□□□□ -1.82
CSMD3-208ENST00000497026 HIST1H4GQ99525 98 aa3.69□□□□□ -1.82
CSMD3-208ENST00000497026 PAXXQ9BUH6 204 aa3.69□□□□□ -1.82
CSMD3-208ENST00000497026 MCRIP2Q9BUT9 160 aaKnown RBP3.69□□□□□ -1.82
CSMD3-208ENST00000497026 CSDC2Q9Y534 153 aaKnown RBP3.69□□□□□ -1.82
CSMD3-208ENST00000497026 AGRNO00468 2067 aa3.68□□□□□ -1.82
CSMD3-208ENST00000497026 TRBV25-1A0A075B6N4 114 aa3.68□□□□□ -1.82
CSMD3-208ENST00000497026 IGHV4OR15-8A0A075B7B6 117 aa3.68□□□□□ -1.82
CSMD3-208ENST00000497026 A0A087WW49 117 aa3.68□□□□□ -1.82
CSMD3-208ENST00000497026 A0A087WX48 190 aa3.68□□□□□ -1.82
CSMD3-208ENST00000497026 C15orf61A6NNL5 157 aa3.68□□□□□ -1.82
CSMD3-208ENST00000497026 TEX22C9J3V5 150 aa3.68□□□□□ -1.82
CSMD3-208ENST00000497026 LGALS1P09382 135 aaKnown RBP3.68□□□□□ -1.82
CSMD3-208ENST00000497026 APELAP0DMC3 54 aa3.68□□□□□ -1.82
CSMD3-208ENST00000497026 MYOD1P15172 320 aa3.68□□□□□ -1.82
CSMD3-208ENST00000497026 INSL3P51460 131 aa3.68□□□□□ -1.82
CSMD3-208ENST00000497026 VMA21Q3ZAQ7 101 aa3.68□□□□□ -1.82
CSMD3-208ENST00000497026 MEIG1Q5JSS6 88 aa3.68□□□□□ -1.82
CSMD3-208ENST00000497026 TMEM78Q5T7P6 136 aa3.68□□□□□ -1.82
CSMD3-208ENST00000497026 PCP2Q8IVA1 136 aa3.68□□□□□ -1.82
CSMD3-208ENST00000497026 ORMDL3Q8N138 153 aa3.68□□□□□ -1.82
CSMD3-208ENST00000497026 TMEM167AQ8TBQ9 72 aa3.68□□□□□ -1.82
CSMD3-208ENST00000497026 SRSF12Q8WXF0 261 aaKnown RBP3.68□□□□□ -1.82
CSMD3-208ENST00000497026 DNAH3Q8TD57 4116 aa3.68□□□□□ -1.82
CSMD3-208ENST00000497026 NOTCH1P46531 2555 aa3.67□□□□□ -1.82
CSMD3-208ENST00000497026 TRAV3A0A0B4J244 114 aa3.67□□□□□ -1.82
CSMD3-208ENST00000497026 TRBV6-1A0A0K0K1D8 114 aa3.67□□□□□ -1.82
CSMD3-208ENST00000497026 C19orf71A6NCJ1 209 aa3.67□□□□□ -1.82
CSMD3-208ENST00000497026 CCDC179H3BU77 68 aa3.67□□□□□ -1.82
CSMD3-208ENST00000497026 H3BUA1 57 aa3.67□□□□□ -1.82
CSMD3-208ENST00000497026 K7EIL1 84 aa3.67□□□□□ -1.82
CSMD3-208ENST00000497026 IGLV2-11P01706 119 aa3.67□□□□□ -1.82
CSMD3-208ENST00000497026 IGHV3-11P01762 117 aa3.67□□□□□ -1.82
CSMD3-208ENST00000497026 SCGB1C2P0DMR2 95 aa3.67□□□□□ -1.82
CSMD3-208ENST00000497026 PLNP26678 52 aa3.67□□□□□ -1.82
CSMD3-208ENST00000497026 PSMB2P49721 201 aa3.67□□□□□ -1.82
CSMD3-208ENST00000497026 C10orf113Q5VZT2 155 aa3.67□□□□□ -1.82
CSMD3-208ENST00000497026 Q86TA4 180 aa3.67□□□□□ -1.82
CSMD3-208ENST00000497026 PRNDQ9UKY0 176 aa3.67□□□□□ -1.82
CSMD3-208ENST00000497026 IGLV5-37A0A075B6J1 123 aa3.66□□□□□ -1.82
CSMD3-208ENST00000497026 TRAV8-2A0A0B4J237 113 aa3.66□□□□□ -1.82
CSMD3-208ENST00000497026 TRAV8-4A0A0B4J246 113 aa3.66□□□□□ -1.82
CSMD3-208ENST00000497026 LOC107984156A0A0G2JMH3 177 aa3.66□□□□□ -1.82
CSMD3-208ENST00000497026 A0A1B0GX51 115 aa3.66□□□□□ -1.82
CSMD3-208ENST00000497026 WI2-2373I1.2A0A1W2PRP0 233 aa3.66□□□□□ -1.82
CSMD3-208ENST00000497026 SMIM9A6NGZ8 99 aa3.66□□□□□ -1.82
CSMD3-208ENST00000497026 UPK2O00526 184 aa3.66□□□□□ -1.82
CSMD3-208ENST00000497026 LTAP01374 205 aa3.66□□□□□ -1.82
CSMD3-208ENST00000497026 TRBV12-3P01733 135 aa3.66□□□□□ -1.82
CSMD3-208ENST00000497026 TRGV3P03979 118 aa3.66□□□□□ -1.82
CSMD3-208ENST00000497026 FCER1GP30273 86 aa3.66□□□□□ -1.82
CSMD3-208ENST00000497026 RPL27AP46776 148 aaKnown RBP3.66□□□□□ -1.82
CSMD3-208ENST00000497026 ZNF138P52744 262 aa3.66□□□□□ -1.82
CSMD3-208ENST00000497026 SUB1P53999 127 aaKnown RBP eCLIP3.66□□□□□ -1.82
CSMD3-208ENST00000497026 HSPE1P61604 102 aaKnown RBP3.66□□□□□ -1.82
CSMD3-208ENST00000497026 FAM159AQ6UWV7 190 aa3.66□□□□□ -1.82
CSMD3-208ENST00000497026 AMTNQ6UX39 209 aa3.66□□□□□ -1.82
CSMD3-208ENST00000497026 ARL17AQ8IVW1 177 aa3.66□□□□□ -1.82
CSMD3-208ENST00000497026 ANKRD29Q8N6D5 301 aa3.66□□□□□ -1.82
CSMD3-208ENST00000497026 NXT2Q9NPJ8 142 aaKnown RBP3.66□□□□□ -1.82
CSMD3-208ENST00000497026 EPDR1Q9UM22 224 aa3.66□□□□□ -1.82
CSMD3-208ENST00000497026 MEGF8Q7Z7M0 2845 aa3.66□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms