RNA–Protein interactions for RNA: ENST00000496335.1

PDAP1-204, Transcript of PDGFA associated protein 1, humanhuman

TSL 3

Gene PDAP1, Length 302 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDAP1-204ENST00000496335 CEBPGP53567 150 aa9.66□□□□□ -0.86
PDAP1-204ENST00000496335 CACNG7P62955 275 aa9.66□□□□□ -0.86
PDAP1-204ENST00000496335 LAGE3Q14657 143 aa9.66□□□□□ -0.86
PDAP1-204ENST00000496335 F2Z2F3 143 aa9.65□□□□□ -0.86
PDAP1-204ENST00000496335 NTF3P20783 257 aa9.65□□□□□ -0.86
PDAP1-204ENST00000496335 DNAJC30Q96LL9 226 aa9.65□□□□□ -0.86
PDAP1-204ENST00000496335 KRTAP4-5Q9BYR2 181 aa9.65□□□□□ -0.86
PDAP1-204ENST00000496335 EIF5A2Q9GZV4 153 aaKnown RBP9.65□□□□□ -0.86
PDAP1-204ENST00000496335 RPP21Q9H633 154 aaKnown RBP9.65□□□□□ -0.86
PDAP1-204ENST00000496335 URGCP-MRPS24S4R325 110 aa9.65□□□□□ -0.86
PDAP1-204ENST00000496335 TRBV6-8A0A0A6YYG3 113 aa9.64□□□□□ -0.87
PDAP1-204ENST00000496335 TRAV8-3A0A0A6YYJ7 113 aa9.64□□□□□ -0.87
PDAP1-204ENST00000496335 CDPF1Q6NVV7 123 aa9.64□□□□□ -0.87
PDAP1-204ENST00000496335 KLK12Q9UKR0 248 aa9.64□□□□□ -0.87
PDAP1-204ENST00000496335 A0A087WX48 190 aa9.63□□□□□ -0.87
PDAP1-204ENST00000496335 M0QY20 66 aa9.63□□□□□ -0.87
PDAP1-204ENST00000496335 CTRLP40313 264 aa9.63□□□□□ -0.87
PDAP1-204ENST00000496335 SUMO4Q6EEV6 95 aa9.63□□□□□ -0.87
PDAP1-204ENST00000496335 MAPKAPK5-AS1Q8N8E1 139 aa9.63□□□□□ -0.87
PDAP1-204ENST00000496335 FAM210AQ96ND0 272 aa9.63□□□□□ -0.87
PDAP1-204ENST00000496335 TM2D2Q9BX73 214 aa9.63□□□□□ -0.87
PDAP1-204ENST00000496335 TMEM262E9PQX1 116 aa9.62□□□□□ -0.87
PDAP1-204ENST00000496335 TRGC1P0CF51 173 aa9.62□□□□□ -0.87
PDAP1-204ENST00000496335 KRTAP10-1P60331 282 aa9.62□□□□□ -0.87
PDAP1-204ENST00000496335 WFDC2Q14508 124 aa9.62□□□□□ -0.87
PDAP1-204ENST00000496335 NTM-AS1Q6ZSK4 140 aa9.62□□□□□ -0.87
PDAP1-204ENST00000496335 GTSF1Q8WW33 167 aa9.62□□□□□ -0.87
PDAP1-204ENST00000496335 GATCO43716 136 aaKnown RBP9.61□□□□□ -0.87
PDAP1-204ENST00000496335 TWIST1Q15672 202 aa9.61□□□□□ -0.87
PDAP1-204ENST00000496335 WDR73Q6P4I2 378 aa9.61□□□□□ -0.87
PDAP1-204ENST00000496335 Q8N814 137 aa9.61□□□□□ -0.87
PDAP1-204ENST00000496335 SREK1IP1Q8N9Q2 155 aaPredicted RBP9.61□□□□□ -0.87
PDAP1-204ENST00000496335 UBE2WQ96B02 151 aa9.61□□□□□ -0.87
PDAP1-204ENST00000496335 SMIM7Q9BQ49 75 aa9.61□□□□□ -0.87
PDAP1-204ENST00000496335 CHCHD7Q9BUK0 85 aa9.61□□□□□ -0.87
PDAP1-204ENST00000496335 DPH3P1Q9H4G8 78 aa9.61□□□□□ -0.87
PDAP1-204ENST00000496335 H7C1H1 209 aa9.6□□□□□ -0.87
PDAP1-204ENST00000496335 LECT2O14960 151 aa9.6□□□□□ -0.87
PDAP1-204ENST00000496335 SRP19P09132 144 aaKnown RBP9.6□□□□□ -0.87
PDAP1-204ENST00000496335 MPV17L2Q567V2 206 aa9.6□□□□□ -0.87
PDAP1-204ENST00000496335 KCNIP4Q6PIL6 250 aa9.6□□□□□ -0.87
PDAP1-204ENST00000496335 FAM231DQ6ZW35 169 aa9.6□□□□□ -0.87
PDAP1-204ENST00000496335 CHCHD5Q9BSY4 110 aa9.6□□□□□ -0.87
PDAP1-204ENST00000496335 CNFNQ9BYD5 112 aa9.6□□□□□ -0.87
PDAP1-204ENST00000496335 IGKV2D-24A0A075B6R9 120 aa9.59□□□□□ -0.87
PDAP1-204ENST00000496335 IGLV5-52A0A0A0MRZ9 124 aa9.59□□□□□ -0.87
PDAP1-204ENST00000496335 GCSHP23434 173 aa9.59□□□□□ -0.87
PDAP1-204ENST00000496335 ELOBQ15370 118 aa9.59□□□□□ -0.87
PDAP1-204ENST00000496335 RASL11AQ6T310 242 aa9.59□□□□□ -0.87
