RNA–Protein interactions for RNA: ENST00000493348.1

TM4SF1-204, Transcript of transmembrane 4 L six family member 1, humanhuman

TSL 2

Gene TM4SF1, Length 976 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF1-204ENST00000493348 MSRB1Q9NZV6 116 aa5.63□□□□□ -1.51
TM4SF1-204ENST00000493348 URGCP-MRPS24S4R325 110 aa5.63□□□□□ -1.51
TM4SF1-204ENST00000493348 V9GYV3 84 aa5.63□□□□□ -1.51
TM4SF1-204ENST00000493348 A0A1B0GW15 77 aa5.62□□□□□ -1.51
TM4SF1-204ENST00000493348 TMEM218A2RU14 115 aa5.62□□□□□ -1.51
TM4SF1-204ENST00000493348 FOXA3P55318 350 aaPredicted RBP5.62□□□□□ -1.51
TM4SF1-204ENST00000493348 TIRAPP58753 221 aa5.62□□□□□ -1.51
TM4SF1-204ENST00000493348 DNAJC30Q96LL9 226 aa5.62□□□□□ -1.51
TM4SF1-204ENST00000493348 UPK3BQ9BT76 320 aa5.62□□□□□ -1.51
TM4SF1-204ENST00000493348 CNFNQ9BYD5 112 aa5.62□□□□□ -1.51
TM4SF1-204ENST00000493348 NBDYA0A0U1RRE5 68 aa5.61□□□□□ -1.51
TM4SF1-204ENST00000493348 LINC00862A6NCI5 91 aa5.61□□□□□ -1.51
TM4SF1-204ENST00000493348 PKIAP61925 76 aa5.61□□□□□ -1.51
TM4SF1-204ENST00000493348 LELP1Q5T871 98 aa5.61□□□□□ -1.51
TM4SF1-204ENST00000493348 RASL11AQ6T310 242 aa5.61□□□□□ -1.51
TM4SF1-204ENST00000493348 Q6ZSN1 163 aa5.61□□□□□ -1.51
TM4SF1-204ENST00000493348 DAZ4Q86SG3 579 aaKnown RBP5.61□□□□□ -1.51
TM4SF1-204ENST00000493348 Q8N3U1 123 aa5.61□□□□□ -1.51
TM4SF1-204ENST00000493348 C10orf126Q8N4M7 172 aa5.61□□□□□ -1.51
TM4SF1-204ENST00000493348 NUP35Q8NFH5 326 aa5.61□□□□□ -1.51
TM4SF1-204ENST00000493348 SEC11CQ9BY50 192 aa5.61□□□□□ -1.51
TM4SF1-204ENST00000493348 DAZ3Q9NR90 486 aaKnown RBP5.61□□□□□ -1.51
TM4SF1-204ENST00000493348 DNAH6Q9C0G6 4158 aa5.6□□□□□ -1.51
TM4SF1-204ENST00000493348 SMIM27A0A1W2PRY6 76 aa5.6□□□□□ -1.51
TM4SF1-204ENST00000493348 K7EP13 123 aa5.6□□□□□ -1.51
TM4SF1-204ENST00000493348 S100PP25815 95 aa5.6□□□□□ -1.51
TM4SF1-204ENST00000493348 CAMPP49913 170 aa5.6□□□□□ -1.51
TM4SF1-204ENST00000493348 HBBP68871 147 aa5.6□□□□□ -1.51
TM4SF1-204ENST00000493348 C1orf134Q5TEV5 83 aa5.6□□□□□ -1.51
TM4SF1-204ENST00000493348 SUMO4Q6EEV6 95 aa5.6□□□□□ -1.51
TM4SF1-204ENST00000493348 NEXN-AS1Q8NBZ9 246 aa5.6□□□□□ -1.51
TM4SF1-204ENST00000493348 FRZBQ92765 325 aa5.6□□□□□ -1.51
TM4SF1-204ENST00000493348 TMEM191AQ9H0A3 160 aa5.6□□□□□ -1.51
TM4SF1-204ENST00000493348 NIT2Q9NQR4 276 aa5.6□□□□□ -1.51
TM4SF1-204ENST00000493348 KMT2AQ03164 3969 aa5.6□□□□□ -1.51
TM4SF1-204ENST00000493348 TRBV25-1A0A075B6N4 114 aa5.59□□□□□ -1.51
TM4SF1-204ENST00000493348 A0A087WX48 190 aa5.59□□□□□ -1.51
TM4SF1-204ENST00000493348 IGHV3-38A0A0C4DH36 116 aa5.59□□□□□ -1.51
TM4SF1-204ENST00000493348 TMEM262E9PQX1 116 aa5.59□□□□□ -1.51
TM4SF1-204ENST00000493348 PPP1R17O96001 155 aa5.59□□□□□ -1.51
TM4SF1-204ENST00000493348 UBE2D3P61077 147 aa5.59□□□□□ -1.51
TM4SF1-204ENST00000493348 UBE2D2P62837 147 aa5.59□□□□□ -1.51
TM4SF1-204ENST00000493348 MRPL54Q6P161 138 aaKnown RBP5.59□□□□□ -1.51
TM4SF1-204ENST00000493348 ATP5L2Q7Z4Y8 100 aa5.59□□□□□ -1.51
TM4SF1-204ENST00000493348 CTDSP1Q9GZU7 261 aa5.59□□□□□ -1.51
TM4SF1-204ENST00000493348 KIF25-AS1Q9Y6Z4 181 aa5.59□□□□□ -1.51
TM4SF1-204ENST00000493348 HYDINQ4G0P3 5121 aa5.59□□□□□ -1.51
TM4SF1-204ENST00000493348 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.58□□□□□ -1.52
TM4SF1-204ENST00000493348 M0QY20 66 aa5.58□□□□□ -1.52
TM4SF1-204ENST00000493348 UBE2L6O14933 153 aa5.58□□□□□ -1.52
TM4SF1-204ENST00000493348 IGHV3-30P01768 117 aa5.58□□□□□ -1.52
TM4SF1-204ENST00000493348 IGHV3-33P01772 117 aa5.58□□□□□ -1.52
TM4SF1-204ENST00000493348 IGHV3-30-3P0DP02 117 aa5.58□□□□□ -1.52
TM4SF1-204ENST00000493348 IGHV3-30-5P0DP03 117 aa5.58□□□□□ -1.52
TM4SF1-204ENST00000493348 COTL1Q14019 142 aa5.58□□□□□ -1.52
TM4SF1-204ENST00000493348 ELOBQ15370 118 aa5.58□□□□□ -1.52
TM4SF1-204ENST00000493348 LINC00336Q6ZUF6 198 aa5.58□□□□□ -1.52
TM4SF1-204ENST00000493348 NFE4Q86UQ8 179 aa5.58□□□□□ -1.52
TM4SF1-204ENST00000493348 WFDC10BQ8IUB3 73 aa5.58□□□□□ -1.52
TM4SF1-204ENST00000493348 C6orf223Q8N319 242 aa5.58□□□□□ -1.52
TM4SF1-204ENST00000493348 MRAP2Q96G30 205 aa5.58□□□□□ -1.52
TM4SF1-204ENST00000493348 BTF3L4Q96K17 158 aa5.58□□□□□ -1.52
TM4SF1-204ENST00000493348 CHCHD5Q9BSY4 110 aa5.58□□□□□ -1.52
TM4SF1-204ENST00000493348 KRTAP9-2Q9BYQ4 174 aa5.58□□□□□ -1.52
TM4SF1-204ENST00000493348 ST20Q9HBF5 79 aa5.58□□□□□ -1.52
TM4SF1-204ENST00000493348 RYR2Q92736 4967 aa5.58□□□□□ -1.52
TM4SF1-204ENST00000493348 TRAV26-2A0A0B4J265 109 aa5.57□□□□□ -1.52
TM4SF1-204ENST00000493348 IGHV1-24A0A0C4DH33 117 aa5.57□□□□□ -1.52
TM4SF1-204ENST00000493348 SNAPINO95295 136 aa5.57□□□□□ -1.52
TM4SF1-204ENST00000493348 APOC3P02656 99 aa5.57□□□□□ -1.52
TM4SF1-204ENST00000493348 LINC00694P0DN24 101 aa5.57□□□□□ -1.52
TM4SF1-204ENST00000493348 BTF3P20290 206 aaKnown RBP5.57□□□□□ -1.52
TM4SF1-204ENST00000493348 PMCHP20382 165 aa5.57□□□□□ -1.52
TM4SF1-204ENST00000493348 CKS2P33552 79 aa5.57□□□□□ -1.52
TM4SF1-204ENST00000493348 LINC00315P59091 139 aa5.57□□□□□ -1.52
TM4SF1-204ENST00000493348 RHEBQ15382 184 aa5.57□□□□□ -1.52
TM4SF1-204ENST00000493348 AMN1Q8IY45 258 aa5.57□□□□□ -1.52
TM4SF1-204ENST00000493348 IMMP2LQ96T52 175 aa5.57□□□□□ -1.52
TM4SF1-204ENST00000493348 RPS10P5Q9NQ39 176 aa5.57□□□□□ -1.52
TM4SF1-204ENST00000493348 TRBV6-8A0A0A6YYG3 113 aa5.56□□□□□ -1.52
TM4SF1-204ENST00000493348 EREGO14944 169 aa5.56□□□□□ -1.52
TM4SF1-204ENST00000493348 PSCAO43653 123 aa5.56□□□□□ -1.52
TM4SF1-204ENST00000493348 CRPP02741 224 aa5.56□□□□□ -1.52
TM4SF1-204ENST00000493348 DNAH10OSP0CZ25 163 aa5.56□□□□□ -1.52
TM4SF1-204ENST00000493348 ADCYAP1P18509 176 aa5.56□□□□□ -1.52
TM4SF1-204ENST00000493348 TNP2Q05952 138 aa5.56□□□□□ -1.52
TM4SF1-204ENST00000493348 LINC01556Q5JQF7 62 aa5.56□□□□□ -1.52
TM4SF1-204ENST00000493348 Q6ZR54 194 aa5.56□□□□□ -1.52
TM4SF1-204ENST00000493348 SVBPQ8N300 66 aa5.56□□□□□ -1.52
TM4SF1-204ENST00000493348 GATD1Q8NB37 220 aa5.56□□□□□ -1.52
TM4SF1-204ENST00000493348 RMI2Q96E14 147 aa5.56□□□□□ -1.52
TM4SF1-204ENST00000493348 CHCHD7Q9BUK0 85 aa5.56□□□□□ -1.52
TM4SF1-204ENST00000493348 Q9UF83 564 aa5.56□□□□□ -1.52
TM4SF1-204ENST00000493348 RYR3Q15413 4870 aa5.56□□□□□ -1.52
TM4SF1-204ENST00000493348 SDHAF1A6NFY7 115 aa5.55□□□□□ -1.52
TM4SF1-204ENST00000493348 I3L3M4 83 aa5.55□□□□□ -1.52
TM4SF1-204ENST00000493348 APCSP02743 223 aa5.55□□□□□ -1.52
TM4SF1-204ENST00000493348 RAB4AP20338 218 aa5.55□□□□□ -1.52
TM4SF1-204ENST00000493348 FCER1GP30273 86 aa5.55□□□□□ -1.52
TM4SF1-204ENST00000493348 AMTP48728 403 aa5.55□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 59.3 ms