RNA–Protein interactions for RNA: ENST00000492728.1

CHD1L-209, Transcript of chromodomain helicase DNA binding protein 1 like, humanhuman

TSL 2

Gene CHD1L, Length 662 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1L-209ENST00000492728 Q6ZNX1 250 aa12.06□□□□□ -0.48
CHD1L-209ENST00000492728 NTM-AS1Q6ZSK4 140 aa12.06□□□□□ -0.48
CHD1L-209ENST00000492728 GNG13Q9P2W3 67 aa12.06□□□□□ -0.48
CHD1L-209ENST00000492728 SCXQ7RTU7 201 aa12.05□□□□□ -0.48
CHD1L-209ENST00000492728 LINC00528Q8N1L1 170 aa12.05□□□□□ -0.48
CHD1L-209ENST00000492728 C15orf54Q8N8G6 183 aa12.05□□□□□ -0.48
CHD1L-209ENST00000492728 CENPWQ5EE01 88 aa12.04□□□□□ -0.48
CHD1L-209ENST00000492728 Q8N976 141 aa12.04□□□□□ -0.48
CHD1L-209ENST00000492728 LRP1Q07954 4544 aaKnown RBP12.04□□□□□ -0.48
CHD1L-209ENST00000492728 TMEM262E9PQX1 116 aa12.03□□□□□ -0.48
CHD1L-209ENST00000492728 IGLC6P0CF74 106 aa12.03□□□□□ -0.48
CHD1L-209ENST00000492728 MANBALQ9NQG1 85 aa12.03□□□□□ -0.48
CHD1L-209ENST00000492728 VAX2Q9UIW0 290 aa12.03□□□□□ -0.48
CHD1L-209ENST00000492728 TRAV1-1A0A0B4J248 108 aa12.02□□□□□ -0.49
CHD1L-209ENST00000492728 RAB19A4D1S5 217 aa12.02□□□□□ -0.49
CHD1L-209ENST00000492728 EIF5AP63241 154 aaKnown RBP12.02□□□□□ -0.49
CHD1L-209ENST00000492728 ELOBQ15370 118 aa12.02□□□□□ -0.49
CHD1L-209ENST00000492728 AP1S3Q96PC3 154 aa12.02□□□□□ -0.49
CHD1L-209ENST00000492728 TRBV20OR9-2A0A075B6H5 130 aa12.01□□□□□ -0.49
CHD1L-209ENST00000492728 C19orf71A6NCJ1 209 aa12.01□□□□□ -0.49
CHD1L-209ENST00000492728 F5H697 171 aa12.01□□□□□ -0.49
CHD1L-209ENST00000492728 KRTAP10-4P60372 401 aaPredicted RBP12.01□□□□□ -0.49
CHD1L-209ENST00000492728 Q0VG73 95 aa12.01□□□□□ -0.49
CHD1L-209ENST00000492728 KCNIP4Q6PIL6 250 aa12.01□□□□□ -0.49
CHD1L-209ENST00000492728 CHCHD5Q9BSY4 110 aa12.01□□□□□ -0.49
CHD1L-209ENST00000492728 A0A1B0GVG6 124 aa12□□□□□ -0.49
CHD1L-209ENST00000492728 ANGP03950 147 aaKnown RBP12□□□□□ -0.49
CHD1L-209ENST00000492728 TPPP3Q9BW30 176 aa12□□□□□ -0.49
CHD1L-209ENST00000492728 C1orf43Q9BWL3 253 aa12□□□□□ -0.49
CHD1L-209ENST00000492728 CRPP02741 224 aa11.99□□□□□ -0.49
CHD1L-209ENST00000492728 SUMO4Q6EEV6 95 aa11.99□□□□□ -0.49
CHD1L-209ENST00000492728 CLPSL2Q6UWE3 100 aa11.99□□□□□ -0.49
CHD1L-209ENST00000492728 FER1L6-AS1Q8NA97 138 aa11.99□□□□□ -0.49
CHD1L-209ENST00000492728 OR2D3Q8NGH3 330 aa11.99□□□□□ -0.49
CHD1L-209ENST00000492728 CIRBP-AS1Q8TBR5 109 aa11.99□□□□□ -0.49
CHD1L-209ENST00000492728 FAT3Q8TDW7 4589 aa11.99□□□□□ -0.49
CHD1L-209ENST00000492728 M0QY20 66 aa11.98□□□□□ -0.49
CHD1L-209ENST00000492728 MGPP08493 103 aa11.98□□□□□ -0.49
CHD1L-209ENST00000492728 SULT1A2P50226 295 aa11.98□□□□□ -0.49
CHD1L-209ENST00000492728 RBX1P62877 108 aa11.98□□□□□ -0.49
CHD1L-209ENST00000492728 GAGE6Q13070 117 aa11.98□□□□□ -0.49
CHD1L-209ENST00000492728 KRTAP26-1Q6PEX3 210 aa11.98□□□□□ -0.49
CHD1L-209ENST00000492728 CHAC1Q9BUX1 264 aa11.98□□□□□ -0.49
CHD1L-209ENST00000492728 PRR34Q9NV39 138 aa11.98□□□□□ -0.49
CHD1L-209ENST00000492728 USP17L23D6RBM5 183 aa11.97□□□□□ -0.49
CHD1L-209ENST00000492728 HLA-DQA1P01909 254 aa11.97□□□□□ -0.49
CHD1L-209ENST00000492728 PLA2G1BP04054 148 aaKnown RBP11.97□□□□□ -0.49
CHD1L-209ENST00000492728 SMIM17P0DL12 118 aa11.97□□□□□ -0.49
CHD1L-209ENST00000492728 RAB5CP51148 216 aa11.97□□□□□ -0.49
