RNA–Protein interactions for RNA: ENST00000493952.2

SATB1-217, Transcript of SATB homeobox 1, humanhuman

TSL 3 BASIC

Gene SATB1, Length 626 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SATB1-217ENST00000493952 DPH3P1Q9H4G8 78 aa10.86□□□□□ -0.67
SATB1-217ENST00000493952 A8MWL6 223 aa10.85□□□□□ -0.67
SATB1-217ENST00000493952 M0QY20 66 aa10.85□□□□□ -0.67
SATB1-217ENST00000493952 PEA15Q15121 130 aa10.85□□□□□ -0.67
SATB1-217ENST00000493952 SPATA12Q7Z6I5 190 aa10.85□□□□□ -0.67
SATB1-217ENST00000493952 Q9HAA7 133 aa10.85□□□□□ -0.67
SATB1-217ENST00000493952 KRTAP10-2P60368 255 aa10.84□□□□□ -0.67
SATB1-217ENST00000493952 FAM74A3Q4VXF1 159 aa10.84□□□□□ -0.67
SATB1-217ENST00000493952 DAZ4Q86SG3 579 aaKnown RBP10.84□□□□□ -0.67
SATB1-217ENST00000493952 NIT1Q86X76 327 aa10.84□□□□□ -0.67
SATB1-217ENST00000493952 DAZ3Q9NR90 486 aaKnown RBP10.84□□□□□ -0.67
SATB1-217ENST00000493952 OSTCQ9NRP0 149 aa10.84□□□□□ -0.67
SATB1-217ENST00000493952 TRBV6-8A0A0A6YYG3 113 aa10.83□□□□□ -0.68
SATB1-217ENST00000493952 C16orf90A8MZG2 172 aa10.83□□□□□ -0.68
SATB1-217ENST00000493952 H7C1H1 209 aa10.83□□□□□ -0.68
SATB1-217ENST00000493952 RPL23P62829 140 aaKnown RBP10.83□□□□□ -0.68
SATB1-217ENST00000493952 LAGE3Q14657 143 aa10.83□□□□□ -0.68
SATB1-217ENST00000493952 TMEM241Q24JQ0 296 aa10.83□□□□□ -0.68
SATB1-217ENST00000493952 ISOC2Q96AB3 205 aa10.83□□□□□ -0.68
SATB1-217ENST00000493952 PGLYRP4Q96LB8 373 aa10.83□□□□□ -0.68
SATB1-217ENST00000493952 DNAJC30Q96LL9 226 aa10.83□□□□□ -0.68
SATB1-217ENST00000493952 SMDT1Q9H4I9 107 aa10.83□□□□□ -0.68
SATB1-217ENST00000493952 FOXA3P55318 350 aaPredicted RBP10.82□□□□□ -0.68
SATB1-217ENST00000493952 RASL11AQ6T310 242 aa10.82□□□□□ -0.68
SATB1-217ENST00000493952 SREK1IP1Q8N9Q2 155 aaPredicted RBP10.82□□□□□ -0.68
SATB1-217ENST00000493952 TSKUQ8WUA8 353 aa10.82□□□□□ -0.68
SATB1-217ENST00000493952 NAT8Q9UHE5 227 aa10.82□□□□□ -0.68
SATB1-217ENST00000493952 URGCP-MRPS24S4R325 110 aa10.82□□□□□ -0.68
SATB1-217ENST00000493952 KIAA1109Q2LD37 5005 aa10.81□□□□□ -0.68
SATB1-217ENST00000493952 A0A087WTM6 91 aa10.81□□□□□ -0.68
SATB1-217ENST00000493952 ADIRFQ15847 76 aa10.81□□□□□ -0.68
SATB1-217ENST00000493952 NTM-AS1Q6ZSK4 140 aa10.81□□□□□ -0.68
SATB1-217ENST00000493952 V9GYV3 84 aa10.81□□□□□ -0.68
SATB1-217ENST00000493952 DNAH5Q8TE73 4624 aa10.81□□□□□ -0.68
SATB1-217ENST00000493952 HIGD1CA8MV81 97 aa10.8□□□□□ -0.68
SATB1-217ENST00000493952 PSCAO43653 123 aa10.8□□□□□ -0.68
SATB1-217ENST00000493952 C15orf54Q8N8G6 183 aa10.8□□□□□ -0.68
SATB1-217ENST00000493952 GFRA4Q9GZZ7 299 aa10.8□□□□□ -0.68
SATB1-217ENST00000493952 A0A087WX48 190 aa10.79□□□□□ -0.68
SATB1-217ENST00000493952 TRAV26-2A0A0B4J265 109 aa10.79□□□□□ -0.68
SATB1-217ENST00000493952 EREGO14944 169 aa10.79□□□□□ -0.68
SATB1-217ENST00000493952 TMEM97Q5BJF2 176 aa10.79□□□□□ -0.68
SATB1-217ENST00000493952 GATD1Q8NB37 220 aa10.79□□□□□ -0.68
SATB1-217ENST00000493952 CHCHD7Q9BUK0 85 aa10.79□□□□□ -0.68
SATB1-217ENST00000493952 NIT2Q9NQR4 276 aa10.79□□□□□ -0.68
SATB1-217ENST00000493952 TRAV8-3A0A0A6YYJ7 113 aa10.78□□□□□ -0.68
SATB1-217ENST00000493952 FAM231BA6NCW3 169 aa10.78□□□□□ -0.68
SATB1-217ENST00000493952 FUSP35637 526 aaKnown RBP eCLIP10.78□□□□□ -0.68
SATB1-217ENST00000493952 SMIM15Q7Z3B0 74 aa10.78□□□□□ -0.68
SATB1-217ENST00000493952 BORCS7Q96B45 105 aa10.78□□□□□ -0.68
SATB1-217ENST00000493952 CHCHD5Q9BSY4 110 aa10.78□□□□□ -0.68
SATB1-217ENST00000493952 KLK12Q9UKR0 248 aa10.78□□□□□ -0.68
SATB1-217ENST00000493952 LRP1BQ9NZR2 4599 aa10.77□□□□□ -0.69
SATB1-217ENST00000493952 A0A1B0GUT8 65 aa10.77□□□□□ -0.69
SATB1-217ENST00000493952 LRCOL1A6NCL2 159 aa10.77□□□□□ -0.69
SATB1-217ENST00000493952 TMEM262E9PQX1 116 aa10.77□□□□□ -0.69
SATB1-217ENST00000493952 RAB14P61106 215 aa10.77□□□□□ -0.69
SATB1-217ENST00000493952 MPV17L2Q567V2 206 aa10.77□□□□□ -0.69
SATB1-217ENST00000493952 KCNIP4Q6PIL6 250 aa10.77□□□□□ -0.69
SATB1-217ENST00000493952 HERC2O95714 4834 aa10.76□□□□□ -0.69
SATB1-217ENST00000493952 TRBV25-1A0A075B6N4 114 aa10.76□□□□□ -0.69
SATB1-217ENST00000493952 NUP35Q8NFH5 326 aa10.76□□□□□ -0.69
SATB1-217ENST00000493952 RPL39LQ96EH5 51 aaKnown RBP10.76□□□□□ -0.69
SATB1-217ENST00000493952 ELOBQ15370 118 aa10.75□□□□□ -0.69
SATB1-217ENST00000493952 IQCJQ1A5X6 159 aa10.75□□□□□ -0.69
SATB1-217ENST00000493952 Q8N976 141 aa10.75□□□□□ -0.69
SATB1-217ENST00000493952 FRZBQ92765 325 aa10.75□□□□□ -0.69
SATB1-217ENST00000493952 UBE2WQ96B02 151 aa10.75□□□□□ -0.69
SATB1-217ENST00000493952 TM2D2Q9BX73 214 aa10.75□□□□□ -0.69
SATB1-217ENST00000493952 IGHV1-24A0A0C4DH33 117 aa10.74□□□□□ -0.69
SATB1-217ENST00000493952 GAGE6Q13070 117 aa10.74□□□□□ -0.69
SATB1-217ENST00000493952 CLLU1Q5K131 121 aa10.74□□□□□ -0.69
SATB1-217ENST00000493952 ATRAIDQ6UW56 229 aa10.74□□□□□ -0.69
SATB1-217ENST00000493952 DEFB104AQ8WTQ1 72 aa10.74□□□□□ -0.69
SATB1-217ENST00000493952 TMEM191AQ9H0A3 160 aa10.74□□□□□ -0.69
SATB1-217ENST00000493952 PGPEP1Q9NXJ5 209 aa10.74□□□□□ -0.69
SATB1-217ENST00000493952 NAT8BQ9UHF3 227 aa10.74□□□□□ -0.69
SATB1-217ENST00000493952 PKIAP61925 76 aa10.73□□□□□ -0.69
SATB1-217ENST00000493952 IFITM2Q01629 132 aa10.73□□□□□ -0.69
SATB1-217ENST00000493952 CDPF1Q6NVV7 123 aa10.73□□□□□ -0.69
SATB1-217ENST00000493952 SMIM27A0A1W2PRY6 76 aa10.72□□□□□ -0.69
SATB1-217ENST00000493952 GAS8-AS1O95177 125 aa10.72□□□□□ -0.69
SATB1-217ENST00000493952 ANGP03950 147 aaKnown RBP10.72□□□□□ -0.69
SATB1-217ENST00000493952 WFDC2Q14508 124 aa10.72□□□□□ -0.69
SATB1-217ENST00000493952 MAPKAPK5-AS1Q8N8E1 139 aa10.72□□□□□ -0.69
SATB1-217ENST00000493952 RMI2Q96E14 147 aa10.72□□□□□ -0.69
SATB1-217ENST00000493952 RNF185Q96GF1 192 aa10.72□□□□□ -0.69
SATB1-217ENST00000493952 IGKV2D-24A0A075B6R9 120 aa10.71□□□□□ -0.69
SATB1-217ENST00000493952 RBX1P62877 108 aa10.71□□□□□ -0.69
SATB1-217ENST00000493952 RIGQ13278 110 aa10.71□□□□□ -0.69
SATB1-217ENST00000493952 COTL1Q14019 142 aa10.71□□□□□ -0.69
SATB1-217ENST00000493952 ENHOQ6UWT2 76 aa10.71□□□□□ -0.69
SATB1-217ENST00000493952 AMN1Q8IY45 258 aa10.71□□□□□ -0.69
SATB1-217ENST00000493952 Q8N814 137 aa10.71□□□□□ -0.69
SATB1-217ENST00000493952 TMEM243Q9BU79 118 aa10.71□□□□□ -0.69
SATB1-217ENST00000493952 CDK2AP2O75956 126 aa10.7□□□□□ -0.7
SATB1-217ENST00000493952 CRPP02741 224 aa10.7□□□□□ -0.7
SATB1-217ENST00000493952 RAB4AP20338 218 aa10.7□□□□□ -0.7
SATB1-217ENST00000493952 Q0VG73 95 aa10.7□□□□□ -0.7
SATB1-217ENST00000493952 COX11Q9Y6N1 276 aa10.7□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 67.9 ms