RNA–Protein interactions for RNA: ENST00000493815.5

PDLIM7-208, Transcript of PDZ and LIM domain 7, humanhuman

TSL 1 (best)

Gene PDLIM7, Length 1,686 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-208ENST00000493815 RPL36AP83881 106 aaKnown RBP12.29□□□□□ -0.44
PDLIM7-208ENST00000493815 RHEBQ15382 184 aa12.29□□□□□ -0.44
PDLIM7-208ENST00000493815 RPL36ALQ969Q0 106 aaKnown RBP12.29□□□□□ -0.44
PDLIM7-208ENST00000493815 RNF185Q96GF1 192 aa12.29□□□□□ -0.44
PDLIM7-208ENST00000493815 RYR3Q15413 4870 aa12.29□□□□□ -0.44
PDLIM7-208ENST00000493815 IGLV2-18A0A075B6J9 118 aa12.29□□□□□ -0.44
PDLIM7-208ENST00000493815 IGHV3-38A0A0C4DH36 116 aa12.29□□□□□ -0.44
PDLIM7-208ENST00000493815 A0A1B0GXF2 115 aa12.29□□□□□ -0.44
PDLIM7-208ENST00000493815 SH2D6Q7Z4S9 175 aa12.29□□□□□ -0.44
PDLIM7-208ENST00000493815 SVBPQ8N300 66 aa12.29□□□□□ -0.44
PDLIM7-208ENST00000493815 URGCP-MRPS24S4R325 110 aa12.29□□□□□ -0.44
PDLIM7-208ENST00000493815 RAB4AP20338 218 aa12.28□□□□□ -0.44
PDLIM7-208ENST00000493815 UBE2D3P61077 147 aa12.28□□□□□ -0.44
PDLIM7-208ENST00000493815 UBE2D2P62837 147 aa12.28□□□□□ -0.44
PDLIM7-208ENST00000493815 RASL11AQ6T310 242 aa12.28□□□□□ -0.44
PDLIM7-208ENST00000493815 MRPS16Q9Y3D3 137 aaKnown RBP12.28□□□□□ -0.44
PDLIM7-208ENST00000493815 H7C1H1 209 aa12.27□□□□□ -0.45
PDLIM7-208ENST00000493815 RPL39LQ96EH5 51 aaKnown RBP12.27□□□□□ -0.45
PDLIM7-208ENST00000493815 GTSF1LQ9H1H1 148 aa12.27□□□□□ -0.45
PDLIM7-208ENST00000493815 A0A087WWC5 75 aa12.26□□□□□ -0.45
PDLIM7-208ENST00000493815 A0A1B0GW15 77 aa12.26□□□□□ -0.45
PDLIM7-208ENST00000493815 SNAPINO95295 136 aa12.26□□□□□ -0.45
PDLIM7-208ENST00000493815 IMMP2LQ96T52 175 aa12.26□□□□□ -0.45
PDLIM7-208ENST00000493815 TNFRSF18Q9Y5U5 241 aa12.26□□□□□ -0.45
PDLIM7-208ENST00000493815 SMKR1H3BMG3 65 aa12.26□□□□□ -0.45
PDLIM7-208ENST00000493815 NCR2O95944 276 aa12.26□□□□□ -0.45
PDLIM7-208ENST00000493815 KCNIP4Q6PIL6 250 aa12.26□□□□□ -0.45
PDLIM7-208ENST00000493815 ATP5L2Q7Z4Y8 100 aa12.26□□□□□ -0.45
PDLIM7-208ENST00000493815 DEFB104AQ8WTQ1 72 aa12.26□□□□□ -0.45
PDLIM7-208ENST00000493815 BTF3L4Q96K17 158 aa12.26□□□□□ -0.45
PDLIM7-208ENST00000493815 TMEM242Q9NWH2 141 aa12.26□□□□□ -0.45
