RNA–Protein interactions for RNA: ENST00000494728.5

VTI1A-208, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 2

Gene VTI1A, Length 463 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-208ENST00000494728 LINC00528Q8N1L1 170 aa7.61□□□□□ -1.19
VTI1A-208ENST00000494728 KIF25-AS1Q9Y6Z4 181 aa7.61□□□□□ -1.19
VTI1A-208ENST00000494728 URGCP-MRPS24S4R325 110 aa7.61□□□□□ -1.19
VTI1A-208ENST00000494728 A0A087WX48 190 aa7.6□□□□□ -1.19
VTI1A-208ENST00000494728 RBFOX3A6NFN3 312 aa7.6□□□□□ -1.19
VTI1A-208ENST00000494728 IGLV2-8P01709 118 aa7.6□□□□□ -1.19
VTI1A-208ENST00000494728 OR5AL1P0C617 328 aa7.6□□□□□ -1.19
VTI1A-208ENST00000494728 RAB4BP61018 213 aa7.6□□□□□ -1.19
VTI1A-208ENST00000494728 TMUB2Q71RG4 321 aa7.6□□□□□ -1.19
VTI1A-208ENST00000494728 Q8N976 141 aa7.6□□□□□ -1.19
VTI1A-208ENST00000494728 C11orf52Q96A22 123 aa7.6□□□□□ -1.19
VTI1A-208ENST00000494728 KRTAP10-4P60372 401 aaPredicted RBP7.59□□□□□ -1.19
VTI1A-208ENST00000494728 CENPWQ5EE01 88 aa7.59□□□□□ -1.19
VTI1A-208ENST00000494728 AKAP14Q86UN6 197 aa7.59□□□□□ -1.19
VTI1A-208ENST00000494728 TCTE3Q8IZS6 198 aa7.59□□□□□ -1.19
VTI1A-208ENST00000494728 C15orf54Q8N8G6 183 aa7.59□□□□□ -1.19
VTI1A-208ENST00000494728 CHCHD7Q9BUK0 85 aa7.59□□□□□ -1.19
VTI1A-208ENST00000494728 GNG13Q9P2W3 67 aa7.59□□□□□ -1.19
VTI1A-208ENST00000494728 S100A9P06702 114 aaKnown RBP7.58□□□□□ -1.2
VTI1A-208ENST00000494728 IGLC6P0CF74 106 aa7.58□□□□□ -1.2
VTI1A-208ENST00000494728 SPANXN1Q5VSR9 72 aa7.58□□□□□ -1.2
VTI1A-208ENST00000494728 CLPSL2Q6UWE3 100 aa7.58□□□□□ -1.2
VTI1A-208ENST00000494728 RMI2Q96E14 147 aa7.58□□□□□ -1.2
VTI1A-208ENST00000494728 COX11Q9Y6N1 276 aa7.58□□□□□ -1.2
VTI1A-208ENST00000494728 HMCN2Q8NDA2 5059 aa7.58□□□□□ -1.2
VTI1A-208ENST00000494728 TRBV20OR9-2A0A075B6H5 130 aa7.57□□□□□ -1.2
VTI1A-208ENST00000494728 RAB19A4D1S5 217 aa7.57□□□□□ -1.2
VTI1A-208ENST00000494728 TMEM262E9PQX1 116 aa7.57□□□□□ -1.2
VTI1A-208ENST00000494728 AP1S3Q96PC3 154 aa7.57□□□□□ -1.2
VTI1A-208ENST00000494728 MANBALQ9NQG1 85 aa7.57□□□□□ -1.2
VTI1A-208ENST00000494728 VAX2Q9UIW0 290 aa7.57□□□□□ -1.2
VTI1A-208ENST00000494728 TRAV1-1A0A0B4J248 108 aa7.56□□□□□ -1.2
VTI1A-208ENST00000494728 A0A1B0GVG6 124 aa7.56□□□□□ -1.2
VTI1A-208ENST00000494728 C19orf71A6NCJ1 209 aa7.56□□□□□ -1.2
VTI1A-208ENST00000494728 F5H697 171 aa7.56□□□□□ -1.2
VTI1A-208ENST00000494728 LORP23490 312 aaPredicted RBP7.56□□□□□ -1.2
VTI1A-208ENST00000494728 EIF5AP63241 154 aaKnown RBP7.56□□□□□ -1.2
VTI1A-208ENST00000494728 KRTAP26-1Q6PEX3 210 aa7.56□□□□□ -1.2
VTI1A-208ENST00000494728 CIRBP-AS1Q8TBR5 109 aa7.56□□□□□ -1.2
VTI1A-208ENST00000494728 CHCHD5Q9BSY4 110 aa7.56□□□□□ -1.2
VTI1A-208ENST00000494728 TPPP3Q9BW30 176 aa7.56□□□□□ -1.2
VTI1A-208ENST00000494728 C1orf43Q9BWL3 253 aa7.56□□□□□ -1.2
VTI1A-208ENST00000494728 M0QY20 66 aa7.55□□□□□ -1.2
VTI1A-208ENST00000494728 HLA-DQA1P01909 254 aa7.55□□□□□ -1.2
VTI1A-208ENST00000494728 CRPP02741 224 aa7.55□□□□□ -1.2
VTI1A-208ENST00000494728 ANGP03950 147 aaKnown RBP7.55□□□□□ -1.2
VTI1A-208ENST00000494728 MGPP08493 103 aa7.55□□□□□ -1.2
VTI1A-208ENST00000494728 RBX1P62877 108 aa7.55□□□□□ -1.2
VTI1A-208ENST00000494728 GAGE6Q13070 117 aa7.55□□□□□ -1.2
VTI1A-208ENST00000494728 ELOBQ15370 118 aa7.55□□□□□ -1.2