CHD1L-209ENST00000492728 MEF2BQ02080 365 aaPredicted RBP11.97□□□□□ -0.49
CHD1L-209ENST00000492728 GNG4P50150 75 aa11.95□□□□□ -0.5
CHD1L-209ENST00000492728 IQCJQ1A5X6 159 aa11.95□□□□□ -0.5
CHD1L-209ENST00000492728 LINC00269Q8N2A0 174 aa11.95□□□□□ -0.5
CHD1L-209ENST00000492728 TRBV25-1A0A075B6N4 114 aa11.94□□□□□ -0.5
CHD1L-209ENST00000492728 PRSS1P07477 247 aa11.94□□□□□ -0.5
CHD1L-209ENST00000492728 BCL2P10415 239 aa11.94□□□□□ -0.5
CHD1L-209ENST00000492728 RPS20P60866 119 aaKnown RBP11.94□□□□□ -0.5
CHD1L-209ENST00000492728 MIAQ16674 131 aa11.94□□□□□ -0.5
CHD1L-209ENST00000492728 TMEM97Q5BJF2 176 aa11.94□□□□□ -0.5
CHD1L-209ENST00000492728 TCTE3Q8IZS6 198 aa11.94□□□□□ -0.5
CHD1L-209ENST00000492728 DEFB104AQ8WTQ1 72 aa11.94□□□□□ -0.5
CHD1L-209ENST00000492728 SMIM12Q96EX1 92 aa11.94□□□□□ -0.5
CHD1L-209ENST00000492728 NKX2-5P52952 324 aaPredicted RBP11.93□□□□□ -0.5
CHD1L-209ENST00000492728 LYZL1Q6UWQ5 148 aa11.93□□□□□ -0.5
CHD1L-209ENST00000492728 SREK1IP1Q8N9Q2 155 aaPredicted RBP11.93□□□□□ -0.5
CHD1L-209ENST00000492728 DAZAP1Q96EP5 407 aaKnown RBP11.93□□□□□ -0.5
CHD1L-209ENST00000492728 GFRA4Q9GZZ7 299 aa11.93□□□□□ -0.5
CHD1L-209ENST00000492728 MED9Q9NWA0 146 aa11.93□□□□□ -0.5
CHD1L-209ENST00000492728 PKHD1L1Q86WI1 4243 aa11.93□□□□□ -0.5
CHD1L-209ENST00000492728 PDE6DO43924 150 aa11.92□□□□□ -0.5
CHD1L-209ENST00000492728 P01737 135 aa11.92□□□□□ -0.5
CHD1L-209ENST00000492728 PKIAP61925 76 aa11.92□□□□□ -0.5
CHD1L-209ENST00000492728 CACNG7P62955 275 aa11.92□□□□□ -0.5
CHD1L-209ENST00000492728 C14orf177Q52M58 125 aa11.92□□□□□ -0.5
CHD1L-209ENST00000492728 C20orf203Q8NBC4 194 aa11.92□□□□□ -0.5
CHD1L-209ENST00000492728 IGHV1-24A0A0C4DH33 117 aa11.91□□□□□ -0.5
CHD1L-209ENST00000492728 J3QL48 77 aa11.91□□□□□ -0.5
CHD1L-209ENST00000492728 EIF5AL1Q6IS14 154 aaKnown RBP11.91□□□□□ -0.5
CHD1L-209ENST00000492728 IGLV4-60A0A075B6I1 120 aa11.9□□□□□ -0.5
CHD1L-209ENST00000492728 IGLV10-54A0A075B6I4 117 aa11.9□□□□□ -0.5
CHD1L-209ENST00000492728 KRTAP29-1A8MX34 341 aaPredicted RBP11.9□□□□□ -0.5
CHD1L-209ENST00000492728 TEX46H3BTG2 121 aa11.9□□□□□ -0.5
CHD1L-209ENST00000492728 PANO1I0J062 215 aa11.9□□□□□ -0.5
CHD1L-209ENST00000492728 K7EN84 100 aa11.9□□□□□ -0.5
CHD1L-209ENST00000492728 NTF3P20783 257 aa11.9□□□□□ -0.5
CHD1L-209ENST00000492728 CTRLP40313 264 aa11.9□□□□□ -0.5
CHD1L-209ENST00000492728 RASL11AQ6T310 242 aa11.9□□□□□ -0.5
CHD1L-209ENST00000492728 NUDT10Q8NFP7 164 aa11.9□□□□□ -0.5
CHD1L-209ENST00000492728 NUDT11Q96G61 164 aa11.9□□□□□ -0.5
CHD1L-209ENST00000492728 hCG_2014768A0A024R1R8 64 aa11.89□□□□□ -0.51
CHD1L-209ENST00000492728 F2Z2F3 143 aa11.89□□□□□ -0.51
CHD1L-209ENST00000492728 H7C1H1 209 aa11.89□□□□□ -0.51
CHD1L-209ENST00000492728 IFNA1P01562 189 aa11.89□□□□□ -0.51
CHD1L-209ENST00000492728 SLC51BQ86UW2 128 aa11.89□□□□□ -0.51
CHD1L-209ENST00000492728 RNASE7Q9H1E1 156 aaKnown RBP11.89□□□□□ -0.51
CHD1L-209ENST00000492728 DPH3P1Q9H4G8 78 aa11.89□□□□□ -0.51
CHD1L-209ENST00000492728 HMCN2Q8NDA2 5059 aa11.88□□□□□ -0.51
CHD1L-209ENST00000492728 REG3AQ06141 175 aa11.88□□□□□ -0.51
CHD1L-209ENST00000492728 C9orf62Q8N4C0 152 aa11.88□□□□□ -0.51
CHD1L-209ENST00000492728 CNFNQ9BYD5 112 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 73.9 ms