PDLIM7-208ENST00000493815 M0R2N4 97 aa12.25□□□□□ -0.45
PDLIM7-208ENST00000493815 FAM104BQ5XKR9 115 aa12.25□□□□□ -0.45
PDLIM7-208ENST00000493815 ATRAIDQ6UW56 229 aa12.25□□□□□ -0.45
PDLIM7-208ENST00000493815 WFDC10BQ8IUB3 73 aa12.25□□□□□ -0.45
PDLIM7-208ENST00000493815 Q9H8V8 135 aa12.25□□□□□ -0.45
PDLIM7-208ENST00000493815 NIT2Q9NQR4 276 aa12.25□□□□□ -0.45
PDLIM7-208ENST00000493815 RPS10P46783 165 aaKnown RBP12.24□□□□□ -0.45
PDLIM7-208ENST00000493815 UPK3BQ9BT76 320 aa12.24□□□□□ -0.45
PDLIM7-208ENST00000493815 S100A8P05109 93 aa12.23□□□□□ -0.45
PDLIM7-208ENST00000493815 MRPL51Q4U2R6 128 aaKnown RBP12.23□□□□□ -0.45
PDLIM7-208ENST00000493815 S100PP25815 95 aa12.22□□□□□ -0.45
PDLIM7-208ENST00000493815 TIRAPP58753 221 aa12.22□□□□□ -0.45
PDLIM7-208ENST00000493815 OR10J3Q5JRS4 329 aa12.22□□□□□ -0.45
PDLIM7-208ENST00000493815 DNAJC30Q96LL9 226 aa12.22□□□□□ -0.45
PDLIM7-208ENST00000493815 LELP1Q5T871 98 aa12.22□□□□□ -0.45
PDLIM7-208ENST00000493815 MRAP2Q96G30 205 aa12.22□□□□□ -0.45
PDLIM7-208ENST00000493815 SIVA1O15304 175 aa12.2□□□□□ -0.46
PDLIM7-208ENST00000493815 DAZ4Q86SG3 579 aaKnown RBP12.2□□□□□ -0.46
PDLIM7-208ENST00000493815 DAZ3Q9NR90 486 aaKnown RBP12.2□□□□□ -0.46
PDLIM7-208ENST00000493815 NTM-AS1Q6ZSK4 140 aa12.19□□□□□ -0.46
PDLIM7-208ENST00000493815 DNAH6Q9C0G6 4158 aa12.19□□□□□ -0.46
PDLIM7-208ENST00000493815 TRAV8-6A0A0B4J262 113 aa12.19□□□□□ -0.46
PDLIM7-208ENST00000493815 D6R8Y8 96 aa12.19□□□□□ -0.46
PDLIM7-208ENST00000493815 CKS2P33552 79 aa12.19□□□□□ -0.46
PDLIM7-208ENST00000493815 Q8N3U1 123 aa12.19□□□□□ -0.46
PDLIM7-208ENST00000493815 NRACQ8N912 160 aa12.19□□□□□ -0.46
PDLIM7-208ENST00000493815 SREK1IP1Q8N9Q2 155 aaPredicted RBP12.19□□□□□ -0.46
PDLIM7-208ENST00000493815 FRZBQ92765 325 aa12.19□□□□□ -0.46
PDLIM7-208ENST00000493815 KRTAP1-5Q9BYS1 174 aa12.19□□□□□ -0.46
PDLIM7-208ENST00000493815 TRAV9-1A0A075B6T8 112 aa12.18□□□□□ -0.46
PDLIM7-208ENST00000493815 SDHAF1A6NFY7 115 aa12.18□□□□□ -0.46
PDLIM7-208ENST00000493815 TMEM136Q6ZRR5 245 aa12.18□□□□□ -0.46
PDLIM7-208ENST00000493815 TRBV6-8A0A0A6YYG3 113 aa12.17□□□□□ -0.46
PDLIM7-208ENST00000493815 TGIF2-C20orf24A0A0A6YYL0 155 aa12.17□□□□□ -0.46
PDLIM7-208ENST00000493815 NBDYA0A0U1RRE5 68 aa12.17□□□□□ -0.46
