RNA–Protein interactions for RNA: ENST00000494780.1

COL27A1-208, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 4

Gene COL27A1, Length 514 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-208ENST00000494780 FAM213BQ8TBF2 198 aa15.07■□□□□ 0
COL27A1-208ENST00000494780 VAX2Q9UIW0 290 aa15.07■□□□□ 0
COL27A1-208ENST00000494780 UMAD1C9J7I0 102 aa15.06■□□□□ 0
COL27A1-208ENST00000494780 USP17L23D6RBM5 183 aa15.06■□□□□ 0
COL27A1-208ENST00000494780 F5H697 171 aa15.06■□□□□ 0
COL27A1-208ENST00000494780 MUC21A0A0G2JKD1 596 aa15.05■□□□□ -0
COL27A1-208ENST00000494780 MUC21A0A140T8X8 626 aa15.05■□□□□ -0
COL27A1-208ENST00000494780 HLA-DQA1P01909 254 aa15.05■□□□□ -0
COL27A1-208ENST00000494780 ZNF345Q14585 488 aa15.05■□□□□ -0
COL27A1-208ENST00000494780 SERTAD4-AS1Q5TG53 156 aa15.05■□□□□ -0
COL27A1-208ENST00000494780 KCNRGQ8N5I3 272 aa15.05■□□□□ -0
COL27A1-208ENST00000494780 A0A1B0GV50 99 aa15.04■□□□□ -0
COL27A1-208ENST00000494780 NTM-AS1Q6ZSK4 140 aa15.04■□□□□ -0
COL27A1-208ENST00000494780 PRR34Q9NV39 138 aa15.04■□□□□ -0
COL27A1-208ENST00000494780 SMIM17P0DL12 118 aa15.03■□□□□ -0
COL27A1-208ENST00000494780 DGAT2L7PQ6IED9 249 aa15.03■□□□□ -0
COL27A1-208ENST00000494780 KIF25-AS1Q9Y6Z4 181 aa15.03■□□□□ -0
COL27A1-208ENST00000494780 SMLR1H3BR10 107 aa15.02■□□□□ -0
COL27A1-208ENST00000494780 PRSS1P07477 247 aa15.02■□□□□ -0
COL27A1-208ENST00000494780 RGS21Q2M5E4 152 aa15.02■□□□□ -0
COL27A1-208ENST00000494780 TMUB2Q71RG4 321 aa15.02■□□□□ -0
COL27A1-208ENST00000494780 AP1S3Q96PC3 154 aa15.02■□□□□ -0
COL27A1-208ENST00000494780 DERL1Q9BUN8 251 aa15.02■□□□□ -0
COL27A1-208ENST00000494780 SSTP61278 116 aa15.01□□□□□ -0.01
COL27A1-208ENST00000494780 RBX1P62877 108 aa15.01□□□□□ -0.01
COL27A1-208ENST00000494780 LRP1Q07954 4544 aaKnown RBP15□□□□□ -0.01
COL27A1-208ENST00000494780 TRBV25-1A0A075B6N4 114 aa15□□□□□ -0.01
COL27A1-208ENST00000494780 H2AFB1P0C5Y9 115 aa15□□□□□ -0.01
COL27A1-208ENST00000494780 RPL37AP61513 92 aaKnown RBP15□□□□□ -0.01
COL27A1-208ENST00000494780 LINC00269Q8N2A0 174 aa15□□□□□ -0.01
COL27A1-208ENST00000494780 C9orf163Q8N9P6 203 aa15□□□□□ -0.01
COL27A1-208ENST00000494780 GAGE6Q13070 117 aa14.99□□□□□ -0.01
COL27A1-208ENST00000494780 KRTAP26-1Q6PEX3 210 aa14.99□□□□□ -0.01
COL27A1-208ENST00000494780 RPL35P42766 123 aaKnown RBP14.98□□□□□ -0.01
COL27A1-208ENST00000494780 IQCJQ1A5X6 159 aa14.98□□□□□ -0.01
COL27A1-208ENST00000494780 CLPSL2Q6UWE3 100 aa14.98□□□□□ -0.01
COL27A1-208ENST00000494780 A0A0D9SG52 128 aa14.97□□□□□ -0.01
COL27A1-208ENST00000494780 HMSDA8MTL9 139 aa14.97□□□□□ -0.01
COL27A1-208ENST00000494780 IGHV1-24A0A0C4DH33 117 aa14.96□□□□□ -0.01
COL27A1-208ENST00000494780 KANTRA0A1W2PQU2 76 aa14.96□□□□□ -0.01
COL27A1-208ENST00000494780 M0QY20 66 aa14.96□□□□□ -0.01
COL27A1-208ENST00000494780 BCL2L11O43521 198 aa14.96□□□□□ -0.01
COL27A1-208ENST00000494780 H7C1H1 209 aa14.95□□□□□ -0.02
COL27A1-208ENST00000494780 EIF5AP63241 154 aaKnown RBP14.95□□□□□ -0.02
COL27A1-208ENST00000494780 CLRN3Q8NCR9 226 aa14.95□□□□□ -0.02
COL27A1-208ENST00000494780 C11orf52Q96A22 123 aa14.95□□□□□ -0.02
COL27A1-208ENST00000494780 MGPP08493 103 aa14.94□□□□□ -0.02
COL27A1-208ENST00000494780 IGLC6P0CF74 106 aa14.94□□□□□ -0.02
COL27A1-208ENST00000494780 RPS20P60866 119 aaKnown RBP14.94□□□□□ -0.02
COL27A1-208ENST00000494780 REG3AQ06141 175 aa14.94□□□□□ -0.02