PDAP1-204ENST00000496335 BAALCQ8WXS3 180 aa9.59□□□□□ -0.87
PDAP1-204ENST00000496335 ZNF727A8MUV8 499 aa9.58□□□□□ -0.88
PDAP1-204ENST00000496335 FOXA3P55318 350 aaPredicted RBP9.58□□□□□ -0.88
PDAP1-204ENST00000496335 TMEM97Q5BJF2 176 aa9.58□□□□□ -0.88
PDAP1-204ENST00000496335 LINC01551Q86U37 167 aa9.58□□□□□ -0.88
PDAP1-204ENST00000496335 C15orf54Q8N8G6 183 aa9.58□□□□□ -0.88
PDAP1-204ENST00000496335 Q8N976 141 aa9.58□□□□□ -0.88
PDAP1-204ENST00000496335 DEFB104AQ8WTQ1 72 aa9.58□□□□□ -0.88
PDAP1-204ENST00000496335 PGLYRP4Q96LB8 373 aa9.58□□□□□ -0.88
PDAP1-204ENST00000496335 TRAV26-2A0A0B4J265 109 aa9.57□□□□□ -0.88
PDAP1-204ENST00000496335 A8MWL6 223 aa9.57□□□□□ -0.88
PDAP1-204ENST00000496335 NDUFS6O75380 124 aaKnown RBP9.57□□□□□ -0.88
PDAP1-204ENST00000496335 ANGP03950 147 aaKnown RBP9.57□□□□□ -0.88
PDAP1-204ENST00000496335 XGP55808 180 aa9.57□□□□□ -0.88
PDAP1-204ENST00000496335 GAGE6Q13070 117 aa9.57□□□□□ -0.88
PDAP1-204ENST00000496335 ATRAIDQ6UW56 229 aa9.57□□□□□ -0.88
PDAP1-204ENST00000496335 TEX261Q6UWH6 196 aa9.57□□□□□ -0.88
PDAP1-204ENST00000496335 ENHOQ6UWT2 76 aa9.57□□□□□ -0.88
PDAP1-204ENST00000496335 Q8N1X5 172 aa9.57□□□□□ -0.88
PDAP1-204ENST00000496335 NTN5Q8WTR8 489 aaPredicted RBP9.57□□□□□ -0.88
PDAP1-204ENST00000496335 RMI2Q96E14 147 aa9.57□□□□□ -0.88
PDAP1-204ENST00000496335 NIT2Q9NQR4 276 aa9.57□□□□□ -0.88
PDAP1-204ENST00000496335 COX11Q9Y6N1 276 aa9.57□□□□□ -0.88
PDAP1-204ENST00000496335 TRBV25-1A0A075B6N4 114 aa9.56□□□□□ -0.88
PDAP1-204ENST00000496335 C9JQL5 133 aa9.56□□□□□ -0.88
PDAP1-204ENST00000496335 RBX1P62877 108 aa9.56□□□□□ -0.88
PDAP1-204ENST00000496335 GATD1Q8NB37 220 aa9.56□□□□□ -0.88
PDAP1-204ENST00000496335 IGHV1-24A0A0C4DH33 117 aa9.55□□□□□ -0.88
PDAP1-204ENST00000496335 SRSF3P84103 164 aaKnown RBP9.55□□□□□ -0.88
PDAP1-204ENST00000496335 Q0VG73 95 aa9.55□□□□□ -0.88
PDAP1-204ENST00000496335 IQCJQ1A5X6 159 aa9.55□□□□□ -0.88
PDAP1-204ENST00000496335 CT83Q5H943 113 aa9.55□□□□□ -0.88
PDAP1-204ENST00000496335 IGLV2-33A0A075B6J2 118 aaPredicted RBP9.54□□□□□ -0.88
PDAP1-204ENST00000496335 CRPP02741 224 aa9.54□□□□□ -0.88
PDAP1-204ENST00000496335 PKIAP61925 76 aa9.54□□□□□ -0.88
PDAP1-204ENST00000496335 OSTCQ9NRP0 149 aa9.54□□□□□ -0.88
PDAP1-204ENST00000496335 FAT1Q14517 4588 aa9.54□□□□□ -0.88
PDAP1-204ENST00000496335 DNAH8Q96JB1 4490 aa9.53□□□□□ -0.88
PDAP1-204ENST00000496335 HAMPP81172 84 aa9.53□□□□□ -0.88
PDAP1-204ENST00000496335 TMEM241Q24JQ0 296 aa9.53□□□□□ -0.88
PDAP1-204ENST00000496335 CLPSL2Q6UWE3 100 aa9.53□□□□□ -0.88
PDAP1-204ENST00000496335 SMIM15Q7Z3B0 74 aa9.53□□□□□ -0.88
PDAP1-204ENST00000496335 TSKUQ8WUA8 353 aa9.53□□□□□ -0.88
PDAP1-204ENST00000496335 RPL39LQ96EH5 51 aaKnown RBP9.53□□□□□ -0.88
PDAP1-204ENST00000496335 C1orf43Q9BWL3 253 aa9.53□□□□□ -0.88
PDAP1-204ENST00000496335 HIGD1CA8MV81 97 aa9.52□□□□□ -0.89
PDAP1-204ENST00000496335 LINC00269Q8N2A0 174 aa9.52□□□□□ -0.89
PDAP1-204ENST00000496335 TMEM243Q9BU79 118 aa9.52□□□□□ -0.89
PDAP1-204ENST00000496335 V9GYV3 84 aa9.52□□□□□ -0.89
PDAP1-204ENST00000496335 A0A1B0GUT8 65 aa9.51□□□□□ -0.89
PDAP1-204ENST00000496335 RPL23P62829 140 aaKnown RBP9.51□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 78.4 ms