RNA–Protein interactions for RNA: ENST00000496946.1

SNRNP48-202, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 48, humanhuman

TSL 2

Gene SNRNP48, Length 2,610 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP48-202ENST00000496946 RETNLBQ9BQ08 111 aa2.18□□□□□ -2.06
SNRNP48-202ENST00000496946 WFDC6Q9BQY6 131 aa2.18□□□□□ -2.06
SNRNP48-202ENST00000496946 GFRA4Q9GZZ7 299 aa2.18□□□□□ -2.06
SNRNP48-202ENST00000496946 hDV103S1A0JD37 113 aa2.18□□□□□ -2.06
SNRNP48-202ENST00000496946 SDHAF1A6NFY7 115 aa2.18□□□□□ -2.06
SNRNP48-202ENST00000496946 K7EQG2 157 aa2.18□□□□□ -2.06
SNRNP48-202ENST00000496946 ERC2-IT1O76042 136 aa2.18□□□□□ -2.06
SNRNP48-202ENST00000496946 IGHV3-43DP0DP04 118 aa2.18□□□□□ -2.06
SNRNP48-202ENST00000496946 DSCR9P59020 149 aa2.18□□□□□ -2.06
SNRNP48-202ENST00000496946 C2orf83Q53S99 150 aa2.18□□□□□ -2.06
SNRNP48-202ENST00000496946 KRTAP5-4Q6L8H1 288 aa2.18□□□□□ -2.06
SNRNP48-202ENST00000496946 FAM53AQ6NSI3 398 aaPredicted RBP2.18□□□□□ -2.06
SNRNP48-202ENST00000496946 TMEM263Q8WUH6 116 aaKnown RBP2.18□□□□□ -2.06
SNRNP48-202ENST00000496946 SCGB3A1Q96QR1 104 aa2.18□□□□□ -2.06
SNRNP48-202ENST00000496946 TTTY10Q9BZA0 68 aa2.18□□□□□ -2.06
SNRNP48-202ENST00000496946 NACAE9PAV3 2078 aa2.17□□□□□ -2.06
SNRNP48-202ENST00000496946 NUP214P35658 2090 aaPredicted RBP2.17□□□□□ -2.06
SNRNP48-202ENST00000496946 FAM72CH0Y354 149 aa2.17□□□□□ -2.06
SNRNP48-202ENST00000496946 DNAL4O96015 105 aa2.17□□□□□ -2.06
SNRNP48-202ENST00000496946 COX7A1P24310 79 aa2.17□□□□□ -2.06
SNRNP48-202ENST00000496946 CCL14Q16627 93 aa2.17□□□□□ -2.06
SNRNP48-202ENST00000496946 FAM72DQ6L9T8 149 aa2.17□□□□□ -2.06
SNRNP48-202ENST00000496946 C17orf82Q86X59 251 aaPredicted RBP2.17□□□□□ -2.06
SNRNP48-202ENST00000496946 SNURFQ9Y675 71 aa2.17□□□□□ -2.06
SNRNP48-202ENST00000496946 COL4A4P53420 1690 aaPredicted RBP2.17□□□□□ -2.06
SNRNP48-202ENST00000496946 COL18A1P39060 1754 aa2.17□□□□□ -2.06
SNRNP48-202ENST00000496946 MED13Q9UHV7 2174 aa2.17□□□□□ -2.06
SNRNP48-202ENST00000496946 ARID1AO14497 2285 aa2.17□□□□□ -2.06
SNRNP48-202ENST00000496946 COL4A6Q14031 1691 aa2.17□□□□□ -2.06
SNRNP48-202ENST00000496946 TMEM14DPA8MWL7 114 aa2.17□□□□□ -2.06
SNRNP48-202ENST00000496946 CHKB-CPT1BH3BT56 60 aa2.17□□□□□ -2.06
