RNA–Protein interactions for RNA: ENST00000493903.1

GTF3A-208, Transcript of general transcription factor IIIA, humanhuman

TSL 3

Gene GTF3A, Length 748 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-208ENST00000493903 CHD3Q12873 2000 aaKnown RBP2.11□□□□□ -2.07
GTF3A-208ENST00000493903 MGAM2Q2M2H8 2515 aa2.1□□□□□ -2.07
GTF3A-208ENST00000493903 TRAV3A0A0B4J244 114 aa2.1□□□□□ -2.07
GTF3A-208ENST00000493903 LOC107984640A0A0U1RRK4 108 aa2.1□□□□□ -2.07
GTF3A-208ENST00000493903 UQCRHP07919 91 aa2.1□□□□□ -2.07
GTF3A-208ENST00000493903 ASAH2BP0C7U1 165 aa2.1□□□□□ -2.07
GTF3A-208ENST00000493903 KDELR1P24390 212 aa2.1□□□□□ -2.07
GTF3A-208ENST00000493903 AKR1C3P42330 323 aa2.1□□□□□ -2.07
GTF3A-208ENST00000493903 SRP9P49458 86 aaKnown RBP2.1□□□□□ -2.07
GTF3A-208ENST00000493903 CKS1BP61024 79 aa2.1□□□□□ -2.07
GTF3A-208ENST00000493903 OR4K15Q8NH41 348 aa2.1□□□□□ -2.07
GTF3A-208ENST00000493903 TSLPQ969D9 159 aa2.1□□□□□ -2.07
GTF3A-208ENST00000493903 RETNLBQ9BQ08 111 aa2.1□□□□□ -2.07
GTF3A-208ENST00000493903 RYR2Q92736 4967 aa2.1□□□□□ -2.07
GTF3A-208ENST00000493903 TENM1Q9UKZ4 2725 aa2.1□□□□□ -2.07
GTF3A-208ENST00000493903 DNAJC13O75165 2243 aa2.09□□□□□ -2.07
GTF3A-208ENST00000493903 TGP01266 2768 aa2.09□□□□□ -2.07
GTF3A-208ENST00000493903 TRBV27A0A0K0K1C4 114 aa2.09□□□□□ -2.07
GTF3A-208ENST00000493903 DPM2O94777 84 aa2.09□□□□□ -2.07
GTF3A-208ENST00000493903 STATHP02808 62 aa2.09□□□□□ -2.07
GTF3A-208ENST00000493903 SSR2P43308 183 aa2.09□□□□□ -2.07
GTF3A-208ENST00000493903 ROMO1P60602 79 aa2.09□□□□□ -2.07
GTF3A-208ENST00000493903 RNASE10Q5GAN6 216 aaKnown RBP2.09□□□□□ -2.07
GTF3A-208ENST00000493903 RPS19BP1Q86WX3 136 aaKnown RBP2.09□□□□□ -2.07
GTF3A-208ENST00000493903 PLPP5Q8NEB5 264 aa2.09□□□□□ -2.07
GTF3A-208ENST00000493903 CHCHD1Q96BP2 118 aaKnown RBP2.09□□□□□ -2.07
GTF3A-208ENST00000493903 EPPK1P58107 5090 aaKnown RBP2.09□□□□□ -2.08
GTF3A-208ENST00000493903 KIAA1549Q9HCM3 1950 aa2.09□□□□□ -2.08
GTF3A-208ENST00000493903 CR1P17927 2039 aa2.08□□□□□ -2.08
GTF3A-208ENST00000493903 A0A096LNT2 108 aa2.08□□□□□ -2.08
GTF3A-208ENST00000493903 TRAV13-1A0A0B4J241 112 aa2.08□□□□□ -2.08
GTF3A-208ENST00000493903 TRAV12-1A0A0B4J245 112 aa2.08□□□□□ -2.08
GTF3A-208ENST00000493903 DEFB108AA8MXU0 73 aa2.08□□□□□ -2.08
GTF3A-208ENST00000493903 H3BMG7 143 aa2.08□□□□□ -2.08
GTF3A-208ENST00000493903 LYRM1O43325 122 aa2.08□□□□□ -2.08
GTF3A-208ENST00000493903 CMPK1P30085 196 aa2.08□□□□□ -2.08
GTF3A-208ENST00000493903 RAB5CP51148 216 aa2.08□□□□□ -2.08
GTF3A-208ENST00000493903 PDE6HQ13956 83 aa2.08□□□□□ -2.08
GTF3A-208ENST00000493903 SMIM21Q3B7S5 101 aa2.08□□□□□ -2.08
GTF3A-208ENST00000493903 TCTE3Q8IZS6 198 aa2.08□□□□□ -2.08
GTF3A-208ENST00000493903 LINC00311Q8N616 119 aa2.08□□□□□ -2.08
GTF3A-208ENST00000493903 FAM216BQ8N7L0 139 aa2.08□□□□□ -2.08
GTF3A-208ENST00000493903 OR4B1Q8NGF8 309 aa2.08□□□□□ -2.08
GTF3A-208ENST00000493903 DIRC1Q969H9 104 aa2.08□□□□□ -2.08
GTF3A-208ENST00000493903 ZC2HC1AQ96GY0 325 aa2.08□□□□□ -2.08
GTF3A-208ENST00000493903 CCL19Q99731 98 aa2.08□□□□□ -2.08
GTF3A-208ENST00000493903 LCE3DQ9BYE3 92 aa2.08□□□□□ -2.08
GTF3A-208ENST00000493903 CBLN4Q9NTU7 201 aa2.08□□□□□ -2.08
GTF3A-208ENST00000493903 TMEM106BQ9NUM4 274 aa2.08□□□□□ -2.08