VTI1A-208ENST00000494728 SUMO4Q6EEV6 95 aa7.55□□□□□ -1.2
VTI1A-208ENST00000494728 CHAC1Q9BUX1 264 aa7.55□□□□□ -1.2
VTI1A-208ENST00000494728 USP17L23D6RBM5 183 aa7.54□□□□□ -1.2
VTI1A-208ENST00000494728 PRSS1P07477 247 aa7.54□□□□□ -1.2
VTI1A-208ENST00000494728 Q0VG73 95 aa7.54□□□□□ -1.2
VTI1A-208ENST00000494728 KCNIP4Q6PIL6 250 aa7.54□□□□□ -1.2
VTI1A-208ENST00000494728 FER1L6-AS1Q8NA97 138 aa7.54□□□□□ -1.2
VTI1A-208ENST00000494728 OR2D3Q8NGH3 330 aa7.54□□□□□ -1.2
VTI1A-208ENST00000494728 DEFB104AQ8WTQ1 72 aa7.54□□□□□ -1.2
VTI1A-208ENST00000494728 GFRA4Q9GZZ7 299 aa7.54□□□□□ -1.2
VTI1A-208ENST00000494728 PRR34Q9NV39 138 aa7.54□□□□□ -1.2
VTI1A-208ENST00000494728 PLA2G1BP04054 148 aaKnown RBP7.53□□□□□ -1.2
VTI1A-208ENST00000494728 SULT1A2P50226 295 aa7.53□□□□□ -1.2
VTI1A-208ENST00000494728 MEF2BQ02080 365 aaPredicted RBP7.53□□□□□ -1.2
VTI1A-208ENST00000494728 LINC00269Q8N2A0 174 aa7.53□□□□□ -1.2
VTI1A-208ENST00000494728 PANO1I0J062 215 aa7.52□□□□□ -1.21
VTI1A-208ENST00000494728 SMIM17P0DL12 118 aa7.52□□□□□ -1.21
VTI1A-208ENST00000494728 BCL2P10415 239 aa7.52□□□□□ -1.21
VTI1A-208ENST00000494728 GNG4P50150 75 aa7.52□□□□□ -1.21
VTI1A-208ENST00000494728 NKX2-5P52952 324 aaPredicted RBP7.52□□□□□ -1.21
VTI1A-208ENST00000494728 MIAQ16674 131 aa7.52□□□□□ -1.21
VTI1A-208ENST00000494728 IQCJQ1A5X6 159 aa7.52□□□□□ -1.21
VTI1A-208ENST00000494728 C9orf62Q8N4C0 152 aa7.52□□□□□ -1.21
VTI1A-208ENST00000494728 IGLV10-54A0A075B6I4 117 aa7.51□□□□□ -1.21
VTI1A-208ENST00000494728 TRBV25-1A0A075B6N4 114 aa7.51□□□□□ -1.21
VTI1A-208ENST00000494728 CTRLP40313 264 aa7.51□□□□□ -1.21
VTI1A-208ENST00000494728 EIF5AL1Q6IS14 154 aaKnown RBP7.51□□□□□ -1.21
VTI1A-208ENST00000494728 LYZL1Q6UWQ5 148 aa7.51□□□□□ -1.21
VTI1A-208ENST00000494728 SLC51BQ86UW2 128 aa7.51□□□□□ -1.21
VTI1A-208ENST00000494728 C20orf203Q8NBC4 194 aa7.51□□□□□ -1.21
VTI1A-208ENST00000494728 IGLV4-60A0A075B6I1 120 aa7.5□□□□□ -1.21
VTI1A-208ENST00000494728 IGHV1-24A0A0C4DH33 117 aa7.5□□□□□ -1.21
VTI1A-208ENST00000494728 KRTAP29-1A8MX34 341 aaPredicted RBP7.5□□□□□ -1.21
VTI1A-208ENST00000494728 K7EN84 100 aa7.5□□□□□ -1.21
VTI1A-208ENST00000494728 P01737 135 aa7.5□□□□□ -1.21
VTI1A-208ENST00000494728 RAB5CP51148 216 aa7.5□□□□□ -1.21
VTI1A-208ENST00000494728 HNRNPA3P51991 378 aaKnown RBP7.5□□□□□ -1.21
VTI1A-208ENST00000494728 SMIM12Q96EX1 92 aa7.5□□□□□ -1.21
VTI1A-208ENST00000494728 MED9Q9NWA0 146 aa7.5□□□□□ -1.21
VTI1A-208ENST00000494728 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.5□□□□□ -1.21
VTI1A-208ENST00000494728 TRAV26-2A0A0B4J265 109 aa7.49□□□□□ -1.21
VTI1A-208ENST00000494728 PDE6DO43924 150 aa7.49□□□□□ -1.21
VTI1A-208ENST00000494728 NTF3P20783 257 aa7.49□□□□□ -1.21
VTI1A-208ENST00000494728 RPS20P60866 119 aaKnown RBP7.49□□□□□ -1.21
VTI1A-208ENST00000494728 CACNG7P62955 275 aa7.49□□□□□ -1.21
VTI1A-208ENST00000494728 REG3AQ06141 175 aa7.49□□□□□ -1.21
VTI1A-208ENST00000494728 C14orf177Q52M58 125 aa7.49□□□□□ -1.21
VTI1A-208ENST00000494728 TMEM97Q5BJF2 176 aa7.49□□□□□ -1.21
VTI1A-208ENST00000494728 RASL11AQ6T310 242 aa7.49□□□□□ -1.21
VTI1A-208ENST00000494728 NUDT10Q8NFP7 164 aa7.49□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 91.7 ms