SNRNP48-202ENST00000496946 IGHV3-30P01768 117 aa2.17□□□□□ -2.06
SNRNP48-202ENST00000496946 IGHV3-30-5P0DP03 117 aa2.17□□□□□ -2.06
SNRNP48-202ENST00000496946 NOVP48745 357 aa2.17□□□□□ -2.06
SNRNP48-202ENST00000496946 C9orf116Q5BN46 136 aaPredicted RBP2.17□□□□□ -2.06
SNRNP48-202ENST00000496946 Q5VV11 94 aa2.17□□□□□ -2.06
SNRNP48-202ENST00000496946 LYPD6Q86Y78 171 aa2.17□□□□□ -2.06
SNRNP48-202ENST00000496946 CDC42SE1Q9NRR8 79 aa2.17□□□□□ -2.06
SNRNP48-202ENST00000496946 ZNF355PQ9NSJ1 428 aa2.17□□□□□ -2.06
SNRNP48-202ENST00000496946 LHFPL6Q9Y693 200 aa2.17□□□□□ -2.06
SNRNP48-202ENST00000496946 MYOFQ9NZM1 2061 aa2.16□□□□□ -2.06
SNRNP48-202ENST00000496946 PCNX2A6NKB5 2137 aa2.16□□□□□ -2.06
SNRNP48-202ENST00000496946 LTBP2Q14767 1821 aa2.16□□□□□ -2.06
SNRNP48-202ENST00000496946 IGLV5-37A0A075B6J1 123 aa2.16□□□□□ -2.06
SNRNP48-202ENST00000496946 TRAV23DV6A0A075B6W5 121 aa2.16□□□□□ -2.06
SNRNP48-202ENST00000496946 IGHV3OR16-10A0A075B7F0 116 aa2.16□□□□□ -2.06
SNRNP48-202ENST00000496946 IGKV3D-20A0A0C4DH25 116 aa2.16□□□□□ -2.06
SNRNP48-202ENST00000496946 PINLYPA6NC86 204 aa2.16□□□□□ -2.06
SNRNP48-202ENST00000496946 RPL37AP8A6NKH3 93 aa2.16□□□□□ -2.06
SNRNP48-202ENST00000496946 CHTF8P0CG12 524 aa2.16□□□□□ -2.06
SNRNP48-202ENST00000496946 ARL14EPLP0DKL9 152 aa2.16□□□□□ -2.06
SNRNP48-202ENST00000496946 HMGA1P17096 107 aaKnown RBP2.16□□□□□ -2.06
SNRNP48-202ENST00000496946 C17orf58Q2M2W7 97 aa2.16□□□□□ -2.06
SNRNP48-202ENST00000496946 LIMD2Q9BT23 127 aa2.16□□□□□ -2.06
SNRNP48-202ENST00000496946 TMEM167BQ9NRX6 74 aa2.16□□□□□ -2.06
SNRNP48-202ENST00000496946 TMEM14AQ9Y6G1 99 aa2.16□□□□□ -2.06
SNRNP48-202ENST00000496946 GOLGA4Q13439 2230 aaKnown RBP2.16□□□□□ -2.06
SNRNP48-202ENST00000496946 EML5Q05BV3 1969 aa2.16□□□□□ -2.06
SNRNP48-202ENST00000496946 TRAV40A0A0B4J280 105 aa2.16□□□□□ -2.06
SNRNP48-202ENST00000496946 IGHV3-16A0A0C4DH30 117 aa2.16□□□□□ -2.06
SNRNP48-202ENST00000496946 KRTAP16-1A8MUX0 517 aa2.16□□□□□ -2.06
SNRNP48-202ENST00000496946 SPTBP11277 2137 aa2.16□□□□□ -2.06
SNRNP48-202ENST00000496946 RPL27AP46776 148 aaKnown RBP2.16□□□□□ -2.06
SNRNP48-202ENST00000496946 RPL28P46779 137 aaKnown RBP2.16□□□□□ -2.06
SNRNP48-202ENST00000496946 UBALD1Q8TB05 177 aa2.16□□□□□ -2.06
SNRNP48-202ENST00000496946 KLF14Q8TD94 323 aaPredicted RBP2.16□□□□□ -2.06