GTF3A-208ENST00000493903 HEATR5BQ9P2D3 2071 aa2.08□□□□□ -2.08
GTF3A-208ENST00000493903 ABCA1O95477 2261 aa2.07□□□□□ -2.08
GTF3A-208ENST00000493903 C9JAW5 83 aa2.07□□□□□ -2.08
GTF3A-208ENST00000493903 CRYGSP22914 178 aa2.07□□□□□ -2.08
GTF3A-208ENST00000493903 RPL22P35268 128 aaKnown RBP2.07□□□□□ -2.08
GTF3A-208ENST00000493903 BTG2P78543 158 aa2.07□□□□□ -2.08
GTF3A-208ENST00000493903 MRPS36P82909 103 aaKnown RBP2.07□□□□□ -2.08
GTF3A-208ENST00000493903 PLGLB1Q02325 96 aa2.07□□□□□ -2.08
GTF3A-208ENST00000493903 C4orf22Q6V702 233 aa2.07□□□□□ -2.08
GTF3A-208ENST00000493903 OR5A2Q8NGI9 324 aa2.07□□□□□ -2.08
GTF3A-208ENST00000493903 OR5H6Q8NGV6 325 aa2.07□□□□□ -2.08
GTF3A-208ENST00000493903 OR2T35Q8NGX2 323 aa2.07□□□□□ -2.08
GTF3A-208ENST00000493903 PRELID3AQ96N28 172 aa2.07□□□□□ -2.08
GTF3A-208ENST00000493903 PROK2Q9HC23 129 aa2.07□□□□□ -2.08
GTF3A-208ENST00000493903 HSPB8Q9UJY1 196 aa2.07□□□□□ -2.08
GTF3A-208ENST00000493903 HIGD1AQ9Y241 93 aa2.07□□□□□ -2.08
GTF3A-208ENST00000493903 SOX21Q9Y651 276 aaPredicted RBP2.07□□□□□ -2.08
GTF3A-208ENST00000493903 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP2.07□□□□□ -2.082e-14■■■■■ 29.1
GTF3A-208ENST00000493903 PKD1L1Q8TDX9 2849 aa2.07□□□□□ -2.08
GTF3A-208ENST00000493903 USF3Q68DE3 2245 aa2.06□□□□□ -2.08
GTF3A-208ENST00000493903 APOC4-APOC2K7ER74 178 aa2.06□□□□□ -2.08
GTF3A-208ENST00000493903 OR2H2O95918 312 aa2.06□□□□□ -2.08
GTF3A-208ENST00000493903 IGLV1-51P01701 117 aa2.06□□□□□ -2.08
GTF3A-208ENST00000493903 APOC2P02655 101 aa2.06□□□□□ -2.08
GTF3A-208ENST00000493903 MT-ND6P03923 174 aa2.06□□□□□ -2.08
GTF3A-208ENST00000493903 DSCR4P56555 118 aaPredicted RBP2.06□□□□□ -2.08
GTF3A-208ENST00000493903 PSPHP78330 225 aa2.06□□□□□ -2.08
GTF3A-208ENST00000493903 C6orf52Q5T4I8 152 aa2.06□□□□□ -2.08
GTF3A-208ENST00000493903 Q5XG85 94 aa2.06□□□□□ -2.08
GTF3A-208ENST00000493903 KRTAP5-5Q701N2 237 aaPredicted RBP2.06□□□□□ -2.08
GTF3A-208ENST00000493903 MORN4Q8NDC4 146 aa2.06□□□□□ -2.08
GTF3A-208ENST00000493903 OR51A4Q8NGJ6 313 aa2.06□□□□□ -2.08
GTF3A-208ENST00000493903 RNASE11Q8TAA1 199 aaKnown RBP2.06□□□□□ -2.08
GTF3A-208ENST00000493903 TMEM254Q8TBM7 123 aa2.06□□□□□ -2.08
GTF3A-208ENST00000493903 SFT2D1Q8WV19 159 aa2.06□□□□□ -2.08
GTF3A-208ENST00000493903 POP5Q969H6 163 aaKnown RBP2.06□□□□□ -2.08
GTF3A-208ENST00000493903 REG4Q9BYZ8 158 aa2.06□□□□□ -2.08
GTF3A-208ENST00000493903 FAM107BQ9H098 131 aa2.06□□□□□ -2.08
GTF3A-208ENST00000493903 OR5AC2Q9NZP5 309 aa2.06□□□□□ -2.08
GTF3A-208ENST00000493903 PAIP2BQ9ULR5 123 aaKnown RBP2.06□□□□□ -2.08
GTF3A-208ENST00000493903 CHCHD2Q9Y6H1 151 aaPredicted RBP2.06□□□□□ -2.08
GTF3A-208ENST00000493903 NBEAL2Q6ZNJ1 2754 aa2.06□□□□□ -2.08
GTF3A-208ENST00000493903 MED12LQ86YW9 2145 aa2.06□□□□□ -2.08
GTF3A-208ENST00000493903 PCLOQ9Y6V0 5065 aa2.05□□□□□ -2.08
GTF3A-208ENST00000493903 ROS1P08922 2347 aa2.05□□□□□ -2.08
GTF3A-208ENST00000493903 C2orf70A6NJV1 201 aa2.05□□□□□ -2.08
GTF3A-208ENST00000493903 E7EUB6 86 aa2.05□□□□□ -2.08
GTF3A-208ENST00000493903 MPC1LP0DKB6 136 aa2.05□□□□□ -2.08
GTF3A-208ENST00000493903 Q8N814 137 aa2.05□□□□□ -2.08
GTF3A-208ENST00000493903 MAGOHBQ96A72 148 aaKnown RBP2.05□□□□□ -2.08
GTF3A-208ENST00000493903 HYLS1Q96M11 299 aa2.05□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms