RNA–Protein interactions for RNA: ENST00000493522.6

CTSA-209, Transcript of cathepsin A, humanhuman

TSL 2

Gene CTSA, Length 901 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-209ENST00000493522 UPK3BQ9BT76 320 aa7.97□□□□□ -1.13
CTSA-209ENST00000493522 NAT8BQ9UHF3 227 aa7.97□□□□□ -1.13
CTSA-209ENST00000493522 TRBV10-1A0A0K0K1A3 114 aa7.96□□□□□ -1.14
CTSA-209ENST00000493522 H7C1H1 209 aa7.96□□□□□ -1.14
CTSA-209ENST00000493522 PPP1R2P9O14990 202 aa7.96□□□□□ -1.14
CTSA-209ENST00000493522 FOXA3P55318 350 aaPredicted RBP7.96□□□□□ -1.14
CTSA-209ENST00000493522 LINC00315P59091 139 aa7.96□□□□□ -1.14
CTSA-209ENST00000493522 RPL36AP83881 106 aaKnown RBP7.96□□□□□ -1.14
CTSA-209ENST00000493522 SUMO4Q6EEV6 95 aa7.96□□□□□ -1.14
CTSA-209ENST00000493522 NUP35Q8NFH5 326 aa7.96□□□□□ -1.14
CTSA-209ENST00000493522 RPL36ALQ969Q0 106 aaKnown RBP7.96□□□□□ -1.14
CTSA-209ENST00000493522 Q9UF83 564 aa7.96□□□□□ -1.14
CTSA-209ENST00000493522 LRP1BQ9NZR2 4599 aa7.95□□□□□ -1.14
CTSA-209ENST00000493522 SMIM27A0A1W2PRY6 76 aa7.95□□□□□ -1.14
CTSA-209ENST00000493522 MT-ND4LP03901 98 aa7.95□□□□□ -1.14
CTSA-209ENST00000493522 RIGQ13278 110 aa7.95□□□□□ -1.14
CTSA-209ENST00000493522 NEXN-AS1Q8NBZ9 246 aa7.95□□□□□ -1.14
CTSA-209ENST00000493522 TRBV7-3A0A075B6L6 115 aa7.94□□□□□ -1.14
CTSA-209ENST00000493522 SIVA1O15304 175 aa7.94□□□□□ -1.14
CTSA-209ENST00000493522 TIRAPP58753 221 aa7.94□□□□□ -1.14
CTSA-209ENST00000493522 OR10J3Q5JRS4 329 aa7.94□□□□□ -1.14
CTSA-209ENST00000493522 WFDC10BQ8IUB3 73 aa7.94□□□□□ -1.14
CTSA-209ENST00000493522 ANAPC16Q96DE5 110 aa7.94□□□□□ -1.14
CTSA-209ENST00000493522 SEC11CQ9BY50 192 aa7.94□□□□□ -1.14
CTSA-209ENST00000493522 GTSF1LQ9H1H1 148 aa7.94□□□□□ -1.14
CTSA-209ENST00000493522 Q9H8V8 135 aa7.94□□□□□ -1.14
CTSA-209ENST00000493522 TRAV8-6A0A0B4J262 113 aa7.93□□□□□ -1.14
CTSA-209ENST00000493522 NBDYA0A0U1RRE5 68 aa7.93□□□□□ -1.14
CTSA-209ENST00000493522 M0QY20 66 aa7.93□□□□□ -1.14
CTSA-209ENST00000493522 UBE2D3P61077 147 aa7.93□□□□□ -1.14
CTSA-209ENST00000493522 UBE2D2P62837 147 aa7.93□□□□□ -1.14
CTSA-209ENST00000493522 TTC32Q5I0X7 151 aa7.93□□□□□ -1.14
CTSA-209ENST00000493522 RASL11AQ6T310 242 aa7.93□□□□□ -1.14
CTSA-209ENST00000493522 TRAV26-2A0A0B4J265 109 aa7.92□□□□□ -1.14
CTSA-209ENST00000493522 IGHV3-38A0A0C4DH36 116 aa7.92□□□□□ -1.14
CTSA-209ENST00000493522 LELP1Q5T871 98 aa7.92□□□□□ -1.14
CTSA-209ENST00000493522 MRPL54Q6P161 138 aaKnown RBP7.92□□□□□ -1.14
CTSA-209ENST00000493522 SREK1IP1Q8N9Q2 155 aaPredicted RBP7.92□□□□□ -1.14
CTSA-209ENST00000493522 TMEM191AQ9H0A3 160 aa7.92□□□□□ -1.14
CTSA-209ENST00000493522 TNFRSF18Q9Y5U5 241 aa7.92□□□□□ -1.14
CTSA-209ENST00000493522 CAMPP49913 170 aa7.91□□□□□ -1.14
CTSA-209ENST00000493522 Q6ZR54 194 aa7.91□□□□□ -1.14
CTSA-209ENST00000493522 DNAJC30Q96LL9 226 aa7.91□□□□□ -1.14
CTSA-209ENST00000493522 A0A087WWC5 75 aa7.9□□□□□ -1.14
CTSA-209ENST00000493522 A0A1B0GW15 77 aa7.9□□□□□ -1.14
CTSA-209ENST00000493522 S100A8P05109 93 aa7.9□□□□□ -1.14
CTSA-209ENST00000493522 HBBP68871 147 aa7.9□□□□□ -1.14
CTSA-209ENST00000493522 AMN1Q8IY45 258 aa7.9□□□□□ -1.14
CTSA-209ENST00000493522 GATD1Q8NB37 220 aa7.9□□□□□ -1.14
