RNA–Protein interactions for RNA: ENST00000493608.1

COL6A3-214, Transcript of collagen type VI alpha 3 chain, humanhuman

TSL 2

Gene COL6A3, Length 742 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A3-214ENST00000493608 RBFOX3A6NFN3 312 aa7.1□□□□□ -1.27
COL6A3-214ENST00000493608 F5H697 171 aa7.1□□□□□ -1.27
COL6A3-214ENST00000493608 SNAI2O43623 268 aa7.1□□□□□ -1.27
COL6A3-214ENST00000493608 CXCL1P09341 107 aa7.1□□□□□ -1.27
COL6A3-214ENST00000493608 RPL36AP83881 106 aaKnown RBP7.1□□□□□ -1.27
COL6A3-214ENST00000493608 MEF2BQ02080 365 aaPredicted RBP7.1□□□□□ -1.27
COL6A3-214ENST00000493608 Q8N1X5 172 aa7.1□□□□□ -1.27
COL6A3-214ENST00000493608 RPL36ALQ969Q0 106 aaKnown RBP7.1□□□□□ -1.27
COL6A3-214ENST00000493608 DAZAP1Q96EP5 407 aaKnown RBP7.1□□□□□ -1.27
COL6A3-214ENST00000493608 DNAJC30Q96LL9 226 aa7.1□□□□□ -1.27
COL6A3-214ENST00000493608 MED9Q9NWA0 146 aa7.1□□□□□ -1.27
COL6A3-214ENST00000493608 TRBV7-3A0A075B6L6 115 aa7.09□□□□□ -1.27
COL6A3-214ENST00000493608 TRBV10-1A0A0K0K1A3 114 aa7.09□□□□□ -1.27
COL6A3-214ENST00000493608 LECT2O14960 151 aa7.09□□□□□ -1.27
COL6A3-214ENST00000493608 OR5AL1P0C617 328 aa7.09□□□□□ -1.27
COL6A3-214ENST00000493608 GCSHP23434 173 aa7.09□□□□□ -1.27
COL6A3-214ENST00000493608 GNG4P50150 75 aa7.09□□□□□ -1.27
COL6A3-214ENST00000493608 XGP55808 180 aa7.09□□□□□ -1.27
COL6A3-214ENST00000493608 RAB4BP61018 213 aa7.09□□□□□ -1.27
COL6A3-214ENST00000493608 UBE2D3P61077 147 aa7.09□□□□□ -1.27
COL6A3-214ENST00000493608 UBE2D2P62837 147 aa7.09□□□□□ -1.27
COL6A3-214ENST00000493608 WFDC2Q14508 124 aa7.09□□□□□ -1.27
COL6A3-214ENST00000493608 AKAP14Q86UN6 197 aa7.09□□□□□ -1.27
COL6A3-214ENST00000493608 NIT1Q86X76 327 aa7.09□□□□□ -1.27
COL6A3-214ENST00000493608 NEXN-AS1Q8NBZ9 246 aa7.09□□□□□ -1.27
COL6A3-214ENST00000493608 OR2D3Q8NGH3 330 aa7.09□□□□□ -1.27
COL6A3-214ENST00000493608 KLK12Q9UKR0 248 aa7.09□□□□□ -1.27
COL6A3-214ENST00000493608 TRBV20OR9-2A0A075B6H5 130 aa7.08□□□□□ -1.28
COL6A3-214ENST00000493608 IGLV5-52A0A0A0MRZ9 124 aa7.08□□□□□ -1.28
COL6A3-214ENST00000493608 C19orf71A6NCJ1 209 aa7.08□□□□□ -1.28
COL6A3-214ENST00000493608 PDE6DO43924 150 aa7.08□□□□□ -1.28
COL6A3-214ENST00000493608 IFNA1P01562 189 aa7.08□□□□□ -1.28
COL6A3-214ENST00000493608 BCL2P10415 239 aa7.08□□□□□ -1.28
COL6A3-214ENST00000493608 HAMPP81172 84 aa7.08□□□□□ -1.28
COL6A3-214ENST00000493608 LAGE3Q14657 143 aa7.08□□□□□ -1.28
COL6A3-214ENST00000493608 C9orf62Q8N4C0 152 aa7.08□□□□□ -1.28
COL6A3-214ENST00000493608 Q8N814 137 aa7.08□□□□□ -1.28
COL6A3-214ENST00000493608 TM2D2Q9BX73 214 aa7.08□□□□□ -1.28
COL6A3-214ENST00000493608 VAX2Q9UIW0 290 aa7.08□□□□□ -1.28
COL6A3-214ENST00000493608 KIF25-AS1Q9Y6Z4 181 aa7.08□□□□□ -1.28
COL6A3-214ENST00000493608 URGCP-MRPS24S4R325 110 aa7.08□□□□□ -1.28
COL6A3-214ENST00000493608 ABCA13Q86UQ4 5058 aa7.07□□□□□ -1.28
COL6A3-214ENST00000493608 TRAV8-3A0A0A6YYJ7 113 aa7.07□□□□□ -1.28
COL6A3-214ENST00000493608 TMEM262E9PQX1 116 aa7.07□□□□□ -1.28
COL6A3-214ENST00000493608 SMIM17P0DL12 118 aa7.07□□□□□ -1.28
COL6A3-214ENST00000493608 ALKAL2Q6UX46 152 aa7.07□□□□□ -1.28
COL6A3-214ENST00000493608 FER1L6-AS1Q8NA97 138 aa7.07□□□□□ -1.28
COL6A3-214ENST00000493608 OR10G8Q8NGN5 311 aa7.07□□□□□ -1.28
COL6A3-214ENST00000493608 BAALCQ8WXS3 180 aa7.07□□□□□ -1.28