SNRNP48-202ENST00000496946 RPP21Q9H633 154 aaKnown RBP2.16□□□□□ -2.06
SNRNP48-202ENST00000496946 LINC00574Q9H8X3 128 aa2.16□□□□□ -2.06
SNRNP48-202ENST00000496946 TMEM14BQ9NUH8 114 aa2.16□□□□□ -2.06
SNRNP48-202ENST00000496946 ICOSQ9Y6W8 199 aa2.16□□□□□ -2.06
SNRNP48-202ENST00000496946 A0A0J9YY99 117 aa2.15□□□□□ -2.06
SNRNP48-202ENST00000496946 LINC01546A6NGU7 62 aa2.15□□□□□ -2.06
SNRNP48-202ENST00000496946 LOC730098B7Z3J9 87 aa2.15□□□□□ -2.06
SNRNP48-202ENST00000496946 ZNF137PP52743 207 aa2.15□□□□□ -2.06
SNRNP48-202ENST00000496946 Q6ZTC4 211 aa2.15□□□□□ -2.06
SNRNP48-202ENST00000496946 U3KQK5 164 aa2.15□□□□□ -2.06
SNRNP48-202ENST00000496946 DSCAML1Q8TD84 2053 aa2.15□□□□□ -2.07
SNRNP48-202ENST00000496946 IGHV7-81A0A0B4J1V7 117 aa2.15□□□□□ -2.07
SNRNP48-202ENST00000496946 IGHV3-72A0A0B4J1Y9 119 aa2.15□□□□□ -2.07
SNRNP48-202ENST00000496946 TRAV12-1A0A0B4J245 112 aa2.15□□□□□ -2.07
SNRNP48-202ENST00000496946 IGHV5-10-1A0A0J9YXX1 117 aa2.15□□□□□ -2.07
SNRNP48-202ENST00000496946 PLXNA2O75051 1894 aa2.15□□□□□ -2.07
SNRNP48-202ENST00000496946 IGKV1-39P01597 117 aa2.15□□□□□ -2.07
SNRNP48-202ENST00000496946 IGKV1D-39P04432 117 aa2.15□□□□□ -2.07
SNRNP48-202ENST00000496946 EIF4EBP1Q13541 118 aaPredicted RBP2.15□□□□□ -2.07
SNRNP48-202ENST00000496946 FLVCR1-AS1Q8TAF5 88 aa2.15□□□□□ -2.07
SNRNP48-202ENST00000496946 XAGE1AQ9HD64 81 aa2.15□□□□□ -2.07
SNRNP48-202ENST00000496946 MYO16Q9Y6X6 1858 aa2.15□□□□□ -2.07
SNRNP48-202ENST00000496946 MPDZO75970 2070 aa2.15□□□□□ -2.07
SNRNP48-202ENST00000496946 TET1Q8NFU7 2136 aa2.14□□□□□ -2.07
SNRNP48-202ENST00000496946 COL4A5P29400 1685 aa2.14□□□□□ -2.07
SNRNP48-202ENST00000496946 C11orf86A6NJI1 115 aa2.14□□□□□ -2.07
SNRNP48-202ENST00000496946 F8VRH5 84 aa2.14□□□□□ -2.07
SNRNP48-202ENST00000496946 H7C2G1 150 aa2.14□□□□□ -2.07
SNRNP48-202ENST00000496946 TSPEAR-AS2P59090 65 aa2.14□□□□□ -2.07
SNRNP48-202ENST00000496946 CASC2Q6XLA1 102 aa2.14□□□□□ -2.07
SNRNP48-202ENST00000496946 ARHGAP5-AS1Q96IT6 56 aa2.14□□□□□ -2.07
SNRNP48-202ENST00000496946 IMMP1LQ96LU5 166 aa2.14□□□□□ -2.07
SNRNP48-202ENST00000496946 FGF23Q9GZV9 251 aaPredicted RBP2.14□□□□□ -2.07
SNRNP48-202ENST00000496946 LRP4O75096 1905 aa2.14□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 67.6 ms