CTSA-209ENST00000493522 KRTAP1-5Q9BYS1 174 aa7.9□□□□□ -1.14
CTSA-209ENST00000493522 NIT2Q9NQR4 276 aa7.9□□□□□ -1.14
CTSA-209ENST00000493522 CARHSP1Q9Y2V2 147 aaKnown RBP7.9□□□□□ -1.14
CTSA-209ENST00000493522 C10orf91Q5T1B1 145 aa7.89□□□□□ -1.15
CTSA-209ENST00000493522 C1orf134Q5TEV5 83 aa7.89□□□□□ -1.15
CTSA-209ENST00000493522 DAZ4Q86SG3 579 aaKnown RBP7.89□□□□□ -1.15
CTSA-209ENST00000493522 RPL39LQ96EH5 51 aaKnown RBP7.89□□□□□ -1.15
CTSA-209ENST00000493522 DAZ3Q9NR90 486 aaKnown RBP7.89□□□□□ -1.15
CTSA-209ENST00000493522 APOBP04114 4563 aaKnown RBP7.89□□□□□ -1.15
CTSA-209ENST00000493522 DNAH5Q8TE73 4624 aa7.88□□□□□ -1.15
CTSA-209ENST00000493522 A0A1B0GXF2 115 aa7.88□□□□□ -1.15
CTSA-209ENST00000493522 NCR2O95944 276 aa7.88□□□□□ -1.15
CTSA-209ENST00000493522 IGHV3-30P01768 117 aa7.88□□□□□ -1.15
CTSA-209ENST00000493522 IGHV3-33P01772 117 aa7.88□□□□□ -1.15
CTSA-209ENST00000493522 DNAH10OSP0CZ25 163 aa7.88□□□□□ -1.15
CTSA-209ENST00000493522 IGHV3-30-3P0DP02 117 aa7.88□□□□□ -1.15
CTSA-209ENST00000493522 IGHV3-30-5P0DP03 117 aa7.88□□□□□ -1.15
CTSA-209ENST00000493522 SMCPP49901 116 aaPredicted RBP7.88□□□□□ -1.15
CTSA-209ENST00000493522 NDUFA5Q16718 116 aa7.88□□□□□ -1.15
CTSA-209ENST00000493522 ATP5L2Q7Z4Y8 100 aa7.88□□□□□ -1.15
CTSA-209ENST00000493522 MRAP2Q96G30 205 aa7.88□□□□□ -1.15
CTSA-209ENST00000493522 RNF185Q96GF1 192 aa7.88□□□□□ -1.15
CTSA-209ENST00000493522 KRTAP4-5Q9BYR2 181 aa7.88□□□□□ -1.15
CTSA-209ENST00000493522 CTDSP1Q9GZU7 261 aa7.88□□□□□ -1.15
CTSA-209ENST00000493522 TRAV9-2A0A087WT02 112 aa7.87□□□□□ -1.15
CTSA-209ENST00000493522 APOC3P02656 99 aa7.87□□□□□ -1.15
CTSA-209ENST00000493522 RAB4AP20338 218 aa7.87□□□□□ -1.15
CTSA-209ENST00000493522 RHEBQ15382 184 aa7.87□□□□□ -1.15
CTSA-209ENST00000493522 TMEM97Q5BJF2 176 aa7.87□□□□□ -1.15
CTSA-209ENST00000493522 LINC01556Q5JQF7 62 aa7.87□□□□□ -1.15
CTSA-209ENST00000493522 KCNIP4Q6PIL6 250 aa7.87□□□□□ -1.15
CTSA-209ENST00000493522 C6orf223Q8N319 242 aa7.87□□□□□ -1.15
CTSA-209ENST00000493522 CLRN3Q8NCR9 226 aa7.87□□□□□ -1.15
CTSA-209ENST00000493522 FRZBQ92765 325 aa7.87□□□□□ -1.15
CTSA-209ENST00000493522 TRBV6-8A0A0A6YYG3 113 aa7.86□□□□□ -1.15
CTSA-209ENST00000493522 C7orf77A4D0Y5 90 aa7.86□□□□□ -1.15
CTSA-209ENST00000493522 C16orf90A8MZG2 172 aa7.86□□□□□ -1.15
CTSA-209ENST00000493522 SMKR1H3BMG3 65 aa7.86□□□□□ -1.15
CTSA-209ENST00000493522 J3QL48 77 aa7.86□□□□□ -1.15
CTSA-209ENST00000493522 GAS8-AS1O95177 125 aa7.86□□□□□ -1.15
CTSA-209ENST00000493522 MRPL51Q4U2R6 128 aaKnown RBP7.86□□□□□ -1.15
CTSA-209ENST00000493522 FAM104BQ5XKR9 115 aa7.86□□□□□ -1.15
CTSA-209ENST00000493522 Q8N3U1 123 aa7.86□□□□□ -1.15
CTSA-209ENST00000493522 C10orf126Q8N4M7 172 aa7.86□□□□□ -1.15
CTSA-209ENST00000493522 BTF3L4Q96K17 158 aa7.86□□□□□ -1.15
CTSA-209ENST00000493522 IMMP2LQ96T52 175 aa7.86□□□□□ -1.15
CTSA-209ENST00000493522 CHCHD5Q9BSY4 110 aa7.86□□□□□ -1.15
CTSA-209ENST00000493522 RPS10P5Q9NQ39 176 aa7.86□□□□□ -1.15
CTSA-209ENST00000493522 URGCP-MRPS24S4R325 110 aa7.86□□□□□ -1.15
CTSA-209ENST00000493522 HERC1Q15751 4861 aa7.85□□□□□ -1.15
CTSA-209ENST00000493522 TRBV25-1A0A075B6N4 114 aa7.85□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 82.7 ms