COL27A1-208ENST00000494780 FER1L6-AS1Q8NA97 138 aa14.94□□□□□ -0.02
COL27A1-208ENST00000494780 MANBALQ9NQG1 85 aa14.94□□□□□ -0.02
COL27A1-208ENST00000494780 SDIM1Q6ZPB5 146 aa14.93□□□□□ -0.02
COL27A1-208ENST00000494780 TPPP3Q9BW30 176 aa14.93□□□□□ -0.02
COL27A1-208ENST00000494780 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP14.93□□□□□ -0.02
COL27A1-208ENST00000494780 FAT3Q8TDW7 4589 aa14.93□□□□□ -0.02
COL27A1-208ENST00000494780 GZMBP10144 247 aa14.92□□□□□ -0.02
COL27A1-208ENST00000494780 CACNG7P62955 275 aa14.92□□□□□ -0.02
COL27A1-208ENST00000494780 SUMO4Q6EEV6 95 aa14.92□□□□□ -0.02
COL27A1-208ENST00000494780 DAZAP1Q96EP5 407 aaKnown RBP14.92□□□□□ -0.02
COL27A1-208ENST00000494780 TRAV8-4A0A0B4J246 113 aa14.91□□□□□ -0.02
COL27A1-208ENST00000494780 P01737 135 aa14.91□□□□□ -0.02
COL27A1-208ENST00000494780 CENPWQ5EE01 88 aa14.91□□□□□ -0.02
COL27A1-208ENST00000494780 OR2D3Q8NGH3 330 aa14.91□□□□□ -0.02
COL27A1-208ENST00000494780 GNG13Q9P2W3 67 aa14.91□□□□□ -0.02
COL27A1-208ENST00000494780 IGLV10-54A0A075B6I4 117 aa14.9□□□□□ -0.02
COL27A1-208ENST00000494780 A0A1B0GUV1 79 aa14.9□□□□□ -0.02
COL27A1-208ENST00000494780 HNRNPA3P51991 378 aaKnown RBP14.9□□□□□ -0.02
COL27A1-208ENST00000494780 CNBPP62633 177 aaKnown RBP14.9□□□□□ -0.02
COL27A1-208ENST00000494780 CCL20P78556 96 aa14.9□□□□□ -0.02
COL27A1-208ENST00000494780 C20orf203Q8NBC4 194 aa14.9□□□□□ -0.02
COL27A1-208ENST00000494780 TRAV1-1A0A0B4J248 108 aa14.89□□□□□ -0.03
COL27A1-208ENST00000494780 C19orf71A6NCJ1 209 aa14.89□□□□□ -0.03
COL27A1-208ENST00000494780 PANO1I0J062 215 aa14.89□□□□□ -0.03
COL27A1-208ENST00000494780 SMIM12Q96EX1 92 aa14.89□□□□□ -0.03
COL27A1-208ENST00000494780 TMEM243Q9BU79 118 aa14.89□□□□□ -0.03
COL27A1-208ENST00000494780 XKRY2A2RUG3 117 aa14.88□□□□□ -0.03
COL27A1-208ENST00000494780 F2Z2F3 143 aa14.88□□□□□ -0.03
COL27A1-208ENST00000494780 NKX2-5P52952 324 aaPredicted RBP14.88□□□□□ -0.03
COL27A1-208ENST00000494780 RASL11AQ6T310 242 aa14.88□□□□□ -0.03
COL27A1-208ENST00000494780 HMCN2Q8NDA2 5059 aa14.88□□□□□ -0.03
COL27A1-208ENST00000494780 hDV102S1A0JD36 115 aa14.87□□□□□ -0.03
COL27A1-208ENST00000494780 CIRBPQ14011 172 aaKnown RBP14.87□□□□□ -0.03
COL27A1-208ENST00000494780 PGLYRP4Q96LB8 373 aa14.87□□□□□ -0.03
COL27A1-208ENST00000494780 PLA2G2DQ9UNK4 145 aa14.87□□□□□ -0.03
COL27A1-208ENST00000494780 TRGC1P0CF51 173 aa14.86□□□□□ -0.03
COL27A1-208ENST00000494780 GNG4P50150 75 aa14.86□□□□□ -0.03
COL27A1-208ENST00000494780 NIT2Q9NQR4 276 aa14.86□□□□□ -0.03
COL27A1-208ENST00000494780 PKHD1L1Q86WI1 4243 aa14.86□□□□□ -0.03
COL27A1-208ENST00000494780 IGLV4-60A0A075B6I1 120 aa14.85□□□□□ -0.03
COL27A1-208ENST00000494780 RAB19A4D1S5 217 aa14.85□□□□□ -0.03
COL27A1-208ENST00000494780 RAB5CP51148 216 aa14.85□□□□□ -0.03
COL27A1-208ENST00000494780 DPH3P1Q9H4G8 78 aa14.85□□□□□ -0.03
COL27A1-208ENST00000494780 AP5S1Q9NUS5 200 aa14.85□□□□□ -0.03
COL27A1-208ENST00000494780 TEX46H3BTG2 121 aa14.84□□□□□ -0.03
COL27A1-208ENST00000494780 GFRA4Q9GZZ7 299 aa14.84□□□□□ -0.03
COL27A1-208ENST00000494780 IGHV3-64A0A075B6Q5 118 aa14.83□□□□□ -0.04
COL27A1-208ENST00000494780 TRAV16A0A0A6YYK6 109 aaPredicted RBP14.83□□□□□ -0.04
COL27A1-208ENST00000494780 IFNA1P01562 189 aa14.83□□□□□ -0.04
COL27A1-208ENST00000494780 LYZL1Q6UWQ5 148 aa14.83□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 126 ms