PDLIM7-208ENST00000493815 ST20Q9HBF5 79 aa12.17□□□□□ -0.46
PDLIM7-208ENST00000493815 TRBV6-5A0A0K0K1A5 114 aa12.16□□□□□ -0.46
PDLIM7-208ENST00000493815 IGHV3-30P01768 117 aa12.16□□□□□ -0.46
PDLIM7-208ENST00000493815 IGHV3-33P01772 117 aa12.16□□□□□ -0.46
PDLIM7-208ENST00000493815 IGHV3-30-3P0DP02 117 aa12.16□□□□□ -0.46
PDLIM7-208ENST00000493815 IGHV3-30-5P0DP03 117 aa12.16□□□□□ -0.46
PDLIM7-208ENST00000493815 ELOBQ15370 118 aa12.16□□□□□ -0.46
PDLIM7-208ENST00000493815 Q6ZR54 194 aa12.16□□□□□ -0.46
PDLIM7-208ENST00000493815 CBLN2Q8IUK8 224 aa12.16□□□□□ -0.46
PDLIM7-208ENST00000493815 TMEM70Q9BUB7 260 aa12.15□□□□□ -0.46
PDLIM7-208ENST00000493815 TNFRSF6BO95407 300 aa12.14□□□□□ -0.47
PDLIM7-208ENST00000493815 NPYP01303 97 aa12.14□□□□□ -0.47
PDLIM7-208ENST00000493815 DNAH10OSP0CZ25 163 aa12.14□□□□□ -0.47
PDLIM7-208ENST00000493815 COTL1Q14019 142 aa12.13□□□□□ -0.47
PDLIM7-208ENST00000493815 KIAA1644Q3SXP7 199 aa12.13□□□□□ -0.47
PDLIM7-208ENST00000493815 ORMDL3Q8N138 153 aa12.13□□□□□ -0.47
PDLIM7-208ENST00000493815 CHCHD5Q9BSY4 110 aa12.13□□□□□ -0.47
PDLIM7-208ENST00000493815 PMCHP20382 165 aa12.13□□□□□ -0.47
PDLIM7-208ENST00000493815 POLR2KP53803 58 aaKnown RBP12.13□□□□□ -0.47
PDLIM7-208ENST00000493815 SUMO2P61956 95 aaKnown RBP12.13□□□□□ -0.47
PDLIM7-208ENST00000493815 PRELID3AQ96N28 172 aa12.13□□□□□ -0.47
PDLIM7-208ENST00000493815 TRBV25-1A0A075B6N4 114 aa12.12□□□□□ -0.47
PDLIM7-208ENST00000493815 IGHV1-24A0A0C4DH33 117 aa12.12□□□□□ -0.47
PDLIM7-208ENST00000493815 TMEM262E9PQX1 116 aa12.12□□□□□ -0.47
PDLIM7-208ENST00000493815 I3L3M4 83 aa12.12□□□□□ -0.47
PDLIM7-208ENST00000493815 PPP1R17O96001 155 aa12.12□□□□□ -0.47
PDLIM7-208ENST00000493815 PPBPP02775 128 aa12.12□□□□□ -0.47
PDLIM7-208ENST00000493815 LINC01556Q5JQF7 62 aa12.12□□□□□ -0.47
PDLIM7-208ENST00000493815 NIT1Q86X76 327 aa12.12□□□□□ -0.47
PDLIM7-208ENST00000493815 DNAH2Q9P225 4427 aa12.11□□□□□ -0.47
PDLIM7-208ENST00000493815 TRBV24-1A0A075B6N3 115 aa12.11□□□□□ -0.47
PDLIM7-208ENST00000493815 APCSP02743 223 aa12.11□□□□□ -0.47
PDLIM7-208ENST00000493815 GAGE6Q13070 117 aa12.11□□□□□ -0.47
PDLIM7-208ENST00000493815 IQCJQ1A5X6 159 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 106.1 ms