RNA–Protein interactions for RNA: ENST00000494776.1

LIME1-209, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

TSL 5

Gene LIME1, Length 391 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-209ENST00000494776 ADIRFQ15847 76 aa10.8□□□□□ -0.68
LIME1-209ENST00000494776 CT83Q5H943 113 aa10.8□□□□□ -0.68
LIME1-209ENST00000494776 GTSF1Q8WW33 167 aa10.8□□□□□ -0.68
LIME1-209ENST00000494776 PGLYRP4Q96LB8 373 aa10.8□□□□□ -0.68
LIME1-209ENST00000494776 OSTCQ9NRP0 149 aa10.8□□□□□ -0.68
LIME1-209ENST00000494776 SUMO4Q6EEV6 95 aa10.79□□□□□ -0.68
LIME1-209ENST00000494776 CNFNQ9BYD5 112 aa10.79□□□□□ -0.68
LIME1-209ENST00000494776 NAT8Q9UHE5 227 aa10.79□□□□□ -0.68
LIME1-209ENST00000494776 URGCP-MRPS24S4R325 110 aa10.79□□□□□ -0.68
LIME1-209ENST00000494776 RPL23P62829 140 aaKnown RBP10.78□□□□□ -0.68
LIME1-209ENST00000494776 KCNIP4Q6PIL6 250 aa10.78□□□□□ -0.68
LIME1-209ENST00000494776 TSKUQ8WUA8 353 aa10.78□□□□□ -0.68
LIME1-209ENST00000494776 ISOC2Q96AB3 205 aa10.78□□□□□ -0.68
LIME1-209ENST00000494776 M0QY20 66 aa10.77□□□□□ -0.69
LIME1-209ENST00000494776 DNAJC30Q96LL9 226 aa10.77□□□□□ -0.69
LIME1-209ENST00000494776 HIGD1CA8MV81 97 aa10.76□□□□□ -0.69
LIME1-209ENST00000494776 IBA57-AS1B1ANH7 110 aa10.76□□□□□ -0.69
LIME1-209ENST00000494776 RASL11AQ6T310 242 aa10.76□□□□□ -0.69
LIME1-209ENST00000494776 Q6ZRN7 208 aaPredicted RBP10.76□□□□□ -0.69
LIME1-209ENST00000494776 DAZ4Q86SG3 579 aaKnown RBP10.76□□□□□ -0.69
LIME1-209ENST00000494776 GFRA4Q9GZZ7 299 aa10.76□□□□□ -0.69
LIME1-209ENST00000494776 Q9HAA7 133 aa10.76□□□□□ -0.69
LIME1-209ENST00000494776 DAZ3Q9NR90 486 aaKnown RBP10.76□□□□□ -0.69
LIME1-209ENST00000494776 A0A087WX48 190 aa10.75□□□□□ -0.69
LIME1-209ENST00000494776 TRBV6-8A0A0A6YYG3 113 aa10.75□□□□□ -0.69
LIME1-209ENST00000494776 TMEM262E9PQX1 116 aa10.75□□□□□ -0.69
LIME1-209ENST00000494776 EREGO14944 169 aa10.75□□□□□ -0.69
LIME1-209ENST00000494776 PSCAO43653 123 aa10.75□□□□□ -0.69
LIME1-209ENST00000494776 FOXA3P55318 350 aaPredicted RBP10.75□□□□□ -0.69
LIME1-209ENST00000494776 TMEM97Q5BJF2 176 aa10.75□□□□□ -0.69
LIME1-209ENST00000494776 V9GYV3 84 aa10.75□□□□□ -0.69
LIME1-209ENST00000494776 A0A1B0GUT8 65 aa10.74□□□□□ -0.69
LIME1-209ENST00000494776 FAM231BA6NCW3 169 aa10.74□□□□□ -0.69
LIME1-209ENST00000494776 NIT1Q86X76 327 aa10.74□□□□□ -0.69
LIME1-209ENST00000494776 Q8N3U1 123 aa10.74□□□□□ -0.69
LIME1-209ENST00000494776 NIT2Q9NQR4 276 aa10.74□□□□□ -0.69
LIME1-209ENST00000494776 DNAH17Q9UFH2 4485 aa10.74□□□□□ -0.69
LIME1-209ENST00000494776 FAT2Q9NYQ8 4349 aa10.73□□□□□ -0.69
LIME1-209ENST00000494776 CHCHD5Q9BSY4 110 aa10.73□□□□□ -0.69
LIME1-209ENST00000494776 HERC2O95714 4834 aa10.73□□□□□ -0.69
LIME1-209ENST00000494776 TRAV26-2A0A0B4J265 109 aa10.72□□□□□ -0.69
LIME1-209ENST00000494776 LAGE3Q14657 143 aa10.72□□□□□ -0.69
LIME1-209ENST00000494776 CLLU1Q5K131 121 aa10.72□□□□□ -0.69
LIME1-209ENST00000494776 SPATA12Q7Z6I5 190 aa10.72□□□□□ -0.69
LIME1-209ENST00000494776 NAT8BQ9UHF3 227 aa10.72□□□□□ -0.69
LIME1-209ENST00000494776 TRBV25-1A0A075B6N4 114 aa10.71□□□□□ -0.69
LIME1-209ENST00000494776 TRAV8-3A0A0A6YYJ7 113 aa10.71□□□□□ -0.69
LIME1-209ENST00000494776 C16orf90A8MZG2 172 aa10.71□□□□□ -0.69
LIME1-209ENST00000494776 PKIAP61925 76 aa10.71□□□□□ -0.69
LIME1-209ENST00000494776 RIGQ13278 110 aa10.71□□□□□ -0.69
LIME1-209ENST00000494776 ELOBQ15370 118 aa10.71□□□□□ -0.69
LIME1-209ENST00000494776 GATD1Q8NB37 220 aa10.71□□□□□ -0.69
LIME1-209ENST00000494776 CHCHD7Q9BUK0 85 aa10.71□□□□□ -0.69
LIME1-209ENST00000494776 NUP35Q8NFH5 326 aa10.7□□□□□ -0.7
LIME1-209ENST00000494776 FRZBQ92765 325 aa10.7□□□□□ -0.7
LIME1-209ENST00000494776 TM2D2Q9BX73 214 aa10.7□□□□□ -0.7
LIME1-209ENST00000494776 KLK12Q9UKR0 248 aa10.7□□□□□ -0.7
LIME1-209ENST00000494776 IGHV1-24A0A0C4DH33 117 aa10.69□□□□□ -0.7
LIME1-209ENST00000494776 NTM-AS1Q6ZSK4 140 aa10.69□□□□□ -0.7
LIME1-209ENST00000494776 A0A087WTM6 91 aa10.68□□□□□ -0.7
LIME1-209ENST00000494776 IFITM2Q01629 132 aa10.68□□□□□ -0.7
LIME1-209ENST00000494776 GAGE6Q13070 117 aa10.68□□□□□ -0.7
LIME1-209ENST00000494776 RMI2Q96E14 147 aa10.68□□□□□ -0.7
LIME1-209ENST00000494776 TMEM191AQ9H0A3 160 aa10.68□□□□□ -0.7
LIME1-209ENST00000494776 SMIM27A0A1W2PRY6 76 aa10.67□□□□□ -0.7
LIME1-209ENST00000494776 COTL1Q14019 142 aa10.67□□□□□ -0.7
LIME1-209ENST00000494776 IQCJQ1A5X6 159 aa10.67□□□□□ -0.7
LIME1-209ENST00000494776 DEFB104AQ8WTQ1 72 aa10.67□□□□□ -0.7
LIME1-209ENST00000494776 UBE2WQ96B02 151 aa10.67□□□□□ -0.7
LIME1-209ENST00000494776 RPL39LQ96EH5 51 aaKnown RBP10.67□□□□□ -0.7
LIME1-209ENST00000494776 CRPP02741 224 aa10.66□□□□□ -0.7
LIME1-209ENST00000494776 ANGP03950 147 aaKnown RBP10.66□□□□□ -0.7
LIME1-209ENST00000494776 KRTAP10-2P60368 255 aa10.66□□□□□ -0.7
LIME1-209ENST00000494776 Q0VG73 95 aa10.66□□□□□ -0.7
LIME1-209ENST00000494776 MPV17L2Q567V2 206 aa10.66□□□□□ -0.7
LIME1-209ENST00000494776 ATRAIDQ6UW56 229 aa10.66□□□□□ -0.7
LIME1-209ENST00000494776 TMEM243Q9BU79 118 aa10.66□□□□□ -0.7
LIME1-209ENST00000494776 COX11Q9Y6N1 276 aa10.66□□□□□ -0.7
LIME1-209ENST00000494776 PKHD1P08F94 4074 aa10.66□□□□□ -0.7
LIME1-209ENST00000494776 KIAA1109Q2LD37 5005 aa10.66□□□□□ -0.7
LIME1-209ENST00000494776 PKD1P98161 4303 aa10.65□□□□□ -0.7
LIME1-209ENST00000494776 UBE2L6O14933 153 aa10.65□□□□□ -0.7
LIME1-209ENST00000494776 PPP1R2P9O14990 202 aa10.65□□□□□ -0.7
LIME1-209ENST00000494776 PNRC1Q12796 327 aaPredicted RBP10.65□□□□□ -0.7
LIME1-209ENST00000494776 AMN1Q8IY45 258 aa10.65□□□□□ -0.7
LIME1-209ENST00000494776 PGPEP1Q9NXJ5 209 aa10.65□□□□□ -0.7
LIME1-209ENST00000494776 IGKV2D-24A0A075B6R9 120 aa10.64□□□□□ -0.71
LIME1-209ENST00000494776 RAB4AP20338 218 aa10.64□□□□□ -0.71
LIME1-209ENST00000494776 AMTP48728 403 aa10.64□□□□□ -0.71
LIME1-209ENST00000494776 CAMPP49913 170 aa10.64□□□□□ -0.71
LIME1-209ENST00000494776 Q8N976 141 aa10.64□□□□□ -0.71
LIME1-209ENST00000494776 MRAP2Q96G30 205 aa10.64□□□□□ -0.71
LIME1-209ENST00000494776 A0A1B0GW15 77 aa10.63□□□□□ -0.71
LIME1-209ENST00000494776 SDHAF1A6NFY7 115 aa10.63□□□□□ -0.71
LIME1-209ENST00000494776 RBX1P62877 108 aa10.63□□□□□ -0.71
LIME1-209ENST00000494776 UQCC3Q6UW78 93 aa10.63□□□□□ -0.71
LIME1-209ENST00000494776 RNF185Q96GF1 192 aa10.63□□□□□ -0.71
LIME1-209ENST00000494776 ST20Q9HBF5 79 aa10.63□□□□□ -0.71
LIME1-209ENST00000494776 MT-ND4LP03901 98 aa10.62□□□□□ -0.71
LIME1-209ENST00000494776 S100A8P05109 93 aa10.62□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 163.6 ms