COL6A3-214ENST00000493608 A0A087WX48 190 aa7.06□□□□□ -1.28
COL6A3-214ENST00000493608 P01737 135 aa7.06□□□□□ -1.28
COL6A3-214ENST00000493608 SMR3BP02814 79 aaPredicted RBP7.06□□□□□ -1.28
COL6A3-214ENST00000493608 MGPP08493 103 aa7.06□□□□□ -1.28
COL6A3-214ENST00000493608 IGLC6P0CF74 106 aa7.06□□□□□ -1.28
COL6A3-214ENST00000493608 LYZL1Q6UWQ5 148 aa7.06□□□□□ -1.28
COL6A3-214ENST00000493608 NUDT10Q8NFP7 164 aa7.06□□□□□ -1.28
COL6A3-214ENST00000493608 UBE2WQ96B02 151 aa7.06□□□□□ -1.28
COL6A3-214ENST00000493608 NUDT11Q96G61 164 aa7.06□□□□□ -1.28
COL6A3-214ENST00000493608 IGLV2-33A0A075B6J2 118 aaPredicted RBP7.05□□□□□ -1.28
COL6A3-214ENST00000493608 IGKV2D-24A0A075B6R9 120 aa7.05□□□□□ -1.28
COL6A3-214ENST00000493608 TRBV6-8A0A0A6YYG3 113 aa7.05□□□□□ -1.28
COL6A3-214ENST00000493608 NKX2-5P52952 324 aaPredicted RBP7.05□□□□□ -1.28
COL6A3-214ENST00000493608 RPS20P60866 119 aaKnown RBP7.05□□□□□ -1.28
COL6A3-214ENST00000493608 TOR2AQ5JU69 321 aa7.05□□□□□ -1.28
COL6A3-214ENST00000493608 KCNIP4Q6PIL6 250 aa7.05□□□□□ -1.28
COL6A3-214ENST00000493608 OCC1Q8TAD7 63 aa7.05□□□□□ -1.28
COL6A3-214ENST00000493608 AP1S3Q96PC3 154 aa7.05□□□□□ -1.28
COL6A3-214ENST00000493608 RNASE7Q9H1E1 156 aaKnown RBP7.05□□□□□ -1.28
COL6A3-214ENST00000493608 CDIP1Q9H305 208 aa7.05□□□□□ -1.28
COL6A3-214ENST00000493608 A0A1B0GVG6 124 aa7.04□□□□□ -1.28
COL6A3-214ENST00000493608 C9orf118A6NHY6 69 aa7.04□□□□□ -1.28
COL6A3-214ENST00000493608 K7EN84 100 aa7.04□□□□□ -1.28
COL6A3-214ENST00000493608 NTM-AS1Q6ZSK4 140 aa7.04□□□□□ -1.28
COL6A3-214ENST00000493608 DEFB104AQ8WTQ1 72 aa7.04□□□□□ -1.28
COL6A3-214ENST00000493608 NTN5Q8WTR8 489 aaPredicted RBP7.04□□□□□ -1.28
COL6A3-214ENST00000493608 CHCHD5Q9BSY4 110 aa7.04□□□□□ -1.28
COL6A3-214ENST00000493608 FAM30AQ9NZY2 134 aa7.04□□□□□ -1.28
COL6A3-214ENST00000493608 XKRY2A2RUG3 117 aa7.03□□□□□ -1.28
COL6A3-214ENST00000493608 EPM2AB3EWF7 344 aa7.03□□□□□ -1.28
COL6A3-214ENST00000493608 NTF3P20783 257 aa7.03□□□□□ -1.28
COL6A3-214ENST00000493608 CEBPGP53567 150 aa7.03□□□□□ -1.28
COL6A3-214ENST00000493608 CACNG7P62955 275 aa7.03□□□□□ -1.28
COL6A3-214ENST00000493608 BLOC1S1P78537 153 aa7.03□□□□□ -1.28
COL6A3-214ENST00000493608 MPV17L2Q567V2 206 aa7.03□□□□□ -1.28
COL6A3-214ENST00000493608 C15orf54Q8N8G6 183 aa7.03□□□□□ -1.28
COL6A3-214ENST00000493608 Q8N976 141 aa7.03□□□□□ -1.28
COL6A3-214ENST00000493608 SMIM12Q96EX1 92 aa7.03□□□□□ -1.28
COL6A3-214ENST00000493608 BIN3Q9NQY0 253 aa7.03□□□□□ -1.28
COL6A3-214ENST00000493608 F2Z2F3 143 aa7.02□□□□□ -1.29
COL6A3-214ENST00000493608 M0QY20 66 aa7.02□□□□□ -1.29
COL6A3-214ENST00000493608 ANGP03950 147 aaKnown RBP7.02□□□□□ -1.29
COL6A3-214ENST00000493608 TAGLN2P37802 199 aaKnown RBP7.02□□□□□ -1.29
COL6A3-214ENST00000493608 GAGE6Q13070 117 aa7.02□□□□□ -1.29
COL6A3-214ENST00000493608 ELOBQ15370 118 aa7.02□□□□□ -1.29
COL6A3-214ENST00000493608 LINC01620Q4KN68 170 aa7.02□□□□□ -1.29
COL6A3-214ENST00000493608 SUMO4Q6EEV6 95 aa7.02□□□□□ -1.29
COL6A3-214ENST00000493608 ATRAIDQ6UW56 229 aa7.02□□□□□ -1.29
COL6A3-214ENST00000493608 ENHOQ6UWT2 76 aa7.02□□□□□ -1.29
COL6A3-214ENST00000493608 SREK1IP1Q8N9Q2 155 aaPredicted RBP7.02□□□□□ -1.29
COL6A3-214ENST00000493608 RMI2Q96E14 147 aa7.02□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms